Submissions for variant NM_170665.4(ATP2A2):c.1420-8C>G

gnomAD frequency: 0.02475  dbSNP: rs112499287

Total submissions: 5

Submitter	RCV	SCV	Clinical significance	Condition	Last evaluated	Review status	Method	Comment
Illumina Laboratory Services, Illumina	RCV000267776	SCV000376238	benign	Keratosis follicularis	2018-01-12	criteria provided, single submitter	clinical testing	This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
Invitae	RCV000953488	SCV001100061	benign	not provided	2024-01-12	criteria provided, single submitter	clinical testing
Genome-Nilou Lab	RCV002259839	SCV002539131	benign	Acrokeratosis verruciformis of Hopf	2021-12-05	criteria provided, single submitter	clinical testing
Genome-Nilou Lab	RCV000267776	SCV002539133	benign	Keratosis follicularis	2021-12-05	criteria provided, single submitter	clinical testing
PreventionGenetics, part of Exact Sciences	RCV003920269	SCV004734800	benign	ATP2A2-related condition	2020-02-18	criteria provided, single submitter	clinical testing	This variant is classified as benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).