ClinVar Miner

Submissions for variant NM_174878.3(CLRN1):c.148_149insTGTC (p.Ser50fs)

gnomAD frequency: 0.00014  dbSNP: rs762606406
Minimum review status: Collection method:
Minimum conflict level:
ClinVar version:
Total submissions: 4
Download table as spreadsheet
Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Institute of Medical Genetics and Applied Genomics, University Hospital Tübingen RCV001682645 SCV001905532 pathogenic not provided 2021-09-15 criteria provided, single submitter clinical testing
Fulgent Genetics, Fulgent Genetics RCV002506728 SCV002808760 pathogenic Retinitis pigmentosa; Retinitis pigmentosa 61; Usher syndrome type 3A 2022-05-17 criteria provided, single submitter clinical testing
Institute of Human Genetics, Univ. Regensburg, Univ. Regensburg RCV004815586 SCV005073060 pathogenic Retinal dystrophy 2022-01-01 criteria provided, single submitter clinical testing
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV004770188 SCV005380761 pathogenic Usher syndrome 2024-08-09 criteria provided, single submitter clinical testing Variant summary: CLRN1 c.148_149insTGTC (p.Ser50LeufsX12) results in a premature termination codon, predicted to cause a truncation of the encoded protein or absence of the protein due to nonsense mediated decay, which are commonly known mechanisms for disease. The variant allele was found at a frequency of 9.5e-05 in 251458 control chromosomes. This frequency is not significantly higher than estimated for a pathogenic variant in CLRN1 causing Usher Syndrome (9.5e-05 vs 0.0014), allowing no conclusion about variant significance. c.148_149insTGTC has been reported in the literature in individuals affected with Usher Syndrome. These data indicate that the variant may be associated with disease. To our knowledge, no experimental evidence demonstrating an impact on protein function has been reported. The following publication have been ascertained in the context of this evaluation (PMID: 22135276). ClinVar contains an entry for this variant (Variation ID: 1275768). Based on the evidence outlined above, the variant was classified as pathogenic.

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.