ClinVar Miner

Submissions for variant NM_177400.3(NKX6-2):c.196del (p.Arg66fs)

dbSNP: rs1554961118
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000599464 SCV000710169 pathogenic not provided 2023-05-26 criteria provided, single submitter clinical testing Frameshift variant predicted to result in protein truncation, as the last 212 amino acids are replaced with 121 different amino acids, and other loss-of-function variants have been reported downstream in HGMD; Not observed at significant frequency in large population cohorts (gnomAD); This variant is associated with the following publications: (PMID: 29388673, 32860008, 28940097, 31509304)
Centogene AG - the Rare Disease Company RCV000723340 SCV001426486 likely pathogenic Spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy criteria provided, single submitter clinical testing
Center for Genomic Medicine, King Faisal Specialist Hospital and Research Center RCV000723340 SCV004807521 pathogenic Spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy 2024-03-29 criteria provided, single submitter clinical testing
Biochemical Molecular Genetic Laboratory, King Abdulaziz Medical City RCV000723340 SCV000854738 pathogenic Spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy 2018-06-28 no assertion criteria provided clinical testing
GeneReviews RCV000723340 SCV000902483 not provided Spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy no assertion provided literature only
Yale Center for Mendelian Genomics, Yale University RCV000723340 SCV002106665 pathogenic Spastic ataxia 8, autosomal recessive, with hypomyelinating leukodystrophy 2020-02-27 no assertion criteria provided literature only

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