ClinVar Miner

Submissions for variant NM_177438.3(DICER1):c.3427C>A (p.Leu1143Ile)

gnomAD frequency: 0.00002  dbSNP: rs375211466
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001063232 SCV001228069 uncertain significance DICER1-related tumor predisposition 2023-04-19 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt DICER1 protein function. ClinVar contains an entry for this variant (Variation ID: 857537). This variant has not been reported in the literature in individuals affected with DICER1-related conditions. This variant is present in population databases (rs375211466, gnomAD 0.01%). This sequence change replaces leucine, which is neutral and non-polar, with isoleucine, which is neutral and non-polar, at codon 1143 of the DICER1 protein (p.Leu1143Ile).
Ambry Genetics RCV002451271 SCV002615550 uncertain significance Hereditary cancer-predisposing syndrome 2022-06-29 criteria provided, single submitter clinical testing The p.L1143I variant (also known as c.3427C>A), located in coding exon 20 of the DICER1 gene, results from a C to A substitution at nucleotide position 3427. The leucine at codon 1143 is replaced by isoleucine, an amino acid with highly similar properties. This amino acid position is not well conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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