ClinVar Miner

Submissions for variant NM_177438.3(DICER1):c.4007del (p.Pro1336fs)

dbSNP: rs1891071442
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001039224 SCV001202742 pathogenic DICER1-related tumor predisposition 2019-06-09 criteria provided, single submitter clinical testing This sequence change creates a premature translational stop signal (p.Pro1336Leufs*11) in the DICER1 gene. It is expected to result in an absent or disrupted protein product. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals with DICER1-related conditions. Loss-of-function variants in DICER1 are known to be pathogenic (PMID: 19556464, 21266384). For these reasons, this variant has been classified as Pathogenic.
Foulkes Cancer Genetics LDI, Lady Davis Institute for Medical Research RCV001039224 SCV001372018 pathogenic DICER1-related tumor predisposition 2019-07-01 criteria provided, single submitter curation ACMG criteria met: PVS1, PM2, PP4
Ambry Genetics RCV002372764 SCV002625369 pathogenic Hereditary cancer-predisposing syndrome 2021-12-23 criteria provided, single submitter clinical testing The c.4007delC pathogenic mutation, located in coding exon 20 of the DICER1 gene, results from a deletion of one nucleotide at nucleotide position 4007, causing a translational frameshift with a predicted alternate stop codon (p.P1336Lfs*11). This alteration has been identified as a de novo finding in a child with mesenchymal hamartoma of the liver, thyroid nodules and follicular thyroid adenoma (Apellaniz-Ruiz M et al. N Engl J Med, 2019 05;380:1834-1842). This alteration is expected to result in loss of function by premature protein truncation or nonsense-mediated mRNA decay. As such, this alteration is interpreted as a disease-causing mutation.

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