ClinVar Miner

Submissions for variant NM_181486.4(TBX5):c.786C>T (p.Thr262=)

gnomAD frequency: 0.00006  dbSNP: rs375955080
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Total submissions: 10
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000314668 SCV000344098 benign not specified 2016-09-02 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000360501 SCV000376503 likely benign Holt-Oram syndrome 2017-04-28 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases allowed determination this variant is unlikely to cause disease. Therefore, this variant is classified as likely benign.
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV000360501 SCV000745546 benign Holt-Oram syndrome 2015-09-21 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV001514005 SCV001721736 benign Aortic valve disease 2 2024-10-30 criteria provided, single submitter clinical testing
GeneDx RCV000864590 SCV001864327 benign not provided 2015-03-03 criteria provided, single submitter clinical testing
Ambry Genetics RCV002411176 SCV002676813 likely benign Cardiovascular phenotype 2019-12-23 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
CeGaT Center for Human Genetics Tuebingen RCV000864590 SCV004132003 likely benign not provided 2023-01-01 criteria provided, single submitter clinical testing TBX5: BP4, BP7
Breakthrough Genomics, Breakthrough Genomics RCV000864590 SCV005218845 likely benign not provided criteria provided, single submitter not provided
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen RCV000360501 SCV000733136 benign Holt-Oram syndrome no assertion criteria provided clinical testing
PreventionGenetics, part of Exact Sciences RCV003930176 SCV004737846 benign TBX5-related disorder 2019-11-04 no assertion criteria provided clinical testing This variant is classified as benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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