ClinVar Miner

Submissions for variant NM_182961.4(SYNE1):c.25213G>T (p.Val8405Phe)

gnomAD frequency: 0.00004  dbSNP: rs757463285
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001203245 SCV001374401 uncertain significance Autosomal recessive ataxia, Beauce type; Emery-Dreifuss muscular dystrophy 4, autosomal dominant 2023-12-06 criteria provided, single submitter clinical testing This sequence change replaces valine, which is neutral and non-polar, with phenylalanine, which is neutral and non-polar, at codon 8357 of the SYNE1 protein (p.Val8357Phe). This variant is present in population databases (rs757463285, gnomAD 0.02%). This variant has not been reported in the literature in individuals affected with SYNE1-related conditions. ClinVar contains an entry for this variant (Variation ID: 934780). An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be tolerated. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Revvity Omics, Revvity RCV003142130 SCV003824016 uncertain significance not provided 2019-10-03 criteria provided, single submitter clinical testing

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