ClinVar Miner

Submissions for variant NM_182961.4(SYNE1):c.25717A>G (p.Lys8573Glu)

dbSNP: rs1562922141
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Genomic Research Center, Shahid Beheshti University of Medical Sciences RCV000785035 SCV000923588 uncertain significance Autosomal recessive ataxia, Beauce type 2019-01-01 criteria provided, single submitter research
Invitae RCV002535713 SCV003013016 uncertain significance Autosomal recessive ataxia, Beauce type; Emery-Dreifuss muscular dystrophy 4, autosomal dominant 2022-06-07 criteria provided, single submitter clinical testing This sequence change replaces lysine, which is basic and polar, with glutamic acid, which is acidic and polar, at codon 8525 of the SYNE1 protein (p.Lys8525Glu). This variant is not present in population databases (gnomAD no frequency). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Possibly Damaging"; Align-GVGD: "Class C0"). ClinVar contains an entry for this variant (Variation ID: 634535). This variant has not been reported in the literature in individuals affected with SYNE1-related conditions.

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