ClinVar Miner

Submissions for variant NM_194248.3(OTOF):c.4642G>A (p.Glu1548Lys)

gnomAD frequency: 0.00010  dbSNP: rs146982209
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000615518 SCV000711173 uncertain significance not specified 2017-05-02 criteria provided, single submitter clinical testing Variant classified as Uncertain Significance - Favor Benign. The p.Glu1548Lys va riant in OTOF has not been previously reported in individuals with hearing loss, but has been identified in 0.21% (64/30778) of South Asian chromosomes by the g enome Aggregation Database (gnomAD, http://gnomad.broadinstitute.org/; dbSNP rs1 46982209). Although this variant has been seen in the general population, its fr equency is not high enough to rule out a pathogenic role. Computational predicti on tools and conservation analysis suggest that the p.Glu1548Lys variant may imp act the protein, though this information is not predictive enough to determine p athogenicity. In summary, while the clinical significance of the p.Glu1548Lys va riant is uncertain, its frequency in the general population suggests that it is more likely to be benign.
Illumina Laboratory Services, Illumina RCV001136794 SCV001296664 uncertain significance Autosomal recessive nonsyndromic hearing loss 9 2017-04-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases did not allow this variant to be ruled in or out of causing disease. Therefore, this variant is classified as a variant of unknown significance.
Invitae RCV002062119 SCV002394518 likely benign not provided 2024-01-29 criteria provided, single submitter clinical testing

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