ClinVar Miner

Submissions for variant NM_198253.3(TERT):c.336dup (p.Glu113fs)

dbSNP: rs1060502990
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV002525584 SCV000551487 pathogenic Dyskeratosis congenita, autosomal dominant 2; Idiopathic Pulmonary Fibrosis 2023-07-28 criteria provided, single submitter clinical testing This sequence change creates a premature translational stop signal (p.Glu113Argfs*79) in the TERT gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in TERT are known to be pathogenic (PMID: 16247010, 17460043). The frequency data for this variant in the population databases is considered unreliable, as metrics indicate poor data quality at this position in the gnomAD database. This premature translational stop signal has been observed in individual(s) with chronic hypersensitivity pneumonitis (PMID: 31268371). ClinVar contains an entry for this variant (Variation ID: 410651). For these reasons, this variant has been classified as Pathogenic.
Fulgent Genetics, Fulgent Genetics RCV002481460 SCV002777968 likely pathogenic Interstitial lung disease 2; Aplastic anemia; Dyskeratosis congenita, autosomal dominant 1; Acute myeloid leukemia; Dyskeratosis congenita, autosomal dominant 2; Pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1; Melanoma, cutaneous malignant, susceptibility to, 9 2021-10-11 criteria provided, single submitter clinical testing
Garcia Pulmonary Genetics Research Laboratory, Columbia University Irving Medical Center RCV002509393 SCV002547347 likely risk allele Pulmonary fibrosis 2022-06-09 no assertion criteria provided research Leukocyte telomere length (by qPCR) less than 10th percentile age-adjusted

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