ClinVar Miner

Submissions for variant NM_198576.4(AGRN):c.2659G>T (p.Gly887Cys)

gnomAD frequency: 0.00001  dbSNP: rs373631709
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001048778 SCV001212798 uncertain significance Congenital myasthenic syndrome 8 2022-01-13 criteria provided, single submitter clinical testing This sequence change replaces glycine, which is neutral and non-polar, with cysteine, which is neutral and slightly polar, at codon 887 of the AGRN protein (p.Gly887Cys). This variant is present in population databases (rs373631709, gnomAD 0.01%). This variant has not been reported in the literature in individuals affected with AGRN-related conditions. ClinVar contains an entry for this variant (Variation ID: 845666). Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002552651 SCV003540519 uncertain significance Inborn genetic diseases 2022-08-17 criteria provided, single submitter clinical testing The c.2659G>T (p.G887C) alteration is located in exon 15 (coding exon 15) of the AGRN gene. This alteration results from a G to T substitution at nucleotide position 2659, causing the glycine (G) at amino acid position 887 to be replaced by a cysteine (C). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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