ClinVar Miner

Submissions for variant NM_198578.4(LRRK2):c.713A>T (p.Asn238Ile)

gnomAD frequency: 0.00001  dbSNP: rs28365216
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000032507 SCV003285109 uncertain significance Autosomal dominant Parkinson disease 8 2023-11-17 criteria provided, single submitter clinical testing This sequence change replaces asparagine, which is neutral and polar, with isoleucine, which is neutral and non-polar, at codon 238 of the LRRK2 protein (p.Asn238Ile). This variant is present in population databases (rs28365216, gnomAD 0.02%). This missense change has been observed in individual(s) with Parkinsons disease, as well as unaffeced individuals (PMID: 21885347, 24565865). ClinVar contains an entry for this variant (Variation ID: 39233). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) has been performed at Invitae for this missense variant, however the output from this modeling did not meet the statistical confidence thresholds required to predict the impact of this variant on LRRK2 protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
GeneReviews RCV000032507 SCV000056170 not provided Autosomal dominant Parkinson disease 8 no assertion provided literature only

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