ClinVar Miner

Submissions for variant NM_201590.3(CACNB2):c.2T>C (p.Met1Thr)

gnomAD frequency: 0.00001  dbSNP: rs1401122407
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000527613 SCV000647069 uncertain significance Brugada syndrome 4 2017-03-16 criteria provided, single submitter clinical testing This variant is not present in population databases (ExAC no frequency) and has not been reported in the literature in individuals with a CACNB2-related disease. The current clinical and genetic evidence is not sufficient to establish whether loss-of-function variants in CACNB2 cause disease. Therefore, this variant has been classified as a Variant of Uncertain Significance. This sequence change affects the initiator methionine of the CACNB2 mRNA and is predicted to result in an absent or truncated protein.
Ambry Genetics RCV004024095 SCV005031643 uncertain significance Cardiovascular phenotype 2023-09-29 criteria provided, single submitter clinical testing The p.M1? variant (also known as c.2T>C) is located in coding exon 1 of the CACNB2 gene and results from a T to C substitution at nucleotide position 2. This alters the methionine residue at the initiation codon (ATG). This amino acid position is highly conserved in available vertebrate species. Variations that modify the initiation codon (ATG) are expected to result in either loss of translation initiation, N-terminal truncation, or cause a shift in the mRNA reading frame. However, loss of function of CACNB2 has not been established as a mechanism of disease. The evidence for this gene-disease relationship is limited; therefore, the clinical significance of this alteration is unclear.

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