ClinVar Miner

Submissions for variant NM_201596.3(CACNB2):c.1018G>A (p.Ala340Thr)

gnomAD frequency: 0.00006  dbSNP: rs140614930
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000695562 SCV000824071 uncertain significance Brugada syndrome 4 2023-01-26 criteria provided, single submitter clinical testing This variant is present in population databases (rs140614930, gnomAD 0.01%). This sequence change replaces alanine, which is neutral and non-polar, with threonine, which is neutral and polar, at codon 286 of the CACNB2 protein (p.Ala286Thr). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt CACNB2 protein function. ClinVar contains an entry for this variant (Variation ID: 573799). This variant has not been reported in the literature in individuals affected with CACNB2-related conditions.
Ambry Genetics RCV002406597 SCV002676237 likely benign Cardiovascular phenotype 2022-06-28 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Fulgent Genetics, Fulgent Genetics RCV000695562 SCV002783284 uncertain significance Brugada syndrome 4 2021-09-22 criteria provided, single submitter clinical testing

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