List of variants in gene SLC9A6 reported as likely benign for Christianson syndrome

Minimum submission review status:		Collection method:
Minimum conflict level: Report conflict between different conditions
Gene type: Distinguish antisense genes from sense genes
Show significances as they were submitted (without aggregation into standard terms)
		ClinVar version:

Total variants: 140

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HGVS	dbSNP	gnomAD frequency
NM_001379110.1(SLC9A6):c.1460+6T>C	rs781963949	0.00047
NM_001379110.1(SLC9A6):c.1661+18A>G	rs782141247	0.00018
NM_001379110.1(SLC9A6):c.852A>T (p.Ala284=)	rs371472909	0.00015
NM_001379110.1(SLC9A6):c.-9G>T	rs367724979	0.00009
NM_001379110.1(SLC9A6):c.1734C>T (p.Ile578=)	rs375760367	0.00008
NM_001379110.1(SLC9A6):c.1287A>G (p.Gln429=)	rs142161862	0.00007
NM_001379110.1(SLC9A6):c.1551-11T>C	rs147479371	0.00007
NM_001379110.1(SLC9A6):c.1081-18T>C	rs376479501	0.00006
NM_001379110.1(SLC9A6):c.228T>C (p.Asn76=)	rs782529317	0.00006
NM_001379110.1(SLC9A6):c.1119C>T (p.Ile373=)	rs140158476	0.00005
NM_001379110.1(SLC9A6):c.448-9_448-8insC	rs781959681	0.00005
NM_001379110.1(SLC9A6):c.744-7T>C	rs1556618483	0.00005
NM_001379110.1(SLC9A6):c.1307-17T>C	rs1212441893	0.00004
NM_001379110.1(SLC9A6):c.1434T>C (p.Thr478=)	rs1057520374	0.00004
NM_001379110.1(SLC9A6):c.15C>G (p.Ile5Met)	rs782296172	0.00004
NM_001379110.1(SLC9A6):c.-16C>T	rs139299794	0.00003
NM_001379110.1(SLC9A6):c.1582-9T>C	rs782039050	0.00003
NM_001379110.1(SLC9A6):c.504A>G (p.Ala168=)	rs782010755	0.00003
NM_001379110.1(SLC9A6):c.1170C>T (p.Asn390=)	rs781953296	0.00002
NM_001379110.1(SLC9A6):c.1428C>T (p.Gly476=)	rs782370742	0.00002
NM_001379110.1(SLC9A6):c.1551-18T>G	rs782056708	0.00002
NM_001379110.1(SLC9A6):c.1581+17G>A	rs917623322	0.00002
NM_001379110.1(SLC9A6):c.1599A>C (p.Glu533Asp)	rs781949645	0.00002
NM_001379110.1(SLC9A6):c.1833A>T (p.Thr611=)	rs782629258	0.00002
NM_001379110.1(SLC9A6):c.1844C>T (p.Ser615Phe)	rs782178607	0.00002
NM_001379110.1(SLC9A6):c.1862C>T (p.Pro621Leu)	rs782442071	0.00002
NM_001379110.1(SLC9A6):c.213G>A (p.Pro71=)	rs782600941	0.00002
NM_001379110.1(SLC9A6):c.483A>G (p.Ala161=)	rs781961294	0.00002
NM_001379110.1(SLC9A6):c.525G>A (p.Gly175=)	rs143859232	0.00002
NM_001379110.1(SLC9A6):c.594A>G (p.Thr198=)	rs782072028	0.00002
NM_001379110.1(SLC9A6):c.637+12del	rs782060423	0.00002
NM_001379110.1(SLC9A6):c.743+11G>C	rs1556617460	0.00002
NM_001379110.1(SLC9A6):c.933C>A (p.Gly311=)	rs1312175298	0.00002
NM_001379110.1(SLC9A6):c.1038G>T (p.Thr346=)	rs782783023	0.00001
NM_001379110.1(SLC9A6):c.1081-7G>A	rs1556619293	0.00001
NM_001379110.1(SLC9A6):c.1081-8C>T	rs1060504684	0.00001
NM_001379110.1(SLC9A6):c.1143G>A (p.Leu381=)	rs782501407	0.00001
NM_001379110.1(SLC9A6):c.1227T>C (p.Ile409=)	rs1556620031	0.00001
NM_001379110.1(SLC9A6):c.1380C>T (p.Ser460=)	rs782177396	0.00001
NM_001379110.1(SLC9A6):c.1578C>T (p.His526=)	rs782430960	0.00001
NM_001379110.1(SLC9A6):c.1581+15T>C	rs990491678	0.00001
NM_001379110.1(SLC9A6):c.1768-6A>G	rs1556623179	0.00001
NM_001379110.1(SLC9A6):c.1839A>T (p.Gly613=)	rs1556623192	0.00001
NM_001379110.1(SLC9A6):c.1863G>A (p.Pro621=)	rs782665428	0.00001
NM_001379110.1(SLC9A6):c.2001G>A (p.Pro667=)	rs782708610	0.00001
NM_001379110.1(SLC9A6):c.448-8_448-7insG	rs782131315	0.00001
NM_001379110.1(SLC9A6):c.471G>A (p.Gly157=)	rs1292220528	0.00001
NM_001379110.1(SLC9A6):c.516C>T (p.Phe172=)	rs1423014570	0.00001
NM_001379110.1(SLC9A6):c.517G>A (p.Val173Ile)	rs782117973	0.00001
NM_001379110.1(SLC9A6):c.549G>A (p.Thr183=)	rs782386487	0.00001
NM_001379110.1(SLC9A6):c.603A>G (p.Leu201=)	rs1060504685	0.00001
NM_001379110.1(SLC9A6):c.630T>C (p.Thr210=)	rs1556617019	0.00001
NM_001379110.1(SLC9A6):c.638-5A>G	rs1057520615	0.00001
NM_001379110.1(SLC9A6):c.756A>G (p.Ala252=)	rs1556618492	0.00001
NM_001379110.1(SLC9A6):c.801G>A (p.Ala267=)	rs185192141	0.00001
NM_001379110.1(SLC9A6):c.-13A>C
NM_001379110.1(SLC9A6):c.-19C>A	rs1030979223
NM_001379110.1(SLC9A6):c.-1C>T	rs911499882
NM_001379110.1(SLC9A6):c.-25C>T
NM_001379110.1(SLC9A6):c.-56-17T>G
NM_001379110.1(SLC9A6):c.-56-32G>A	rs2148129449
NM_001379110.1(SLC9A6):c.-56-7C>A
NM_001379110.1(SLC9A6):c.1006T>C (p.Leu336=)	rs1556618895
NM_001379110.1(SLC9A6):c.1038G>A (p.Thr346=)	rs782783023
NM_001379110.1(SLC9A6):c.1080+17A>G	rs2070960570
NM_001379110.1(SLC9A6):c.1080+7G>A
NM_001379110.1(SLC9A6):c.1128C>T (p.Tyr376=)
NM_001379110.1(SLC9A6):c.1164C>T (p.Val388=)	rs1556619315
NM_001379110.1(SLC9A6):c.1195-13T>C
NM_001379110.1(SLC9A6):c.1195-9T>C
NM_001379110.1(SLC9A6):c.1278A>G (p.Ser426=)
NM_001379110.1(SLC9A6):c.1306+15_1306+18del
NM_001379110.1(SLC9A6):c.1306+16C>G
NM_001379110.1(SLC9A6):c.1307-19C>T	rs2148189827
NM_001379110.1(SLC9A6):c.1307-20C>T
NM_001379110.1(SLC9A6):c.1338C>T (p.Ala446=)
NM_001379110.1(SLC9A6):c.1359T>C (p.Tyr453=)
NM_001379110.1(SLC9A6):c.1460+20C>T
NM_001379110.1(SLC9A6):c.1551-19C>T
NM_001379110.1(SLC9A6):c.1551-6C>T
NM_001379110.1(SLC9A6):c.1551-9C>G
NM_001379110.1(SLC9A6):c.1566A>C (p.Ser522=)	rs781843930
NM_001379110.1(SLC9A6):c.1572A>G (p.Gln524=)
NM_001379110.1(SLC9A6):c.15C>A (p.Ile5=)
NM_001379110.1(SLC9A6):c.1638G>A (p.Arg546=)	rs2148201776
NM_001379110.1(SLC9A6):c.1662-6C>T
NM_001379110.1(SLC9A6):c.169+14C>G	rs1556614871
NM_001379110.1(SLC9A6):c.169+14C>T
NM_001379110.1(SLC9A6):c.169+15C>T
NM_001379110.1(SLC9A6):c.169+18T>C
NM_001379110.1(SLC9A6):c.1698G>A (p.Pro566=)	rs1060504687
NM_001379110.1(SLC9A6):c.170-11C>T
NM_001379110.1(SLC9A6):c.1728A>G (p.Gly576=)	rs2148211280
NM_001379110.1(SLC9A6):c.1746C>G (p.Leu582=)
NM_001379110.1(SLC9A6):c.1764C>T (p.Tyr588=)	rs2071482902
NM_001379110.1(SLC9A6):c.1767+12T>G
NM_001379110.1(SLC9A6):c.1767+9G>A
NM_001379110.1(SLC9A6):c.1768-13T>A
NM_001379110.1(SLC9A6):c.1770C>T (p.Asn590=)
NM_001379110.1(SLC9A6):c.1857T>C (p.Thr619=)	rs398124223
NM_001379110.1(SLC9A6):c.1869A>T (p.Thr623=)	rs2071565905
NM_001379110.1(SLC9A6):c.1875C>T (p.Ser625=)
NM_001379110.1(SLC9A6):c.1900A>G (p.Ser634Gly)
NM_001379110.1(SLC9A6):c.1953C>T (p.Val651=)
NM_001379110.1(SLC9A6):c.1992T>G (p.Ser664=)	rs782053418
NM_001379110.1(SLC9A6):c.2019T>C (p.Asn673=)	rs1603225936
NM_001379110.1(SLC9A6):c.2031T>A (p.Gly677=)	rs1603225948
NM_001379110.1(SLC9A6):c.2037C>T (p.Ala679=)
NM_001379110.1(SLC9A6):c.2039A>G (p.Ter680=)
NM_001379110.1(SLC9A6):c.206A>G (p.His69Arg)	rs1060502675
NM_001379110.1(SLC9A6):c.261A>G (p.Pro87=)	rs2148144184
NM_001379110.1(SLC9A6):c.283A>G (p.Ser95Gly)
NM_001379110.1(SLC9A6):c.290A>G (p.Lys97Arg)	rs2148144215
NM_001379110.1(SLC9A6):c.372T>A (p.Val124=)	rs2148149814
NM_001379110.1(SLC9A6):c.42C>T (p.Ser14=)	rs1057523594
NM_001379110.1(SLC9A6):c.447+20A>C	rs2089532535
NM_001379110.1(SLC9A6):c.447+20A>G
NM_001379110.1(SLC9A6):c.450A>G (p.Arg150=)
NM_001379110.1(SLC9A6):c.459T>C (p.Phe153=)
NM_001379110.1(SLC9A6):c.471G>T (p.Gly157=)	rs1292220528
NM_001379110.1(SLC9A6):c.492T>C (p.Phe164=)
NM_001379110.1(SLC9A6):c.524+8_524+12del	rs782802858
NM_001379110.1(SLC9A6):c.54C>T (p.Asp18=)
NM_001379110.1(SLC9A6):c.601C>T (p.Leu201=)
NM_001379110.1(SLC9A6):c.609T>C (p.Phe203=)
NM_001379110.1(SLC9A6):c.637+16G>A
NM_001379110.1(SLC9A6):c.638-18A>C
NM_001379110.1(SLC9A6):c.638-8C>T	rs2148156491
NM_001379110.1(SLC9A6):c.657C>T (p.Phe219=)
NM_001379110.1(SLC9A6):c.660C>T (p.His220=)
NM_001379110.1(SLC9A6):c.663G>A (p.Glu221=)
NM_001379110.1(SLC9A6):c.717T>C (p.Asn239=)	rs2089593239
NM_001379110.1(SLC9A6):c.744-12T>C
NM_001379110.1(SLC9A6):c.819G>A (p.Gly273=)
NM_001379110.1(SLC9A6):c.828T>C (p.Leu276=)
NM_001379110.1(SLC9A6):c.885+10T>C	rs782141848
NM_001379110.1(SLC9A6):c.886-17A>G	rs2070950996
NM_001379110.1(SLC9A6):c.936G>C (p.Leu312=)
NM_001379110.1(SLC9A6):c.960C>G (p.Thr320=)	rs1060504686
NM_001379110.1(SLC9A6):c.991+15C>G	rs2148174041

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