ClinVar Miner

List of variants reported as benign for Familial adenomatous polyposis 1

Minimum submission review status: Collection method:
Minimum conflict level:
ClinVar version:
Total variants: 231
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HGVS dbSNP gnomAD frequency
NM_000038.6(APC):c.5465T>A (p.Val1822Asp) rs459552 0.82099
NM_000038.6(APC):c.5034G>A (p.Gly1678=) rs42427 0.59504
NM_000038.6(APC):c.5880G>A (p.Pro1960=) rs465899 0.59308
NM_000038.6(APC):c.5268T>G (p.Ser1756=) rs866006 0.59230
NM_000038.6(APC):c.4479G>A (p.Thr1493=) rs41115 0.59177
NM_000038.6(APC):c.1635G>A (p.Ala545=) rs351771 0.59150
NM_000038.6(APC):c.1458T>C (p.Tyr486=) rs2229992 0.46792
NM_001127511.3(APC):c.-31T>G rs78429131 0.09154
NM_000038.6(APC):c.136-53T>C rs2304793 0.07347
NM_000038.6(APC):c.*86C>A rs1804197 0.07244
NM_000038.5(APC):c.-30569A>G rs13180781 0.06995
NM_000038.6(APC):c.645+32C>T rs2909961 0.06662
NM_001354897.2(APC):c.-245A>C rs75580617 0.04642
NM_001127511.3(APC):c.166-29015A>T rs75581138 0.04169
NM_000038.6(APC):c.7704A>G (p.Gly2568=) rs35043160 0.02992
NM_000038.6(APC):c.7504G>A (p.Gly2502Ser) rs2229995 0.01693
NM_000038.6(APC):c.3732A>G (p.Gln1244=) rs74380081 0.01174
NM_000038.6(APC):c.1695A>G (p.Glu565=) rs77921116 0.01170
NM_000038.6(APC):c.730-29A>T rs75083764 0.01144
NM_000038.6(APC):c.7201C>T (p.Leu2401=) rs2229994 0.01134
NM_001354897.2(APC):c.-240G>C rs59923692 0.01117
NM_001354897.2(APC):c.-241delA rs201014315 0.01117
NM_000038.6(APC):c.645+61C>T rs56328836 0.01110
NM_001127511.3(APC):c.78C>A (p.Ser26Arg) rs113782655 0.00928
NM_000038.6(APC):c.2608C>T (p.Pro870Ser) rs33974176 0.00917
NM_001127511.3(APC):c.-152C>T rs138386816 0.00719
NM_000038.6(APC):c.4326T>A (p.Pro1442=) rs67622085 0.00705
NM_000038.6(APC):c.5265G>A (p.Ala1755=) rs34506289 0.00675
NM_000038.6(APC):c.1959G>A (p.Arg653=) rs72541809 0.00583
NM_000038.6(APC):c.3949G>C (p.Glu1317Gln) rs1801166 0.00570
NM_001127511.3(APC):c.166-28546T>C rs113017087 0.00548
NM_000038.6(APC):c.1958+8T>C rs62626346 0.00510
NM_000038.6(APC):c.5250C>G (p.Val1750=) rs2229997 0.00497
NM_001127511.3(APC):c.-181C>T rs115658307 0.00491
NM_000038.6(APC):c.*248A>G rs186777258 0.00487
NM_000038.6(APC):c.1408+792A>T rs77551834 0.00469
NM_000038.6(APC):c.933+30A>G rs145211300 0.00412
NM_000038.6(APC):c.729+23T>C rs75111475 0.00381
NM_000038.6(APC):c.7862C>G (p.Ser2621Cys) rs72541816 0.00358
NM_000038.6(APC):c.4420G>A (p.Ala1474Thr) rs139387758 0.00324
NM_000038.6(APC):c.3471G>A (p.Glu1157=) rs143927847 0.00308
NM_000038.6(APC):c.3165A>T (p.Ile1055=) rs61734287 0.00286
NM_000038.6(APC):c.4360A>G (p.Lys1454Glu) rs111866410 0.00271
NM_000038.6(APC):c.4893T>C (p.Ser1631=) rs35634377 0.00268
NM_000038.6(APC):c.3264G>A (p.Lys1088=) rs114774495 0.00255
NM_000038.6(APC):c.3386T>C (p.Leu1129Ser) rs143638171 0.00250
NM_000038.6(APC):c.705A>G (p.Leu235=) rs147036141 0.00213
NM_000038.6(APC):c.120G>A (p.Glu40=) rs142720069 0.00161
NM_000038.6(APC):c.8068G>A (p.Ala2690Thr) rs140868933 0.00146
NM_000038.6(APC):c.6921G>A (p.Ser2307=) rs2229993 0.00143
NM_000038.6(APC):c.423-17T>A rs534684461 0.00114
NM_000038.6(APC):c.423-16A>T rs78919815 0.00101
NM_000038.6(APC):c.5790A>G (p.Gln1930=) rs141152252 0.00097
NM_000038.6(APC):c.1825G>A (p.Val609Ile) rs147863331 0.00096
NM_000038.6(APC):c.2262T>G (p.Val754=) rs148987776 0.00096
NM_000038.6(APC):c.7514G>A (p.Arg2505Gln) rs147549623 0.00093
NM_000038.6(APC):c.8043G>C (p.Pro2681=) rs149347068 0.00092
NM_000038.6(APC):c.6821C>T (p.Ala2274Val) rs34919187 0.00088
NM_000038.6(APC):c.1604C>T (p.Ser535Phe) rs75870842 0.00071
NM_000038.5(APC):c.-30467A>G rs190326008 0.00064
NM_000038.6(APC):c.3173A>G (p.Asp1058Gly) rs148725540 0.00056
NM_000038.6(APC):c.4336G>A (p.Ala1446Thr) rs146572883 0.00056
NM_000038.6(APC):c.2476T>G (p.Leu826Val) rs145245264 0.00054
NM_000038.6(APC):c.1240C>T (p.Arg414Cys) rs137854567 0.00053
NM_000038.6(APC):c.3963C>T (p.Ser1321=) rs150595875 0.00051
NM_000038.6(APC):c.3739G>A (p.Ala1247Thr) rs148223181 0.00050
NM_000038.6(APC):c.295C>T (p.Arg99Trp) rs139196838 0.00048
NM_001127511.3(APC):c.-166C>T rs904001781 0.00043
NM_000038.6(APC):c.2322C>T (p.Asp774=) rs145792879 0.00041
NM_000038.6(APC):c.2805C>T (p.Tyr935=) rs137854575 0.00040
NM_000038.6(APC):c.2847G>T (p.Met949Ile) rs147394539 0.00039
NM_000038.6(APC):c.3650A>C (p.Asn1217Thr) rs138933660 0.00038
NM_000038.6(APC):c.5690A>C (p.His1897Pro) rs112610898 0.00038
NM_000038.6(APC):c.6857C>T (p.Ala2286Val) rs200587641 0.00036
NM_000038.6(APC):c.607C>G (p.Gln203Glu) rs141576417 0.00034
NM_000038.6(APC):c.2232T>G (p.Ser744=) rs145751759 0.00032
NM_000038.6(APC):c.4905G>A (p.Gly1635=) rs137988845 0.00031
NM_000038.6(APC):c.7490C>T (p.Ser2497Leu) rs141010008 0.00031
NM_000038.6(APC):c.2593C>T (p.Pro865Ser) rs192620988 0.00028
NM_000038.6(APC):c.3511C>T (p.Arg1171Cys) rs201830995 0.00028
NM_000038.6(APC):c.5274T>A (p.Ser1758=) rs199600387 0.00024
NM_000038.6(APC):c.6526T>C (p.Leu2176=) rs183468041 0.00023
NM_000038.6(APC):c.7036C>T (p.Pro2346Ser) rs200756935 0.00022
NM_000038.6(APC):c.1419G>A (p.Gln473=) rs141579422 0.00021
NM_000038.6(APC):c.3352A>G (p.Asn1118Asp) rs140493115 0.00021
NM_000038.6(APC):c.564A>G (p.Gln188=) rs377493489 0.00021
NM_000038.6(APC):c.6782C>T (p.Pro2261Leu) rs376494248 0.00021
NM_000038.6(APC):c.3006C>T (p.Ala1002=) rs72541810 0.00020
NM_000038.6(APC):c.1488A>T (p.Thr496=) rs9282599 0.00019
NM_000038.6(APC):c.2205G>A (p.Ala735=) rs141001261 0.00019
NM_000038.6(APC):c.3249T>G (p.Asp1083Glu) rs201629780 0.00019
NM_000038.6(APC):c.3374T>C (p.Val1125Ala) rs377278397 0.00018
NM_000038.6(APC):c.4237A>G (p.Met1413Val) rs141519952 0.00018
NM_000038.6(APC):c.3479C>A (p.Thr1160Lys) rs201004111 0.00017
NM_000038.5(APC):c.-30632C>T rs185951958 0.00016
NM_000038.6(APC):c.6510A>C (p.Pro2170=) rs138571760 0.00016
NM_000038.6(APC):c.6669A>G (p.Ser2223=) rs372680843 0.00016
NM_000038.6(APC):c.7625A>G (p.Asn2542Ser) rs151163793 0.00016
NM_000038.6(APC):c.6985A>G (p.Ile2329Val) rs146048493 0.00015
NM_000038.6(APC):c.2640C>T (p.Ile880=) rs200184105 0.00014
NM_000038.6(APC):c.6609T>C (p.Val2203=) rs149328018 0.00014
NM_000038.6(APC):c.1548+17T>C rs367690523 0.00013
NM_001127511.3(APC):c.-109C>G rs761634030 0.00013
NM_001127511.3(APC):c.119G>C (p.Ser40Thr) rs587778028 0.00013
NM_000038.6(APC):c.2204C>T (p.Ala735Val) rs147655929 0.00012
NM_000038.6(APC):c.450A>G (p.Lys150=) rs116020626 0.00012
NM_000038.6(APC):c.7137C>G (p.Thr2379=) rs141454910 0.00011
NM_000038.6(APC):c.7621A>G (p.Ile2541Val) rs587778033 0.00011
NM_000038.5(APC):c.-30568T>C rs1218378018 0.00010
NM_000038.6(APC):c.388A>G (p.Ser130Gly) rs150973053 0.00010
NM_000038.6(APC):c.1958+10G>T rs375175370 0.00009
NM_000038.6(APC):c.2586C>G (p.Asn862Lys) rs147972247 0.00009
NM_000038.6(APC):c.5025T>G (p.Val1675=) rs876658169 0.00009
NM_000038.6(APC):c.6525A>G (p.Thr2175=) rs200151646 0.00009
NM_000038.6(APC):c.573T>C (p.Tyr191=) rs185154886 0.00008
NM_000038.6(APC):c.6724A>G (p.Ser2242Gly) rs201375478 0.00008
NM_000038.6(APC):c.934-14C>T rs778707022 0.00007
NM_000038.6(APC):c.1005A>G (p.Leu335=) rs3797704 0.00006
NM_000038.6(APC):c.1139G>A (p.Arg380Gln) rs587782886 0.00006
NM_000038.6(APC):c.5026A>G (p.Arg1676Gly) rs370560998 0.00006
NM_000038.6(APC):c.7399C>A (p.Pro2467Thr) rs372305287 0.00006
NM_000038.6(APC):c.789T>A (p.Gly263=) rs767053295 0.00006
NM_000038.6(APC):c.7929A>G (p.Leu2643=) rs138796072 0.00006
NM_001127511.3(APC):c.125G>A (p.Gly42Asp) rs1057517570 0.00006
NM_000038.6(APC):c.7878T>G (p.Thr2626=) rs757020188 0.00005
NM_000038.6(APC):c.7986G>A (p.Glu2662=) rs571645304 0.00005
NM_000038.6(APC):c.1242C>T (p.Arg414=) rs751423790 0.00004
NM_000038.6(APC):c.1549-13A>T rs587781267 0.00004
NM_000038.6(APC):c.2627G>A (p.Arg876Gln) rs373428732 0.00004
NM_000038.6(APC):c.2838A>G (p.Thr946=) rs142835322 0.00004
NM_000038.6(APC):c.3552C>T (p.Ala1184=) rs759407858 0.00004
NM_000038.6(APC):c.4416A>T (p.Val1472=) rs773352404 0.00004
NM_000038.6(APC):c.6219T>G (p.Gly2073=) rs766559927 0.00004
NM_000038.6(APC):c.6387G>A (p.Ser2129=) rs374310157 0.00004
NM_000038.6(APC):c.6639G>A (p.Met2213Ile) rs35540155 0.00004
NM_000038.6(APC):c.7786T>G (p.Ser2596Ala) rs138137162 0.00004
NM_000038.6(APC):c.8325G>A (p.Gly2775=) rs770719841 0.00004
NM_000038.6(APC):c.995G>A (p.Arg332Gln) rs377665107 0.00004
NM_000038.6(APC):c.1686G>A (p.Thr562=) rs770256026 0.00003
NM_000038.6(APC):c.2090C>T (p.Ala697Val) rs761733547 0.00003
NM_000038.6(APC):c.385G>C (p.Glu129Gln) rs376628500 0.00003
NM_000038.6(APC):c.477C>T (p.Tyr159=) rs863224281 0.00003
NM_000038.6(APC):c.5912C>G (p.Ser1971Cys) rs754691867 0.00003
NM_000038.6(APC):c.6945A>G (p.Gln2315=) rs786201348 0.00003
NM_000038.6(APC):c.7174C>A (p.Pro2392Thr) rs730881257 0.00003
NM_000038.6(APC):c.7731A>G (p.Ser2577=) rs537187449 0.00003
NM_000038.6(APC):c.8383G>A (p.Ala2795Thr) rs369264968 0.00003
NM_001127511.3(APC):c.130G>A (p.Ala44Thr) rs367773779 0.00003
NM_000038.6(APC):c.1554G>A (p.Thr518=) rs546568052 0.00002
NM_000038.6(APC):c.4399C>T (p.Pro1467Ser) rs749142480 0.00002
NM_000038.6(APC):c.5060G>A (p.Arg1687Gln) rs779068685 0.00002
NM_000038.6(APC):c.5271T>C (p.Ser1757=) rs752875511 0.00002
NM_000038.6(APC):c.6106G>A (p.Asp2036Asn) rs1312511221 0.00002
NM_000038.6(APC):c.7020C>T (p.Asn2340=) rs773108684 0.00002
NM_000038.6(APC):c.7781C>G (p.Ser2594Cys) rs543396310 0.00002
NM_000038.6(APC):c.7821C>T (p.Ser2607=) rs532235331 0.00002
NM_000038.6(APC):c.8429A>G (p.Asn2810Ser) rs758044862 0.00002
NC_000005.10:g.112707478del rs1203124819 0.00001
NM_000038.6(APC):c.1746A>G (p.Glu582=) rs876658969 0.00001
NM_000038.6(APC):c.221A>C (p.Glu74Ala) rs773347338 0.00001
NM_000038.6(APC):c.2277C>T (p.Ala759=) rs762441650 0.00001
NM_000038.6(APC):c.228C>T (p.Asn76=) rs766325173 0.00001
NM_000038.6(APC):c.2568C>T (p.Arg856=) rs751433216 0.00001
NM_000038.6(APC):c.3555A>G (p.Thr1185=) rs786201125 0.00001
NM_000038.6(APC):c.3909A>G (p.Gln1303=) rs746289994 0.00001
NM_000038.6(APC):c.3910A>G (p.Ile1304Val) rs770157475 0.00001
NM_000038.6(APC):c.4005C>T (p.Ser1335=) rs751729992 0.00001
NM_000038.6(APC):c.4134G>A (p.Gln1378=) rs780368623 0.00001
NM_000038.6(APC):c.4311A>G (p.Lys1437=) rs371784771 0.00001
NM_000038.6(APC):c.4376C>G (p.Thr1459Ser) rs756048549 0.00001
NM_000038.6(APC):c.4534G>A (p.Asp1512Asn) rs778699501 0.00001
NM_000038.6(APC):c.4919G>A (p.Arg1640Gln) rs529480958 0.00001
NM_000038.6(APC):c.5017G>A (p.Glu1673Lys) rs587779796 0.00001
NM_000038.6(APC):c.5298T>C (p.Asp1766=) rs781533317 0.00001
NM_000038.6(APC):c.5805G>A (p.Gln1935=) rs377040690 0.00001
NM_000038.6(APC):c.5854C>G (p.Gln1952Glu) rs1166934042 0.00001
NM_000038.6(APC):c.597G>A (p.Ala199=) rs587780601 0.00001
NM_000038.6(APC):c.5981A>T (p.Asp1994Val) rs774815653 0.00001
NM_000038.6(APC):c.6383C>T (p.Ala2128Val) rs753228011 0.00001
NM_000038.6(APC):c.6948A>G (p.Pro2316=) rs202144406 0.00001
NM_000038.6(APC):c.7262C>T (p.Ser2421Leu) rs536557651 0.00001
NM_000038.6(APC):c.7533C>T (p.Leu2511=) rs1057522957 0.00001
NM_000038.6(APC):c.8100T>C (p.Asn2700=) rs761326128 0.00001
NM_000038.6(APC):c.993G>A (p.Ser331=) rs148343173 0.00001
NM_001127511.3(APC):c.-94C>T rs1219858068 0.00001
NM_000038.5(APC):c.-30467A>C rs190326008
NM_000038.5(APC):c.-30555A>C rs1257642100
NM_000038.6(APC):c.1313-10del
NM_000038.6(APC):c.1408+12dup
NM_000038.6(APC):c.1408+20del rs772486710
NM_000038.6(APC):c.1548+10del
NM_000038.6(APC):c.1549-14T>C rs761211430
NM_000038.6(APC):c.1549-16T>C rs773455401
NM_000038.6(APC):c.1743+13del
NM_000038.6(APC):c.1958+27del rs1402242990
NM_000038.6(APC):c.2031C>T (p.Val677=) rs769363082
NM_000038.6(APC):c.2196T>C (p.Asn732=) rs781693283
NM_000038.6(APC):c.2385C>T (p.Leu795=) rs80188155
NM_000038.6(APC):c.259C>T (p.Leu87=) rs569640184
NM_000038.6(APC):c.3047A>T (p.Asp1016Val) rs1554084658
NM_000038.6(APC):c.3462AGA[2] (p.Glu1157del) rs386833391
NM_000038.6(APC):c.3612A>G (p.Gln1204=) rs864622196
NM_000038.6(APC):c.423-4del rs730881230
NM_000038.6(APC):c.423-4dup rs730881230
NM_000038.6(APC):c.5078A>G (p.Glu1693Gly) rs533667536
NM_000038.6(APC):c.5093A>T (p.Asp1698Val)
NM_000038.6(APC):c.5125A>T (p.Thr1709Ser) rs1554086463
NM_000038.6(APC):c.5162G>A (p.Gly1721Asp) rs876660114
NM_000038.6(APC):c.5250C>T (p.Val1750=) rs2229997
NM_000038.6(APC):c.5265_5268delinsATCG (p.Ala1755_Ser1756=) rs1554086584
NM_000038.6(APC):c.6354TGC[5] (p.Ala2122dup) rs587780602
NM_000038.6(APC):c.646-8del
NM_000038.6(APC):c.6474C>A (p.Pro2158=) rs772027192
NM_000038.6(APC):c.6907G>A (p.Gly2303Arg) rs544549596
NM_000038.6(APC):c.715G>C (p.Ala239Pro) rs777760565
NM_000038.6(APC):c.7543A>G (p.Ile2515Val) rs554356011
NM_000038.6(APC):c.777G>T (p.Arg259=) rs147704593
NM_000038.6(APC):c.8255A>C (p.Asn2752Thr) rs878853474
NM_000038.6(APC):c.8354A>T (p.Asn2785Ile) rs1408383396
NM_000038.6(APC):c.934-17del rs762333924
NM_001127511.3(APC):c.-124C>G rs964366695
NM_001127511.3(APC):c.-126dup rs565045828
NM_001127511.3(APC):c.-131G>A rs572582235
NM_001127511.3(APC):c.-131G>T rs572582235
NM_001127511.3(APC):c.-132G>T rs182500056
NM_001127511.3(APC):c.-133C>G rs79896135
NM_001127511.3(APC):c.-133_-132delinsGT rs1580996199
NM_001127511.3(APC):c.-134_-133insG rs1561393341
NM_001127511.3(APC):c.-134_-133insGG rs1561393341
NM_001127511.3(APC):c.-167dup rs1750574582
NM_001127511.3(APC):c.165+16G>C rs1223298182

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