ClinVar Miner

List of variants in gene CPA1 reported as likely benign for Hereditary pancreatitis

Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 306
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HGVS dbSNP gnomAD frequency
NM_001868.4(CPA1):c.604C>A (p.Gln202Lys) rs61735962 0.00405
NM_001868.4(CPA1):c.816G>A (p.Ser272=) rs34843162 0.00217
NM_001868.4(CPA1):c.497G>A (p.Gly166Asp) rs144546424 0.00209
NM_001868.4(CPA1):c.621C>T (p.Thr207=) rs61735158 0.00205
NM_001868.4(CPA1):c.371C>T (p.Thr124Ile) rs150653308 0.00165
NM_001868.4(CPA1):c.1209G>A (p.Thr403=) rs113061008 0.00138
NM_001868.4(CPA1):c.867T>C (p.Ile289=) rs115663631 0.00108
NM_001868.4(CPA1):c.695C>T (p.Thr232Met) rs114488732 0.00104
NM_001868.4(CPA1):c.1029C>T (p.Leu343=) rs61735156 0.00071
NM_001868.4(CPA1):c.281A>G (p.Gln94Arg) rs41274176 0.00068
NM_001868.4(CPA1):c.79C>T (p.Arg27Ter) rs141209213 0.00038
NM_001868.4(CPA1):c.486C>T (p.Phe162=) rs140633988 0.00035
NM_001868.4(CPA1):c.1021G>A (p.Ala341Thr) rs77792157 0.00016
NM_001868.4(CPA1):c.492G>A (p.Thr164=) rs369058363 0.00016
NM_001868.4(CPA1):c.861G>A (p.Lys287=) rs370049711 0.00011
NM_001868.4(CPA1):c.630C>T (p.Leu210=) rs377138792 0.00010
NM_001868.4(CPA1):c.774C>T (p.Asp258=) rs368689434 0.00008
NM_001868.4(CPA1):c.141C>T (p.His47=) rs535901465 0.00007
NM_001868.4(CPA1):c.41T>C (p.Val14Ala) rs782301578 0.00006
NM_001868.4(CPA1):c.586-3C>A rs557631781 0.00006
NM_001868.4(CPA1):c.1218G>A (p.Ala406=) rs569595458 0.00005
NM_001868.4(CPA1):c.1017C>T (p.Ala339=) rs782263314 0.00004
NM_001868.4(CPA1):c.1032C>T (p.Tyr344=) rs202029176 0.00004
NM_001868.4(CPA1):c.1071T>A (p.Ile357=) rs533389472 0.00004
NM_001868.4(CPA1):c.1137C>T (p.Phe379=) rs570466241 0.00004
NM_001868.4(CPA1):c.726C>T (p.His242=) rs782178812 0.00004
NM_001868.4(CPA1):c.93C>T (p.Ala31=) rs565451182 0.00004
NM_001868.4(CPA1):c.1002G>A (p.Lys334=) rs940900312 0.00003
NM_001868.4(CPA1):c.204C>T (p.Pro68=) rs781840776 0.00002
NM_001868.4(CPA1):c.787+1G>A rs782790782 0.00002
NM_001868.4(CPA1):c.792C>T (p.Ser264=) rs782313134 0.00002
NM_001868.4(CPA1):c.825C>T (p.Tyr275=) rs782346209 0.00002
NM_001868.4(CPA1):c.1157G>A (p.Arg386His) rs782338563 0.00001
NM_001868.4(CPA1):c.1203G>A (p.Lys401=) rs781965999 0.00001
NM_001868.4(CPA1):c.1230C>T (p.Ile410=) rs1584854380 0.00001
NM_001868.4(CPA1):c.222G>T (p.Ala74=) rs781880789 0.00001
NM_001868.4(CPA1):c.273G>A (p.Glu91=) rs371709718 0.00001
NM_001868.4(CPA1):c.2T>C (p.Met1Thr) rs142127319 0.00001
NM_001868.4(CPA1):c.330G>T (p.Arg110=) rs1260418233 0.00001
NM_001868.4(CPA1):c.36G>A (p.Gly12=) rs782329501 0.00001
NM_001868.4(CPA1):c.405G>C (p.Leu135=) rs1554411309 0.00001
NM_001868.4(CPA1):c.40G>C (p.Val14Leu) rs1378007993 0.00001
NM_001868.4(CPA1):c.522C>T (p.Ile174=) rs1554411490 0.00001
NM_001868.4(CPA1):c.582G>A (p.Lys194=) rs782749933 0.00001
NM_001868.4(CPA1):c.759C>G (p.Pro253=) rs201117743 0.00001
NM_001868.4(CPA1):c.787T>C (p.Leu263=) rs782458397 0.00001
NM_001868.4(CPA1):c.894C>T (p.Asn298=) rs1437424820 0.00001
NM_001868.4(CPA1):c.1008T>A (p.Ala336=)
NM_001868.4(CPA1):c.1008T>G (p.Ala336=)
NM_001868.4(CPA1):c.1011G>A (p.Val337=)
NM_001868.4(CPA1):c.1017C>G (p.Ala339=)
NM_001868.4(CPA1):c.102C>T (p.Ala34=)
NM_001868.4(CPA1):c.1035G>A (p.Gly345=)
NM_001868.4(CPA1):c.1035G>C (p.Gly345=)
NM_001868.4(CPA1):c.1041G>A (p.Lys347=)
NM_001868.4(CPA1):c.1047C>T (p.Asn349=)
NM_001868.4(CPA1):c.1050T>C (p.Tyr350=)
NM_001868.4(CPA1):c.1074T>C (p.Tyr358=)
NM_001868.4(CPA1):c.1089C>T (p.Ser363=) rs1554412216
NM_001868.4(CPA1):c.1100G>A (p.Trp367Ter)
NM_001868.4(CPA1):c.1109G>A (p.Ser370Asn)
NM_001868.4(CPA1):c.1122G>A (p.Lys374=) rs1584854234
NM_001868.4(CPA1):c.1125C>T (p.Tyr375=)
NM_001868.4(CPA1):c.1131C>T (p.Phe377=)
NM_001868.4(CPA1):c.1134C>A (p.Thr378=)
NM_001868.4(CPA1):c.1134C>G (p.Thr378=)
NM_001868.4(CPA1):c.1134C>T (p.Thr378=)
NM_001868.4(CPA1):c.1143C>G (p.Leu381=)
NM_001868.4(CPA1):c.1149C>T (p.Asp383=)
NM_001868.4(CPA1):c.1152T>A (p.Thr384=)
NM_001868.4(CPA1):c.1152T>C (p.Thr384=)
NM_001868.4(CPA1):c.1152T>G (p.Thr384=)
NM_001868.4(CPA1):c.1158C>A (p.Arg386=)
NM_001868.4(CPA1):c.1158C>T (p.Arg386=)
NM_001868.4(CPA1):c.1161T>C (p.Tyr387=)
NM_001868.4(CPA1):c.1164C>A (p.Gly388=)
NM_001868.4(CPA1):c.1164C>T (p.Gly388=)
NM_001868.4(CPA1):c.1170G>A (p.Leu390=)
NM_001868.4(CPA1):c.1170G>C (p.Leu390=)
NM_001868.4(CPA1):c.1179C>A (p.Ala393=)
NM_001868.4(CPA1):c.1182C>T (p.Ser394=)
NM_001868.4(CPA1):c.1191C>T (p.Ile397=)
NM_001868.4(CPA1):c.1197A>G (p.Thr399=)
NM_001868.4(CPA1):c.1201A>C (p.Lys401Gln)
NM_001868.4(CPA1):c.1202A>G (p.Lys401Arg)
NM_001868.4(CPA1):c.1209G>T (p.Thr403=)
NM_001868.4(CPA1):c.120G>A (p.Lys40=)
NM_001868.4(CPA1):c.1213C>T (p.Leu405=) rs1584854358
NM_001868.4(CPA1):c.1215G>A (p.Leu405=)
NM_001868.4(CPA1):c.1224G>A (p.Leu408=)
NM_001868.4(CPA1):c.1234G>C (p.Glu412Gln)
NM_001868.4(CPA1):c.1236G>A (p.Glu412=)
NM_001868.4(CPA1):c.123G>A (p.Glu41=)
NM_001868.4(CPA1):c.1242C>T (p.Thr414=)
NM_001868.4(CPA1):c.1245G>C (p.Leu415=)
NM_001868.4(CPA1):c.1251C>T (p.His417=)
NM_001868.4(CPA1):c.1254C>A (p.Pro418=)
NM_001868.4(CPA1):c.1254C>T (p.Pro418=)
NM_001868.4(CPA1):c.126G>A (p.Leu42=)
NM_001868.4(CPA1):c.130G>A (p.Asp44Asn)
NM_001868.4(CPA1):c.142del (p.Leu48fs)
NM_001868.4(CPA1):c.144G>A (p.Leu48=)
NM_001868.4(CPA1):c.144G>C (p.Leu48=)
NM_001868.4(CPA1):c.148C>T (p.Leu50=)
NM_001868.4(CPA1):c.156C>T (p.Phe52=)
NM_001868.4(CPA1):c.160C>A (p.Arg54=) rs782645631
NM_001868.4(CPA1):c.160C>T (p.Arg54Trp)
NM_001868.4(CPA1):c.161G>A (p.Arg54Gln)
NM_001868.4(CPA1):c.165G>A (p.Gly55=) rs1126899
NM_001868.4(CPA1):c.165G>T (p.Gly55=)
NM_001868.4(CPA1):c.171C>T (p.Ala57=)
NM_001868.4(CPA1):c.183C>G (p.Ser61=)
NM_001868.4(CPA1):c.186C>T (p.Pro62=)
NM_001868.4(CPA1):c.196C>A (p.Arg66=)
NM_001868.4(CPA1):c.196C>T (p.Arg66Ter)
NM_001868.4(CPA1):c.19T>C (p.Leu7=)
NM_001868.4(CPA1):c.213C>T (p.Ser71=)
NM_001868.4(CPA1):c.216C>A (p.Ile72=)
NM_001868.4(CPA1):c.222G>A (p.Ala74=)
NM_001868.4(CPA1):c.235C>T (p.Leu79=)
NM_001868.4(CPA1):c.243C>G (p.Ser81=)
NM_001868.4(CPA1):c.243C>T (p.Ser81=)
NM_001868.4(CPA1):c.246C>T (p.His82=)
NM_001868.4(CPA1):c.249C>T (p.Gly83=)
NM_001868.4(CPA1):c.261G>A (p.Glu87=)
NM_001868.4(CPA1):c.263C>T (p.Thr88Ile)
NM_001868.4(CPA1):c.270C>T (p.Ile90=)
NM_001868.4(CPA1):c.276C>T (p.Asp92=) rs782248092
NM_001868.4(CPA1):c.279G>A (p.Val93=)
NM_001868.4(CPA1):c.27C>G (p.Val9=)
NM_001868.4(CPA1):c.282G>A (p.Gln94=)
NM_001868.4(CPA1):c.285G>A (p.Ser95=)
NM_001868.4(CPA1):c.288G>C (p.Leu96=)
NM_001868.4(CPA1):c.291G>A (p.Leu97=) rs2117500459
NM_001868.4(CPA1):c.294C>T (p.Asp98=)
NM_001868.4(CPA1):c.297G>A (p.Glu99=)
NM_001868.4(CPA1):c.2_8delinsGCA (p.Met1fs)
NM_001868.4(CPA1):c.300G>A (p.Glu100=)
NM_001868.4(CPA1):c.306del (p.Glu102fs)
NM_001868.4(CPA1):c.307C>G (p.Gln103Glu)
NM_001868.4(CPA1):c.307C>T (p.Gln103Ter) rs997840503
NM_001868.4(CPA1):c.308A>G (p.Gln103Arg)
NM_001868.4(CPA1):c.309G>A (p.Gln103=)
NM_001868.4(CPA1):c.30G>A (p.Leu10=)
NM_001868.4(CPA1):c.30G>C (p.Leu10=)
NM_001868.4(CPA1):c.318C>G (p.Ala106=)
NM_001868.4(CPA1):c.318C>T (p.Ala106=)
NM_001868.4(CPA1):c.31T>C (p.Leu11=)
NM_001868.4(CPA1):c.324G>C (p.Arg108=)
NM_001868.4(CPA1):c.327C>T (p.Ser109=)
NM_001868.4(CPA1):c.328C>G (p.Arg110Gly)
NM_001868.4(CPA1):c.334C>T (p.Arg112Cys)
NM_001868.4(CPA1):c.336C>T (p.Arg112=)
NM_001868.4(CPA1):c.342C>A (p.Thr114=)
NM_001868.4(CPA1):c.342C>G (p.Thr114=)
NM_001868.4(CPA1):c.342C>T (p.Thr114=)
NM_001868.4(CPA1):c.343G>A (p.Asp115Asn)
NM_001868.4(CPA1):c.345C>T (p.Asp115=) rs2117500618
NM_001868.4(CPA1):c.348T>A (p.Thr116=)
NM_001868.4(CPA1):c.348T>C (p.Thr116=)
NM_001868.4(CPA1):c.357C>T (p.Tyr119=)
NM_001868.4(CPA1):c.369C>T (p.His123=)
NM_001868.4(CPA1):c.373C>T (p.Leu125=)
NM_001868.4(CPA1):c.382-4T>A
NM_001868.4(CPA1):c.387T>C (p.Tyr129=)
NM_001868.4(CPA1):c.389A>C (p.Asp130Ala) rs782428216
NM_001868.4(CPA1):c.405G>A (p.Leu135=)
NM_001868.4(CPA1):c.408G>A (p.Val136=)
NM_001868.4(CPA1):c.409G>A (p.Ala137Thr) rs1418197645
NM_001868.4(CPA1):c.410C>G (p.Ala137Gly) rs183429188
NM_001868.4(CPA1):c.411G>A (p.Ala137=)
NM_001868.4(CPA1):c.411G>C (p.Ala137=)
NM_001868.4(CPA1):c.414G>A (p.Glu138=)
NM_001868.4(CPA1):c.420G>A (p.Pro140=)
NM_001868.4(CPA1):c.420G>C (p.Pro140=)
NM_001868.4(CPA1):c.420G>T (p.Pro140=)
NM_001868.4(CPA1):c.423C>G (p.His141Gln)
NM_001868.4(CPA1):c.423C>T (p.His141=)
NM_001868.4(CPA1):c.429C>T (p.Val143=)
NM_001868.4(CPA1):c.42C>A (p.Val14=)
NM_001868.4(CPA1):c.42C>T (p.Val14=)
NM_001868.4(CPA1):c.435G>A (p.Lys145=)
NM_001868.4(CPA1):c.447C>T (p.Gly149=)
NM_001868.4(CPA1):c.453C>T (p.Thr151=)
NM_001868.4(CPA1):c.456T>C (p.Tyr152=)
NM_001868.4(CPA1):c.459A>G (p.Glu153=)
NM_001868.4(CPA1):c.45T>C (p.Phe15=)
NM_001868.4(CPA1):c.462G>T (p.Gly154=)
NM_001868.4(CPA1):c.465T>C (p.Arg155=)
NM_001868.4(CPA1):c.468C>T (p.Pro156=)
NM_001868.4(CPA1):c.471T>C (p.Ile157=)
NM_001868.4(CPA1):c.480G>A (p.Leu160=)
NM_001868.4(CPA1):c.480G>T (p.Leu160=)
NM_001868.4(CPA1):c.489C>T (p.Ser163=)
NM_001868.4(CPA1):c.492G>C (p.Thr164=)
NM_001868.4(CPA1):c.492G>T (p.Thr164=)
NM_001868.4(CPA1):c.495G>A (p.Gly165=)
NM_001868.4(CPA1):c.500G>A (p.Ser167Asn)
NM_001868.4(CPA1):c.504G>T (p.Lys168Asn)
NM_001868.4(CPA1):c.513C>T (p.Ala171=)
NM_001868.4(CPA1):c.51G>A (p.Lys17=)
NM_001868.4(CPA1):c.528G>A (p.Thr176=)
NM_001868.4(CPA1):c.528G>T (p.Thr176=)
NM_001868.4(CPA1):c.530del (p.Gly177fs)
NM_001868.4(CPA1):c.531C>A (p.Gly177=)
NM_001868.4(CPA1):c.537T>C (p.His179=)
NM_001868.4(CPA1):c.540C>T (p.Ser180=)
NM_001868.4(CPA1):c.543G>A (p.Arg181=)
NM_001868.4(CPA1):c.546G>A (p.Glu182=) rs2117503222
NM_001868.4(CPA1):c.552C>T (p.Val184=)
NM_001868.4(CPA1):c.555C>G (p.Thr185=)
NM_001868.4(CPA1):c.555C>T (p.Thr185=)
NM_001868.4(CPA1):c.564T>C (p.Ser188=)
NM_001868.4(CPA1):c.567G>A (p.Gly189=)
NM_001868.4(CPA1):c.570C>G (p.Val190=)
NM_001868.4(CPA1):c.57C>T (p.Asp19=)
NM_001868.4(CPA1):c.591T>C (p.Thr197=)
NM_001868.4(CPA1):c.597C>T (p.Asp199=)
NM_001868.4(CPA1):c.599_600delinsG (p.Tyr200fs) rs1584851947
NM_001868.4(CPA1):c.60T>C (p.Phe20=)
NM_001868.4(CPA1):c.612A>C (p.Ala204=)
NM_001868.4(CPA1):c.615T>G (p.Ala205=)
NM_001868.4(CPA1):c.618C>A (p.Phe206Leu)
NM_001868.4(CPA1):c.625A>G (p.Ile209Val)
NM_001868.4(CPA1):c.627T>C (p.Ile209=)
NM_001868.4(CPA1):c.630C>G (p.Leu210=)
NM_001868.4(CPA1):c.633C>T (p.Asp211=) rs1554411582
NM_001868.4(CPA1):c.635C>A (p.Thr212Asn) rs540251433
NM_001868.4(CPA1):c.635C>G (p.Thr212Ser) rs540251433
NM_001868.4(CPA1):c.637T>C (p.Leu213=)
NM_001868.4(CPA1):c.63G>A (p.Val21=)
NM_001868.4(CPA1):c.63G>C (p.Val21=)
NM_001868.4(CPA1):c.648C>T (p.Phe216=)
NM_001868.4(CPA1):c.649C>T (p.Leu217=)
NM_001868.4(CPA1):c.654G>A (p.Glu218=)
NM_001868.4(CPA1):c.657C>A (p.Ile219=)
NM_001868.4(CPA1):c.657C>T (p.Ile219=) rs1057524778
NM_001868.4(CPA1):c.660C>T (p.Val220=)
NM_001868.4(CPA1):c.681C>T (p.Ala227=)
NM_001868.4(CPA1):c.687G>A (p.Thr229=)
NM_001868.4(CPA1):c.687G>T (p.Thr229=)
NM_001868.4(CPA1):c.690C>T (p.His230=)
NM_001868.4(CPA1):c.696+6G>A rs1046847986
NM_001868.4(CPA1):c.697A>G (p.Asn233Asp)
NM_001868.4(CPA1):c.69T>C (p.His23=)
NM_001868.4(CPA1):c.717T>A (p.Thr239=)
NM_001868.4(CPA1):c.738C>T (p.Ser246=)
NM_001868.4(CPA1):c.741C>A (p.Leu247=)
NM_001868.4(CPA1):c.745A>G (p.Ile249Val)
NM_001868.4(CPA1):c.750C>T (p.Gly250=)
NM_001868.4(CPA1):c.756C>T (p.Asp252=)
NM_001868.4(CPA1):c.759C>A (p.Pro253=)
NM_001868.4(CPA1):c.75G>A (p.Val25=)
NM_001868.4(CPA1):c.75G>C (p.Val25=) rs1277023753
NM_001868.4(CPA1):c.762C>T (p.Asn254=) rs1554411739
NM_001868.4(CPA1):c.786G>A (p.Gly262=)
NM_001868.4(CPA1):c.788-4A>C
NM_001868.4(CPA1):c.788-5C>G rs201705049
NM_001868.4(CPA1):c.789G>A (p.Leu263=)
NM_001868.4(CPA1):c.792C>G (p.Ser264=) rs782313134
NM_001868.4(CPA1):c.795A>G (p.Gly265=)
NM_001868.4(CPA1):c.798C>T (p.Ala266=)
NM_001868.4(CPA1):c.79C>A (p.Arg27=)
NM_001868.4(CPA1):c.807C>T (p.Asn269=)
NM_001868.4(CPA1):c.816G>C (p.Ser272=)
NM_001868.4(CPA1):c.828C>T (p.His276=) rs781912694
NM_001868.4(CPA1):c.834G>A (p.Lys278=) rs201936657
NM_001868.4(CPA1):c.837T>C (p.Phe279=)
NM_001868.4(CPA1):c.840C>G (p.Ala280=)
NM_001868.4(CPA1):c.846C>A (p.Ser282=) rs782496881
NM_001868.4(CPA1):c.846C>T (p.Ser282=)
NM_001868.4(CPA1):c.84C>A (p.Ile28=)
NM_001868.4(CPA1):c.84C>T (p.Ile28=)
NM_001868.4(CPA1):c.852G>A (p.Val284=)
NM_001868.4(CPA1):c.852G>T (p.Val284=)
NM_001868.4(CPA1):c.864C>T (p.Ser288=)
NM_001868.4(CPA1):c.870A>G (p.Val290=)
NM_001868.4(CPA1):c.882G>A (p.Lys294=)
NM_001868.4(CPA1):c.885C>T (p.Asp295=)
NM_001868.4(CPA1):c.891G>A (p.Gly297=)
NM_001868.4(CPA1):c.8_9dup (p.Leu4fs)
NM_001868.4(CPA1):c.900G>A (p.Lys300=)
NM_001868.4(CPA1):c.903C>G (p.Ala301=)
NM_001868.4(CPA1):c.906C>T (p.Phe302=)
NM_001868.4(CPA1):c.915C>T (p.Ile305=)
NM_001868.4(CPA1):c.918C>T (p.His306=)
NM_001868.4(CPA1):c.930G>A (p.Gln310=)
NM_001868.4(CPA1):c.933C>A (p.Leu311=)
NM_001868.4(CPA1):c.933C>T (p.Leu311=)
NM_001868.4(CPA1):c.936C>A (p.Leu312=)
NM_001868.4(CPA1):c.937A>C (p.Met313Leu)
NM_001868.4(CPA1):c.93C>G (p.Ala31=) rs565451182
NM_001868.4(CPA1):c.948T>C (p.Tyr316=)
NM_001868.4(CPA1):c.954_955del (p.Tyr318_Lys319delinsTer)
NM_001868.4(CPA1):c.956A>G (p.Lys319Arg)
NM_001868.4(CPA1):c.95A>G (p.Asp32Gly)
NM_001868.4(CPA1):c.969C>G (p.Val323=)
NM_001868.4(CPA1):c.96T>C (p.Asp32=)
NM_001868.4(CPA1):c.972T>C (p.Pro324=)
NM_001868.4(CPA1):c.985C>T (p.Leu329=)
NM_001868.4(CPA1):c.986del (p.Leu329fs)
NM_001868.4(CPA1):c.988-2A>G
NM_001868.4(CPA1):c.999C>T (p.Ser333=)
NM_001868.4(CPA1):c.99G>A (p.Glu33=)
NM_001868.4(CPA1):c.9G>A (p.Gly3=)
NM_001868.4(CPA1):c.9G>T (p.Gly3=)

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