ClinVar Miner

List of variants reported as benign for Lynch syndrome 1 by KCCC/NGS Laboratory, Kuwait Cancer Control Center

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Total variants: 23
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HGVS dbSNP gnomAD frequency
NM_000251.3(MSH2):c.211+9C>G rs2303426 0.55454
NM_000251.3(MSH2):c.1077-80G>A rs2347794 0.52683
NM_000251.3(MSH2):c.1511-91G>T rs3732182 0.41551
NM_000251.3(MSH2):c.1661+12G>A rs3732183 0.40290
NM_000251.2(MSH2):c.-118T>C rs2303425 0.10316
NM_000251.3(MSH2):c.2006-6T>C rs2303428 0.08921
NM_000251.3(MSH2):c.1511-9A>T rs12998837 0.08749
NM_000251.3(MSH2):c.1760-62G>A rs17218439 0.02701
NM_000251.3(MSH2):c.380A>G (p.Asn127Ser) rs17217772 0.02158
NM_000251.3(MSH2):c.573C>T (p.Leu191=) rs1800151 0.01972
NM_000251.3(MSH2):c.1276+51C>A rs17217961 0.01831
NM_000251.3(MSH2):c.965G>A (p.Gly322Asp) rs4987188 0.01714
NM_000251.3(MSH2):c.1077-10T>C rs17224360 0.01428
NM_000251.3(MSH2):c.2766T>C (p.Phe922=) rs55859129 0.01118
NM_000251.3(MSH2):c.1666T>C (p.Leu556=) rs61756466 0.00449
NM_000251.3(MSH2):c.1662-9G>A rs17218356 0.00398
NM_000251.3(MSH2):c.339G>A (p.Lys113=) rs35898375 0.00313
NM_000251.3(MSH2):c.23C>T (p.Thr8Met) rs17217716 0.00211
NM_000251.3(MSH2):c.819A>G (p.Val273=) rs146577635 0.00094
NM_000251.3(MSH2):c.1387-19C>G rs1553365681
NM_000251.3(MSH2):c.1661+17T>G rs377461923
NM_000251.3(MSH2):c.67T>C (p.Phe23Leu) rs372619120
NM_000251.3(MSH2):c.793-23G>A rs17224255

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