ClinVar Miner

List of variants in gene SCN1A reported as pathogenic for Severe myoclonic epilepsy in infancy

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Total variants: 192
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HGVS dbSNP gnomAD frequency
NC_000002.12:g.166051989del rs1574266816
NM_001165963.1(SCN1A):c.384_964del
NM_001165963.1(SCN1A):c.4285_4476del
NM_001165963.4(SCN1A):c.1005del (p.Cys336fs)
NM_001165963.4(SCN1A):c.1007G>A (p.Cys336Tyr) rs794726798
NM_001165963.4(SCN1A):c.1024G>T (p.Ala342Ser) rs794726843
NM_001165963.4(SCN1A):c.1025C>T (p.Ala342Val) rs794726797
NM_001165963.4(SCN1A):c.1028+1G>A rs863225030
NM_001165963.4(SCN1A):c.1028+1G>T rs863225030
NM_001165963.4(SCN1A):c.1033T>C (p.Cys345Arg) rs794726782
NM_001165963.4(SCN1A):c.1046A>G (p.Tyr349Cys) rs794726844
NM_001165963.4(SCN1A):c.1048A>G (p.Met350Val) rs794726768
NM_001165963.4(SCN1A):c.1055_1056del (p.Val352fs) rs794726767
NM_001165963.4(SCN1A):c.1060G>C (p.Ala354Pro) rs1698022280
NM_001165963.4(SCN1A):c.1072C>T (p.Pro358Ser) rs121917923
NM_001165963.4(SCN1A):c.1076A>G (p.Asn359Ser) rs794726713
NM_001165963.4(SCN1A):c.1096_1115del (p.Asp366fs) rs794726792
NM_001165963.4(SCN1A):c.1118del (p.Leu373fs) rs794726695
NM_001165963.4(SCN1A):c.1129C>T (p.Arg377Ter) rs794726799
NM_001165963.4(SCN1A):c.1130G>A (p.Arg377Gln) rs121917957
NM_001165963.4(SCN1A):c.1134_1136del (p.Met379del) rs2105867004
NM_001165963.4(SCN1A):c.1136T>A (p.Met379Lys) rs794726732
NM_001165963.4(SCN1A):c.1146C>A (p.Asp382Glu) rs794726753
NM_001165963.4(SCN1A):c.1164delinsGG (p.Tyr388Ter) rs1697997770
NM_001165963.4(SCN1A):c.1170+1G>T rs794726765
NM_001165963.4(SCN1A):c.1177C>T (p.Arg393Cys) rs121917929
NM_001165963.4(SCN1A):c.1178G>A (p.Arg393His) rs121917927
NM_001165963.4(SCN1A):c.1178delinsTTAC (p.Arg393delinsLeuThr)
NM_001165963.4(SCN1A):c.1182_1183insA (p.Ala395fs) rs794726777
NM_001165963.4(SCN1A):c.1183_1184del (p.Ala395fs) rs794726776
NM_001165963.4(SCN1A):c.1186G>A (p.Gly396Arg)
NM_001165963.4(SCN1A):c.1197_1198del (p.Met400fs) rs794726818
NM_001165963.4(SCN1A):c.1199T>A (p.Met400Lys) rs794726725
NM_001165963.4(SCN1A):c.1216G>T (p.Val406Phe) rs121918768
NM_001165963.4(SCN1A):c.121A>T (p.Lys41Ter) rs764444350
NM_001165963.4(SCN1A):c.1237T>A (p.Tyr413Asn) rs121917967
NM_001165963.4(SCN1A):c.1259C>T (p.Ala420Val) rs794726826
NM_001165963.4(SCN1A):c.1265T>C (p.Val422Ala) rs121917989
NM_001165963.4(SCN1A):c.126del (p.Asp43fs) rs1553560831
NM_001165963.4(SCN1A):c.126dup (p.Asp43fs) rs1553560831
NM_001165963.4(SCN1A):c.1301del (p.Leu434fs) rs794726810
NM_001165963.4(SCN1A):c.1345G>T (p.Glu449Ter) rs794726807
NM_001165963.4(SCN1A):c.1377+1G>A
NM_001165963.4(SCN1A):c.1442_1445del (p.Asp481fs) rs794726829
NM_001165963.4(SCN1A):c.1489del (p.Arg497fs) rs1697667767
NM_001165963.4(SCN1A):c.1516C>T (p.Gln506Ter) rs794726790
NM_001165963.4(SCN1A):c.1543A>T (p.Lys515Ter) rs1553545567
NM_001165963.4(SCN1A):c.1624C>T (p.Arg542Ter)
NM_001165963.4(SCN1A):c.1639_1640del (p.Lys547fs) rs2105850165
NM_001165963.4(SCN1A):c.1660dup (p.Gln554fs) rs794726717
NM_001165963.4(SCN1A):c.1662+1G>C rs794726749
NM_001165963.4(SCN1A):c.1662+1G>T rs794726749
NM_001165963.4(SCN1A):c.1662+3A>G rs794726773
NM_001165963.4(SCN1A):c.1663_2176del (p.Ser555Asnfs*21)
NM_001165963.4(SCN1A):c.1667del (p.Leu556fs) rs794726704
NM_001165963.4(SCN1A):c.1702C>T (p.Arg568Ter) rs886039430
NM_001165963.4(SCN1A):c.1738C>T (p.Arg580Ter) rs794726736
NM_001165963.4(SCN1A):c.1804G>T (p.Glu602Ter) rs794726834
NM_001165963.4(SCN1A):c.181del (p.Leu61fs) rs2105982815
NM_001165963.4(SCN1A):c.1834C>T (p.Arg612Ter) rs794726778
NM_001165963.4(SCN1A):c.1837C>T (p.Arg613Ter) rs398123585
NM_001165963.4(SCN1A):c.185del (p.Pro62fs) rs35595680
NM_001165963.4(SCN1A):c.1876A>G (p.Ser626Gly) rs121917990
NM_001165963.4(SCN1A):c.1970C>T (p.Pro657Leu) rs794726838
NM_001165963.4(SCN1A):c.2044_6030del
NM_001165963.4(SCN1A):c.2071A>T (p.Lys691Ter) rs794726747
NM_001165963.4(SCN1A):c.207del (p.Pro70fs) rs1574371902
NM_001165963.4(SCN1A):c.2100del (p.Met701fs) rs794726806
NM_001165963.4(SCN1A):c.2131C>T (p.Gln711Ter) rs1574209023
NM_001165963.4(SCN1A):c.2134C>T (p.Arg712Ter) rs794726730
NM_001165963.4(SCN1A):c.2147_2150del (p.Ile716fs) rs1574208760
NM_001165963.4(SCN1A):c.2176+3T>A rs794726795
NM_001165963.4(SCN1A):c.2213G>A (p.Trp738Ter) rs794726742
NM_001165963.4(SCN1A):c.2213G>T (p.Trp738Leu) rs794726742
NM_001165963.4(SCN1A):c.2214G>A (p.Trp738Ter) rs786205214
NM_001165963.4(SCN1A):c.2261G>T (p.Trp754Leu) rs794726743
NM_001165963.4(SCN1A):c.2299_2302dup (p.Pro768fs) rs794726750
NM_001165963.4(SCN1A):c.2303C>T (p.Pro768Leu) rs794726766
NM_001165963.4(SCN1A):c.2318_2319insT (p.Ile774fs) rs794726820
NM_001165963.4(SCN1A):c.2344A>C (p.Thr782Pro)
NM_001165963.4(SCN1A):c.2353A>G (p.Met785Val) rs767045134
NM_001165963.4(SCN1A):c.2415+1G>A rs886041292
NM_001165963.4(SCN1A):c.2479T>G (p.Tyr827Asp) rs794726805
NM_001165963.4(SCN1A):c.249C>A (p.Tyr83Ter) rs863225031
NM_001165963.4(SCN1A):c.2523_2524del (p.Thr841_Leu842insTer) rs794726738
NM_001165963.4(SCN1A):c.2537A>G (p.Glu846Gly) rs794726794
NM_001165963.4(SCN1A):c.2584C>G (p.Arg862Gly) rs397514459
NM_001165963.4(SCN1A):c.2584C>T (p.Arg862Ter) rs397514459
NM_001165963.4(SCN1A):c.2585G>A (p.Arg862Gln) rs121918785
NM_001165963.4(SCN1A):c.2588T>G (p.Leu863Trp) rs794726712
NM_001165963.4(SCN1A):c.2589+3A>T rs794726775
NM_001165963.4(SCN1A):c.2593C>T (p.Arg865Ter) rs794726697
NM_001165963.4(SCN1A):c.2603del (p.Lys868fs) rs794726787
NM_001165963.4(SCN1A):c.2615C>A (p.Ser872Tyr) rs794726786
NM_001165963.4(SCN1A):c.2618G>A (p.Trp873Ter) rs2105808640
NM_001165963.4(SCN1A):c.2624C>T (p.Thr875Met) rs121918623
NM_001165963.4(SCN1A):c.262_264+1del rs1574371141
NM_001165963.4(SCN1A):c.264+5G>A rs794726762
NM_001165963.4(SCN1A):c.264+5G>C rs794726762
NM_001165963.4(SCN1A):c.2678T>A (p.Leu893Ter) rs794726815
NM_001165963.4(SCN1A):c.2680dup (p.Thr894fs) rs1696660743
NM_001165963.4(SCN1A):c.2690T>C (p.Leu897Ser) rs794726761
NM_001165963.4(SCN1A):c.2691G>T (p.Leu897Phe) rs1574183148
NM_001165963.4(SCN1A):c.269T>C (p.Phe90Ser) rs121918733
NM_001165963.4(SCN1A):c.2728C>A (p.Gln910Lys) rs794726721
NM_001165963.4(SCN1A):c.272T>C (p.Ile91Thr) rs121918734
NM_001165963.4(SCN1A):c.2758_2759del (p.Val920fs) rs1574182550
NM_001165963.4(SCN1A):c.2780G>T (p.Cys927Phe) rs794726811
NM_001165963.4(SCN1A):c.2791C>T (p.Arg931Cys) rs121918788
NM_001165963.4(SCN1A):c.2792G>A (p.Arg931His) rs794726718
NM_001165963.4(SCN1A):c.2792G>C (p.Arg931Pro) rs794726718
NM_001165963.4(SCN1A):c.2815C>T (p.His939Tyr) rs121918736
NM_001165963.4(SCN1A):c.2836C>T (p.Arg946Cys) rs121918775
NM_001165963.4(SCN1A):c.2837G>A (p.Arg946His)
NM_001165963.4(SCN1A):c.2837G>C (p.Arg946Pro) rs121917971
NM_001165963.4(SCN1A):c.2846G>A (p.Cys949Tyr) rs1696624989
NM_001165963.4(SCN1A):c.2846G>T (p.Cys949Phe)
NM_001165963.4(SCN1A):c.2854T>G (p.Trp952Gly) rs121918737
NM_001165963.4(SCN1A):c.2862_2863dup (p.Thr955fs)
NM_001165963.4(SCN1A):c.2872_2881del (p.Asp958fs) rs794726808
NM_001165963.4(SCN1A):c.2876G>A (p.Cys959Tyr) rs794726716
NM_001165963.4(SCN1A):c.2879T>G (p.Met960Arg) rs794726708
NM_001165963.4(SCN1A):c.289_292del (p.Lys97fs) rs794726796
NM_001165963.4(SCN1A):c.2903G>T (p.Cys968Phe) rs794726823
NM_001165963.4(SCN1A):c.2929G>A (p.Val977Met) rs794726828
NM_001165963.4(SCN1A):c.2936G>A (p.Gly979Glu) rs794726842
NM_001165963.4(SCN1A):c.2946+1G>T rs794726772
NM_001165963.4(SCN1A):c.2946+1_2946+2del rs794726714
NM_001165963.4(SCN1A):c.2947del rs1696406839
NM_001165963.4(SCN1A):c.2956C>T (p.Leu986Phe) rs121918625
NM_001165963.4(SCN1A):c.2980_2981del (p.Ser994fs) rs794726830
NM_001165963.4(SCN1A):c.2985T>G (p.Phe995Leu) rs794726746
NM_001165963.4(SCN1A):c.3017del (p.Asp1006fs) rs794726813
NM_001165963.4(SCN1A):c.301C>T (p.Arg101Trp) rs121917965
NM_001165963.4(SCN1A):c.302G>A (p.Arg101Gln) rs121917918
NM_001165963.4(SCN1A):c.3062_3066del (p.Lys1021fs) rs794726756
NM_001165963.4(SCN1A):c.308G>T (p.Ser103Ile) rs760361423
NM_001165963.4(SCN1A):c.311C>A (p.Ala104Asp) rs1553553527
NM_001165963.4(SCN1A):c.323T>C (p.Leu108Pro) rs794726793
NM_001165963.4(SCN1A):c.337C>A (p.Pro113Thr) rs794726711
NM_001165963.4(SCN1A):c.345T>A (p.Asn115Lys) rs61741123
NM_001165963.4(SCN1A):c.380A>T (p.His127Leu) rs794726831
NM_001165963.4(SCN1A):c.383+1A>G rs794726803
NM_001165963.4(SCN1A):c.384-1C>G rs794726764
NM_001165963.4(SCN1A):c.384_1662dup
NM_001165963.4(SCN1A):c.429_430del (p.Phe144fs) rs1699147493
NM_001165963.4(SCN1A):c.4338_6030del (p.Asn1446_Gly2008del)
NM_001165963.4(SCN1A):c.433A>G (p.Met145Val) rs794726849
NM_001165963.4(SCN1A):c.473+1G>C rs794726840
NM_001165963.4(SCN1A):c.474-1G>A rs1698962501
NM_001165963.4(SCN1A):c.474_602del (p.Thr160_Tyr202del) rs1553551314
NM_001165963.4(SCN1A):c.530G>T (p.Gly177Val) rs121918770
NM_001165963.4(SCN1A):c.539T>A (p.Leu180Ter) rs1574281711
NM_001165963.4(SCN1A):c.568T>C (p.Trp190Arg) rs121918773
NM_001165963.4(SCN1A):c.580G>A (p.Asp194Asn) rs121917935
NM_001165963.4(SCN1A):c.591del (p.Ile198fs) rs1698941202
NM_001165963.4(SCN1A):c.602+1G>A
NM_001165963.4(SCN1A):c.602+1G>T rs794726827
NM_001165963.4(SCN1A):c.602+3A>C rs794726833
NM_001165963.4(SCN1A):c.603-2A>G rs1057519531
NM_001165963.4(SCN1A):c.657_658del (p.Arg219fs) rs1574272192
NM_001165963.4(SCN1A):c.659_662del (p.Val220fs) rs794726724
NM_001165963.4(SCN1A):c.664C>T (p.Arg222Ter) rs121918624
NM_001165963.4(SCN1A):c.675G>C (p.Lys225Asn) rs794726719
NM_001165963.4(SCN1A):c.677C>T (p.Thr226Met) rs121917984
NM_001165963.4(SCN1A):c.680T>G (p.Ile227Ser) rs121917937
NM_001165963.4(SCN1A):c.684del (p.Val229fs) rs1574271602
NM_001165963.4(SCN1A):c.689_690insG (p.Ile230fs) rs1698732089
NM_001165963.4(SCN1A):c.694+5G>C rs727504142
NM_001165963.4(SCN1A):c.70G>A (p.Ala24Thr) rs794726848
NM_001165963.4(SCN1A):c.715G>A (p.Ala239Thr) rs121917985
NM_001165963.4(SCN1A):c.716C>T (p.Ala239Val) rs121917909
NM_001165963.4(SCN1A):c.728C>A (p.Ser243Tyr) rs794726755
NM_001165963.4(SCN1A):c.747T>G (p.Asp249Glu) rs773407463
NM_001165963.4(SCN1A):c.751del (p.Val250_Met251insTer) rs794726751
NM_001165963.4(SCN1A):c.769T>C (p.Cys257Arg) rs794726771
NM_001165963.4(SCN1A):c.777C>A (p.Ser259Arg) rs121918735
NM_001165963.4(SCN1A):c.825_826insGTATA (p.Lys276delinsValTer) rs794726812
NM_001165963.4(SCN1A):c.826A>C (p.Lys276Gln) rs794726847
NM_001165963.4(SCN1A):c.835C>T (p.Gln279Ter)
NM_001165963.4(SCN1A):c.838T>C (p.Trp280Arg) rs121917938
NM_001165963.4(SCN1A):c.896_905del (p.Asn299fs) rs794726788
NM_001165963.4(SCN1A):c.930_931dup (p.Glu311fs) rs794726846
NM_001165963.4(SCN1A):c.939del (p.Trp314fs)
NM_001165963.4(SCN1A):c.947C>A (p.Ser316Ter)
NM_001165963.4(SCN1A):c.964+14T>G rs794726837
NM_001165963.4(SCN1A):c.965-1G>A rs794726824
NM_001165963.4(SCN1A):c.965-2A>G
NM_001165963.4(SCN1A):c.985G>T (p.Gly329Cys) rs781746113
NM_001165963.4(SCN1A):c.986G>T (p.Gly329Val) rs779184118
NM_001165963.4(SCN1A):c.992dup (p.Leu331fs) rs863225038
NM_006920.4(SCN1A):c.384_473del (p.Leu129_Glu158del)

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