List of variants in gene combination LOC102724058, SCN1A reported as likely benign for not provided

Minimum submission review status:		Collection method:
Minimum conflict level: Report conflict between different conditions
Gene type: Distinguish antisense genes from sense genes
Show significances as they were submitted (without aggregation into standard terms)
		ClinVar version:

Total variants: 97

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HGVS	dbSNP	gnomAD frequency
NM_001165963.4(SCN1A):c.3723T>C (p.Tyr1241=)	rs36031496	0.03789
NM_001165963.4(SCN1A):c.4582-254G>A	rs919198	0.02168
NM_001165963.4(SCN1A):c.4338+74C>T	rs4305294	0.02157
NM_001165963.4(SCN1A):c.4339-96dup	rs142978131	0.01816
NM_001165963.4(SCN1A):c.3429+109T>A	rs200404199	0.01392
NM_001165963.4(SCN1A):c.4284+271T>A	rs149674261	0.01336
NM_001165963.4(SCN1A):c.*1653C>T	rs79971813	0.01291
NM_001165963.4(SCN1A):c.3706-146C>G	rs115294408	0.01136
NM_001165963.4(SCN1A):c.4853-222A>T	rs56079318	0.01100
NM_001165963.4(SCN1A):c.4476+33G>A	rs73969742	0.01061
NM_001165963.4(SCN1A):c.3705+33T>G	rs76743139	0.00915
NM_001165963.4(SCN1A):c.3551-67G>A	rs114396026	0.00881
NM_001165963.4(SCN1A):c.5864T>C (p.Ile1955Thr)	rs35735053	0.00876
NM_001165963.4(SCN1A):c.5418G>A (p.Glu1806=)	rs140237315	0.00855
NM_001165963.4(SCN1A):c.3705+166del	rs139618094	0.00770
NM_001165963.4(SCN1A):c.4581+124C>G	rs13398882	0.00690
NM_001165963.4(SCN1A):c.*1952T>C	rs184794128	0.00627
NM_001165963.4(SCN1A):c.4476+202T>A	rs149570962	0.00627
NM_001165963.4(SCN1A):c.4476+316C>T	rs184022580	0.00625
NM_001165963.4(SCN1A):c.4477-37A>G	rs182207375	0.00616
NM_001165963.4(SCN1A):c.*1750T>C	rs181548655	0.00414
NM_001165963.4(SCN1A):c.*1864T>A	rs150155252	0.00341
NM_001165963.4(SCN1A):c.4002+2422A>G	rs185755900	0.00310
NM_001165963.4(SCN1A):c.4582-27G>A	rs113927395	0.00160
NM_001165963.4(SCN1A):c.3521C>G (p.Thr1174Ser)	rs121918799	0.00159
NM_001165963.4(SCN1A):c.4731T>C (p.Asn1577=)	rs145296488	0.00114
NM_001165963.4(SCN1A):c.3101T>C (p.Ile1034Thr)	rs121918818	0.00084
NM_001165963.4(SCN1A):c.5951C>A (p.Pro1984His)	rs146733308	0.00074
NM_001165963.4(SCN1A):c.3948G>A (p.Arg1316=)	rs149579028	0.00073
NM_001165963.4(SCN1A):c.5782C>G (p.Arg1928Gly)	rs121917956	0.00073
NM_001165963.4(SCN1A):c.3924A>T (p.Glu1308Asp)	rs121917910	0.00070
NM_001165963.4(SCN1A):c.*774G>A	rs570379164	0.00054
NM_001165963.4(SCN1A):c.4945C>T (p.Leu1649=)	rs148546224	0.00047
NM_001165963.4(SCN1A):c.3749C>T (p.Thr1250Met)	rs140731963	0.00025
NM_001165963.4(SCN1A):c.3899C>T (p.Thr1300Ile)	rs146878122	0.00019
NM_001165963.4(SCN1A):c.4129A>G (p.Ile1377Val)	rs762317674	0.00016
NM_001165963.4(SCN1A):c.5870A>G (p.Glu1957Gly)	rs121918802	0.00016
NM_001165963.4(SCN1A):c.3717T>C (p.Asp1239=)	rs376579606	0.00015
NM_001165963.4(SCN1A):c.3550+34T>G	rs367591519	0.00014
NM_001165963.4(SCN1A):c.5217C>T (p.Pro1739=)	rs149315236	0.00014
NM_001165963.4(SCN1A):c.5639G>A (p.Gly1880Glu)	rs201905405	0.00011
NM_001165963.4(SCN1A):c.4906C>A (p.Arg1636=)	rs199727342	0.00010
NM_001165963.4(SCN1A):c.4557G>A (p.Pro1519=)	rs368785509	0.00008
NM_001165963.4(SCN1A):c.4887C>T (p.Phe1629=)	rs587780445	0.00008
NM_001165963.4(SCN1A):c.3481G>A (p.Ala1161Thr)	rs201079458	0.00006
NM_001165963.4(SCN1A):c.3732G>A (p.Gln1244=)	rs369688121	0.00006
NM_001165963.4(SCN1A):c.4570C>A (p.Pro1524Thr)	rs143088184	0.00006
NM_001165963.4(SCN1A):c.3166A>G (p.Asn1056Asp)	rs746016312	0.00005
NM_001165963.4(SCN1A):c.4905C>T (p.Phe1635=)	rs774858072	0.00005
NM_001165963.4(SCN1A):c.4556C>T (p.Pro1519Leu)	rs372425457	0.00004
NM_001165963.4(SCN1A):c.4791T>C (p.His1597=)	rs141051370	0.00004
NM_001165963.4(SCN1A):c.3387G>A (p.Thr1129=)	rs375953445	0.00003
NM_001165963.4(SCN1A):c.4162G>A (p.Glu1388Lys)	rs775820803	0.00003
NM_001165963.4(SCN1A):c.5763T>C (p.Ile1921=)	rs767698089	0.00003
NM_001165963.4(SCN1A):c.3220G>A (p.Asp1074Asn)	rs751514645	0.00002
NM_001165963.4(SCN1A):c.3276T>G (p.Val1092=)	rs895560193	0.00002
NM_001165963.4(SCN1A):c.3638G>A (p.Arg1213Gln)	rs566081370	0.00002
NM_001165963.4(SCN1A):c.3889G>A (p.Val1297Ile)	rs1260685558	0.00002
NM_001165963.4(SCN1A):c.4095C>T (p.Gly1365=)	rs372749240	0.00002
NM_001165963.4(SCN1A):c.4923T>C (p.Ala1641=)	rs369650500	0.00002
NM_001165963.4(SCN1A):c.3176A>T (p.Asp1059Val)	rs779306054	0.00001
NM_001165963.4(SCN1A):c.3224A>G (p.Tyr1075Cys)	rs1226603266	0.00001
NM_001165963.4(SCN1A):c.3573T>C (p.Cys1191=)	rs750943685	0.00001
NM_001165963.4(SCN1A):c.3576T>C (p.Cys1192=)	rs150638891	0.00001
NM_001165963.4(SCN1A):c.3630G>A (p.Thr1210=)	rs377326177	0.00001
NM_001165963.4(SCN1A):c.4389T>C (p.Phe1463=)	rs794727375	0.00001
NM_001165963.4(SCN1A):c.4524T>C (p.Tyr1508=)	rs778620898	0.00001
NM_001165963.4(SCN1A):c.4581A>G (p.Gly1527=)	rs1470930262	0.00001
NM_001165963.4(SCN1A):c.4941A>G (p.Leu1647=)	rs770111331	0.00001
NM_001165963.4(SCN1A):c.5202C>T (p.Leu1734=)	rs140664455	0.00001
NM_001165963.4(SCN1A):c.5430G>A (p.Glu1810=)	rs765676433	0.00001
NM_001165963.4(SCN1A):c.5502G>A (p.Ala1834=)	rs754566611	0.00001
NM_001165963.4(SCN1A):c.5532A>G (p.Pro1844=)	rs886043063	0.00001
NM_001165963.4(SCN1A):c.5656C>A (p.Arg1886=)	rs779614747	0.00001
NM_001165963.4(SCN1A):c.5963G>A (p.Arg1988Gln)	rs769477807	0.00001
NM_001165963.4(SCN1A):c.3480C>T (p.Gly1160=)	rs369594817
NM_001165963.4(SCN1A):c.3885A>G (p.Ser1295=)	rs2105571546
NM_001165963.4(SCN1A):c.4003-5A>G	rs1574007160
NM_001165963.4(SCN1A):c.4050G>A (p.Val1350=)	rs2105510228
NM_001165963.4(SCN1A):c.4152G>A (p.Arg1384=)	rs1691062261
NM_001165963.4(SCN1A):c.4401C>A (p.Ile1467=)	rs1690335252
NM_001165963.4(SCN1A):c.4431G>T (p.Leu1477=)
NM_001165963.4(SCN1A):c.4497T>C (p.Phe1499=)	rs2105462579
NM_001165963.4(SCN1A):c.4521C>T (p.Tyr1507=)	rs750997506
NM_001165963.4(SCN1A):c.4551A>G (p.Lys1517=)	rs374087499
NM_001165963.4(SCN1A):c.4734G>T (p.Leu1578=)
NM_001165963.4(SCN1A):c.4929T>C (p.Ile1643=)	rs1573952870
NM_001165963.4(SCN1A):c.4953A>G (p.Lys1651=)
NM_001165963.4(SCN1A):c.5008T>C (p.Leu1670=)
NM_001165963.4(SCN1A):c.5022C>T (p.Gly1674=)	rs1689327411
NM_001165963.4(SCN1A):c.5205C>T (p.Asn1735=)	rs2105431102
NM_001165963.4(SCN1A):c.5279C>A (p.Ser1760Tyr)
NM_001165963.4(SCN1A):c.5349G>C (p.Ala1783=)	rs369500022
NM_001165963.4(SCN1A):c.5610T>A (p.Ala1870=)	rs1403005079
NM_001165963.4(SCN1A):c.5632_5634delinsAAT (p.Glu1878Asn)	rs1573944260
NM_001165963.4(SCN1A):c.5681T>C (p.Met1894Thr)	rs562208324
NM_001165963.4(SCN1A):c.5865A>G (p.Ile1955Met)	rs796052952

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