ClinVar Miner

List of variants in gene MLH1 reported as benign for not provided

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Gene type:
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Total variants: 106
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HGVS dbSNP gnomAD frequency
NM_000249.4(MLH1):c.1039-755T>A rs6550446 0.45793
NM_000249.4(MLH1):c.1668-19A>G rs9876116 0.41821
NM_000249.4(MLH1):c.453+79A>G rs4234259 0.41512
NM_000249.4(MLH1):c.1990-121C>T rs2241031 0.41163
NM_000249.4(MLH1):c.1039-759T>C rs6550445 0.40947
NM_000249.4(MLH1):c.207+571C>T rs9852378 0.39684
NM_000249.4(MLH1):c.1039-78A>G rs11129748 0.36570
NM_000249.4(MLH1):c.453+544T>C rs4647250 0.36066
NM_000249.4(MLH1):c.1410-169C>T rs2286940 0.35670
NM_000249.4(MLH1):c.655A>G (p.Ile219Val) rs1799977 0.23048
NM_000249.4(MLH1):c.1039-31A>T rs59684491 0.22372
NM_000249.3(MLH1):c.-93G>A rs1800734 0.22121
NM_000249.4(MLH1):c.307-1403A>T rs1540354 0.14330
NM_000249.4(MLH1):c.1039-33A>T rs1158086051 0.08491
NM_000249.4(MLH1):c.1668-185T>C rs9858264 0.06044
NM_000249.4(MLH1):c.381-209C>T rs4647242 0.05683
NM_000249.4(MLH1):c.1558+14G>A rs41562513 0.05554
NM_000249.4(MLH1):c.546-191T>C rs13320360 0.05440
NM_000249.4(MLH1):c.453+188C>T rs4647247 0.05422
NM_000249.4(MLH1):c.2104-283A>G rs74837207 0.05175
NM_000249.4(MLH1):c.1897-297T>C rs9862359 0.04893
NM_000249.4(MLH1):c.1410-54C>T rs7633154 0.04850
NM_000249.4(MLH1):c.791-222T>G rs4647278 0.03860
NM_000249.4(MLH1):c.1559-1116A>T rs9985414 0.03856
NM_000249.4(MLH1):c.1039-29A>T rs6771325 0.03662
NM_000249.4(MLH1):c.1038+254G>A rs56314768 0.03429
NM_000249.4(MLH1):c.454-51T>C rs4647255 0.03218
NM_000249.4(MLH1):c.1668-254C>T rs41552415 0.03054
NM_000249.4(MLH1):c.546-75A>C rs4647257 0.03034
NM_000249.4(MLH1):c.306+213T>C rs4647221 0.02675
NM_000249.4(MLH1):c.1732-2322T>C rs9311150 0.02351
NM_000249.4(MLH1):c.2152C>T (p.His718Tyr) rs2020873 0.02345
NM_000249.4(MLH1):c.307-1513C>G rs4647230 0.02342
NM_000249.4(MLH1):c.885-81G>C rs104894999 0.02021
NM_000249.4(MLH1):c.380+120G>A rs4647234 0.01994
NM_000249.4(MLH1):c.381-41A>G rs4647245 0.01794
NM_000249.4(MLH1):c.453+655G>A rs114387565 0.01691
NM_000249.4(MLH1):c.474C>T (p.Asn158=) rs4647256 0.01161
NM_000249.4(MLH1):c.588+11G>C rs4647258 0.00993
NM_000249.4(MLH1):c.1732-19T>A rs77120160 0.00923
NM_000249.4(MLH1):c.1959G>T (p.Leu653=) rs1800146 0.00913
NM_000249.4(MLH1):c.637G>A (p.Val213Met) rs2308317 0.00818
NM_000249.4(MLH1):c.1038+51C>T rs55986674 0.00582
NM_000249.4(MLH1):c.589-15C>T rs55658850 0.00582
NM_000249.4(MLH1):c.545+20A>T rs121909453 0.00424
NM_000249.4(MLH1):c.1963A>G (p.Ile655Val) rs55907433 0.00297
NM_000249.4(MLH1):c.790+10A>G rs182733777 0.00188
NM_000249.4(MLH1):c.2146G>A (p.Val716Met) rs35831931 0.00143
NM_000249.4(MLH1):c.-7C>T rs104894994 0.00115
NM_000249.4(MLH1):c.1217G>A (p.Ser406Asn) rs41294980 0.00087
NM_000249.4(MLH1):c.1151T>A (p.Val384Asp) rs63750447 0.00077
NM_000249.4(MLH1):c.375A>G (p.Ala125=) rs1800144 0.00062
NM_000249.4(MLH1):c.1410-10T>G rs372053184 0.00044
NM_000249.4(MLH1):c.198C>T (p.Thr66=) rs61751642 0.00040
NM_000249.4(MLH1):c.1321G>A (p.Ala441Thr) rs63750365 0.00034
NM_000249.4(MLH1):c.487A>C (p.Arg163=) rs748500860 0.00029
NM_000249.4(MLH1):c.2066A>G (p.Gln689Arg) rs63750702 0.00022
NM_000249.4(MLH1):c.394G>C (p.Asp132His) rs28930073 0.00019
NM_000249.4(MLH1):c.2101C>A (p.Gln701Lys) rs63750114 0.00016
NM_000249.4(MLH1):c.2001C>T (p.Asp667=) rs63750014 0.00014
NM_000249.4(MLH1):c.1050A>G (p.Pro350=) rs137937003 0.00012
NM_000249.4(MLH1):c.1808C>G (p.Pro603Arg) rs63750876 0.00009
NM_000249.4(MLH1):c.649C>T (p.Arg217Cys) rs4986984 0.00007
NM_000249.4(MLH1):c.69A>G (p.Glu23=) rs63750555 0.00006
NM_000249.4(MLH1):c.1128T>C (p.Asp376=) rs267607824 0.00005
NM_000249.4(MLH1):c.1392T>C (p.Pro464=) rs63750201 0.00005
NM_000249.4(MLH1):c.1284T>C (p.Asp428=) rs772555970 0.00004
NM_000249.4(MLH1):c.1039-33_1039-29del rs148615368 0.00003
NM_000249.4(MLH1):c.303T>G (p.Gly101=) rs4647220 0.00002
NM_000249.4(MLH1):c.1039-5T>C rs587782626 0.00001
NM_000249.4(MLH1):c.1074G>A (p.Glu358=) rs587780533 0.00001
NM_000249.4(MLH1):c.1191G>A (p.Leu397=) rs35164771 0.00001
NM_000249.4(MLH1):c.1452T>C (p.Asp484=) rs587778916 0.00001
NM_000249.4(MLH1):c.1698T>C (p.Tyr566=) rs876658915 0.00001
NM_000249.4(MLH1):c.2013A>G (p.Glu671=) rs747503723 0.00001
NM_000249.4(MLH1):c.2070C>T (p.Tyr690=) rs550890395 0.00001
NM_000249.4(MLH1):c.2085G>A (p.Ser695=) rs191505871 0.00001
NM_000249.4(MLH1):c.24T>A (p.Ile8=) rs748406142 0.00001
NM_000249.4(MLH1):c.306+17A>G rs1057523893 0.00001
NM_000249.4(MLH1):c.423A>G (p.Pro141=) rs201176051 0.00001
NM_000249.4(MLH1):c.762G>A (p.Lys254=) rs863224341 0.00001
NM_000249.4(MLH1):c.790+20A>G rs774777889 0.00001
NM_000249.4(MLH1):c.884+10C>T rs864622424 0.00001
NM_000249.4(MLH1):c.969G>C (p.Leu323=) rs1553648063 0.00001
NM_000249.4(MLH1):c.*32CTT[1] rs193922366
NM_000249.4(MLH1):c.*7TTAT[1] rs779336928
NM_000249.4(MLH1):c.1029C>T (p.Tyr343=) rs1553648220
NM_000249.4(MLH1):c.1038+86T>C rs2286939
NM_000249.4(MLH1):c.1039-29_1039-23del rs1391289170
NM_000249.4(MLH1):c.1039-33_1039-26del rs766706153
NM_000249.4(MLH1):c.1039-6dup rs1553650466
NM_000249.4(MLH1):c.1039-8_1039-7insTTTTA rs535965616
NM_000249.4(MLH1):c.1359G>A (p.Lys453=) rs756099600
NM_000249.4(MLH1):c.1409+1200AC[12] rs57599682
NM_000249.4(MLH1):c.1409+1200AC[15] rs57599682
NM_000249.4(MLH1):c.1409+1200AC[9] rs57599682
NM_000249.4(MLH1):c.1409+1385_1409+1386del rs377498360
NM_000249.4(MLH1):c.1667+248TTTG[8] rs3067695
NM_000249.4(MLH1):c.1852_1853delinsGC (p.Lys618Ala) rs35502531
NM_000249.4(MLH1):c.1897-162del rs11290150
NM_000249.4(MLH1):c.208-137del rs111908792
NM_000249.4(MLH1):c.2235C>T (p.Asn745=) rs864622677
NM_000249.4(MLH1):c.678-209_678-208insGAGG rs56919120
NM_000249.4(MLH1):c.678-241_678-234dup rs754664808
NM_000249.4(MLH1):c.885-21TC[2] rs267607804
NM_000249.4(MLH1):c.927C>T (p.Pro309=) rs63749896

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