ClinVar Miner

List of variants in gene NEK1 reported as likely benign for not provided

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Gene type:
ClinVar version:
Total variants: 88
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HGVS dbSNP gnomAD frequency
NM_001199397.3(NEK1):c.1388C>T (p.Ala463Val) rs34540355 0.03694
NM_001199397.3(NEK1):c.2974+248C>G rs111471788 0.02402
NM_001199397.3(NEK1):c.1749+197C>T rs114868487 0.02008
NM_001199397.3(NEK1):c.312+195G>A rs76717142 0.01613
NM_001199397.3(NEK1):c.1912-260A>T rs73867833 0.01427
NM_001199397.3(NEK1):c.1665+239G>A rs55741453 0.01424
NM_001199397.3(NEK1):c.396+131A>G rs6553443 0.01419
NM_001199397.3(NEK1):c.1911+86A>G rs145407222 0.01294
NM_001199397.3(NEK1):c.606+159C>T rs115529181 0.01281
NM_001199397.3(NEK1):c.1267-181G>T rs115624903 0.01280
NM_001199397.3(NEK1):c.1833+109G>A rs75602067 0.01221
NM_001199397.3(NEK1):c.3584-280T>A rs113997964 0.01203
NM_001199397.3(NEK1):c.1666-151T>C rs114016854 0.01116
NM_001199397.3(NEK1):c.-488C>T rs62334514 0.01094
NM_001199397.3(NEK1):c.1834-222G>A rs187185418 0.00888
NM_001199397.3(NEK1):c.117+95G>A rs137904860 0.00835
NM_001199397.3(NEK1):c.551+217T>C rs148867988 0.00779
NM_001199397.3(NEK1):c.396+41A>G rs114106978 0.00752
NM_001199397.3(NEK1):c.313-250C>T rs115368339 0.00751
NM_001199397.3(NEK1):c.868+87G>A rs76478554 0.00733
NM_001199397.3(NEK1):c.1665+306A>G rs186884729 0.00673
NM_001199397.3(NEK1):c.2140-158G>T rs149923703 0.00673
NM_001199397.3(NEK1):c.2008-140_2008-139insATA rs144585201 0.00578
NM_001199397.3(NEK1):c.2886-155T>G rs143112624 0.00562
NM_001199397.3(NEK1):c.3624T>C (p.Asp1208=) rs55740606 0.00560
NM_001199397.3(NEK1):c.2731C>G (p.Gln911Glu) rs6828134 0.00535
NM_001199397.3(NEK1):c.869-98T>C rs150058797 0.00531
NM_001199397.3(NEK1):c.3375-174C>T rs139974241 0.00495
NM_001199397.3(NEK1):c.1834-85T>C rs116072569 0.00438
NM_001199397.3(NEK1):c.2885+142T>C rs75739350 0.00435
NM_001199397.3(NEK1):c.2235T>G (p.Asn745Lys) rs34324114 0.00417
NM_001199397.3(NEK1):c.3223-161A>T rs147795888 0.00387
NM_001199397.3(NEK1):c.1563-152_1563-151del rs544535343 0.00379
NM_001199397.3(NEK1):c.-48-181T>A rs115462849 0.00323
NM_001199397.3(NEK1):c.1267-36A>G rs149763070 0.00305
NM_001199397.3(NEK1):c.3222+64T>A rs72691050 0.00296
NM_001199397.3(NEK1):c.1021G>A (p.Ala341Thr) rs189186475 0.00227
NM_001199397.3(NEK1):c.975A>G (p.Gly325=) rs150904906 0.00218
NM_001199397.3(NEK1):c.782G>A (p.Arg261His) rs200161705 0.00216
NM_001199397.3(NEK1):c.1666-17C>T rs183761065 0.00203
NM_001199397.3(NEK1):c.1581T>C (p.Ala527=) rs184804243 0.00188
NM_001199397.3(NEK1):c.3411G>A (p.Leu1137=) rs56077602 0.00169
NM_001199397.3(NEK1):c.924T>G (p.Ile308Met) rs10034957 0.00151
NM_001199397.3(NEK1):c.3213C>T (p.Asn1071=) rs184324310 0.00098
NM_001199397.3(NEK1):c.2940G>A (p.Ser980=) rs56252746 0.00080
NM_001199397.3(NEK1):c.618C>A (p.Gly206=) rs373174833 0.00066
NM_001199397.3(NEK1):c.2137G>A (p.Val713Met) rs199827465 0.00063
NM_001199397.3(NEK1):c.3193A>G (p.Thr1065Ala) rs371084271 0.00044
NM_001199397.3(NEK1):c.3567C>T (p.Asn1189=) rs200710438 0.00038
NM_001199397.3(NEK1):c.1617G>A (p.Gln539=) rs146569517 0.00024
NM_001199397.3(NEK1):c.162A>G (p.Val54=) rs369056831 0.00014
NM_001199397.3(NEK1):c.594A>G (p.Thr198=) rs373252814 0.00014
NM_001199397.3(NEK1):c.114A>T (p.Ser38=) rs778749876 0.00012
NM_001199397.3(NEK1):c.2067A>G (p.Thr689=) rs757747641 0.00011
NM_001199397.3(NEK1):c.3562C>T (p.Leu1188=) rs184270885 0.00011
NM_001199397.3(NEK1):c.912T>C (p.Pro304=) rs139433990 0.00011
NM_001199397.3(NEK1):c.2421C>T (p.Phe807=) rs56346829 0.00009
NM_001199397.3(NEK1):c.1080+20G>A rs192292678 0.00008
NM_001199397.3(NEK1):c.1080+4T>C rs757527637 0.00008
NM_001199397.3(NEK1):c.1750-6T>C rs187716707 0.00008
NM_001199397.3(NEK1):c.2205+7A>G rs760656122 0.00004
NM_001199397.3(NEK1):c.1424C>G (p.Pro475Arg) rs369081861 0.00003
NM_001199397.3(NEK1):c.3159T>C (p.Asn1053=) rs776651638 0.00003
NM_001199397.3(NEK1):c.426A>G (p.Val142=) rs200769726 0.00003
NM_001199397.3(NEK1):c.3420G>A (p.Ser1140=) rs772760832 0.00002
NM_001199397.3(NEK1):c.3612A>G (p.Glu1204=) rs376870683 0.00002
NM_001199397.3(NEK1):c.3678C>G (p.Gly1226=) rs778153481 0.00002
NM_001199397.3(NEK1):c.2190C>G (p.Thr730=) rs200074295 0.00001
NM_001199397.3(NEK1):c.2199T>A (p.Ala733=) rs780309602 0.00001
NM_001199397.3(NEK1):c.264G>A (p.Leu88=) rs780568580 0.00001
NM_001199397.3(NEK1):c.3848-10T>G rs762040322 0.00001
NM_001199397.3(NEK1):c.777C>T (p.Ala259=) rs1325143287 0.00001
NM_001199397.3(NEK1):c.-48-245A>T rs187397276
NM_001199397.3(NEK1):c.1021-81_1021-77del rs201948240
NM_001199397.3(NEK1):c.1081-122dup rs141863651
NM_001199397.3(NEK1):c.1081-8dup rs398124255
NM_001199397.3(NEK1):c.1122A>G (p.Glu374=)
NM_001199397.3(NEK1):c.1266+277G>T rs28446375
NM_001199397.3(NEK1):c.1385A>T (p.Glu462Val)
NM_001199397.3(NEK1):c.1438C>T (p.Leu480=)
NM_001199397.3(NEK1):c.2316C>T (p.Ala772=) rs1580012426
NM_001199397.3(NEK1):c.2434+69_2434+70del rs547487676
NM_001199397.3(NEK1):c.3223-120del rs568558279
NM_001199397.3(NEK1):c.3374+9A>G
NM_001199397.3(NEK1):c.3584-281_3584-280dup rs35743529
NM_001199397.3(NEK1):c.501A>T (p.Pro167=) rs1580995784
NM_001199397.3(NEK1):c.81C>T (p.Gly27=)
NM_001199397.3(NEK1):c.9G>A (p.Lys3=) rs750123713

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