ClinVar Miner

List of variants in gene NPHP4 reported as benign for not provided

Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 81
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HGVS dbSNP gnomAD frequency
NM_015102.5(NPHP4):c.2817+62A>G rs1622955 0.92259
NM_015102.5(NPHP4):c.993-156G>A rs551207 0.85251
NM_015102.5(NPHP4):c.2818-2= rs1217117155 0.84829
NM_015102.5(NPHP4):c.136-110C>G rs4908639 0.84357
NM_015102.5(NPHP4):c.1956-127A>G rs3737234 0.83973
NM_015102.5(NPHP4):c.2612-33G>A rs3747989 0.83595
NM_015102.5(NPHP4):c.517+192G>T rs875574 0.66081
NM_015102.5(NPHP4):c.3231+41T>C rs868163 0.64813
NM_015102.5(NPHP4):c.517+107T>C rs875573 0.63893
NM_015102.5(NPHP4):c.4140+162A>C rs11121648 0.57251
NM_015102.5(NPHP4):c.993-184C>T rs10779677 0.52481
NM_015102.5(NPHP4):c.3044+97G>A rs1287638 0.52403
NM_015102.5(NPHP4):c.2818-62A>G rs963030 0.44157
NM_015102.5(NPHP4):c.-38-45G>C rs1295111 0.41599
NM_015102.5(NPHP4):c.1955+173T>C rs11122125 0.39381
NM_015102.5(NPHP4):c.2802C>T (p.Arg934=) rs3747992 0.36928
NM_015102.5(NPHP4):c.2818-241G>A rs959240 0.36481
NM_015102.5(NPHP4):c.2818-235dup rs544208468 0.36039
NM_015102.5(NPHP4):c.3570A>G (p.Glu1190=) rs555164 0.35094
NM_015102.5(NPHP4):c.3645-38C>T rs1287634 0.34998
NM_015102.5(NPHP4):c.3231+31A>G rs905467 0.20383
NM_015102.5(NPHP4):c.280-216A>G rs2275231 0.17593
NM_015102.5(NPHP4):c.1441+13A>G rs7520105 0.17476
NM_015102.5(NPHP4):c.673+150A>G rs61762129 0.15699
NM_015102.5(NPHP4):c.3472+62C>T rs2297791 0.13268
NM_015102.5(NPHP4):c.3558+59T>C rs12122135 0.12729
NM_015102.5(NPHP4):c.674-233C>T rs35471669 0.12629
NM_015102.5(NPHP4):c.3816+122C>T rs11121682 0.12193
NM_015102.5(NPHP4):c.2643G>A (p.Ala881=) rs3747990 0.11763
NM_015102.5(NPHP4):c.2485+38C>T rs41280814 0.11752
NM_015102.5(NPHP4):c.2485+129C>G rs41280812 0.11747
NM_015102.5(NPHP4):c.1926G>A (p.Glu642=) rs12120967 0.11732
NM_015102.5(NPHP4):c.3232-135T>C rs905469 0.09135
NM_015102.5(NPHP4):c.3316-177G>A rs78598342 0.05253
NM_015102.5(NPHP4):c.3996+128A>G rs12117328 0.05211
NM_015102.5(NPHP4):c.1470C>T (p.Leu490=) rs12116997 0.04804
NM_015102.5(NPHP4):c.453-170C>T rs75504751 0.04582
NM_015102.5(NPHP4):c.86C>T (p.Thr29Met) rs12142270 0.04382
NM_015102.5(NPHP4):c.3817-149T>G rs114555857 0.04345
NM_015102.5(NPHP4):c.1303-131T>C rs17432975 0.04108
NM_015102.5(NPHP4):c.3559-140C>T rs114968327 0.03291
NM_015102.5(NPHP4):c.136-224G>C rs114368032 0.03173
NM_015102.5(NPHP4):c.3817-162G>A rs11805141 0.03161
NM_015102.5(NPHP4):c.2724G>A (p.Ser908=) rs114545322 0.03032
NM_015102.5(NPHP4):c.1631C>G (p.Ala544Gly) rs12093500 0.02840
NM_015102.5(NPHP4):c.3645-180G>A rs114724221 0.02538
NM_015102.5(NPHP4):c.3044+47G>A rs12135056 0.02412
NM_015102.5(NPHP4):c.2304+98A>G rs12081133 0.02405
NM_015102.5(NPHP4):c.1442-189T>C rs72857418 0.02273
NM_015102.5(NPHP4):c.2219G>A (p.Arg740His) rs34248917 0.02256
NM_015102.5(NPHP4):c.3231+107C>T rs72856177 0.02031
NM_015102.5(NPHP4):c.*314T>G rs111874674 0.02020
NM_015102.5(NPHP4):c.3559-87G>A rs72856175 0.02014
NM_015102.5(NPHP4):c.3243G>C (p.Gly1081=) rs41280800 0.01658
NM_015102.5(NPHP4):c.1611+9C>T rs114900019 0.01637
NM_015102.5(NPHP4):c.279+47T>G rs115690090 0.01612
NM_015102.5(NPHP4):c.2542C>T (p.Arg848Trp) rs17472401 0.01606
NM_015102.5(NPHP4):c.2808G>A (p.Thr936=) rs17028857 0.01235
NM_015102.5(NPHP4):c.3479C>T (p.Pro1160Leu) rs113445782 0.01143
NM_015102.5(NPHP4):c.2031C>T (p.Pro677=) rs34373111 0.01102
NM_015102.5(NPHP4):c.1852G>A (p.Glu618Lys) rs571655 0.01009
NM_015102.5(NPHP4):c.3876C>T (p.Gly1292=) rs115526767 0.00982
NM_015102.5(NPHP4):c.993-56C>T rs182466746 0.00787
NM_015102.5(NPHP4):c.1542G>A (p.Pro514=) rs35264155 0.00677
NM_015102.5(NPHP4):c.3674C>T (p.Thr1225Met) rs144624477 0.00576
NM_015102.5(NPHP4):c.3894C>T (p.Ala1298=) rs60094861 0.00477
NM_015102.5(NPHP4):c.2812G>A (p.Val938Met) rs184961418 0.00460
NM_015102.5(NPHP4):c.279+11G>A rs113902159 0.00401
NM_015102.5(NPHP4):c.4237G>A (p.Asp1413Asn) rs115910810 0.00328
NM_015102.5(NPHP4):c.1966G>A (p.Asp656Asn) rs191602135 0.00050
NM_015102.5(NPHP4):c.3044+20C>T rs372051668 0.00019
NM_015102.5(NPHP4):c.122C>T (p.Pro41Leu) rs754311690 0.00011
NM_015102.5(NPHP4):c.1490C>G (p.Pro497Arg) rs375051705 0.00006
NM_015102.5(NPHP4):c.1503+73C>T rs116830098
NM_015102.5(NPHP4):c.1611+111C>A rs9628990
NM_015102.5(NPHP4):c.2612-55T>G rs3747988
NM_015102.5(NPHP4):c.3559-64del rs35241273
NM_015102.5(NPHP4):c.3817-169A>G rs1287635
NM_015102.5(NPHP4):c.452+60del rs34702999
NM_015102.5(NPHP4):c.453-127G>A rs12084942
NM_015102.5(NPHP4):c.992+195del rs147579829

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