ClinVar Miner

List of variants in gene PTPN11 reported as likely benign for not provided

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Gene type:
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Total variants: 62
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HGVS dbSNP gnomAD frequency
NM_002834.5(PTPN11):c.*32+267C>T rs76662479 0.02729
NM_002834.5(PTPN11):c.854-223C>T rs73209632 0.02415
NM_002834.5(PTPN11):c.643-340T>C rs11066313 0.02313
NM_002834.5(PTPN11):c.255C>T (p.His85=) rs61736914 0.02271
NM_002834.5(PTPN11):c.525+12G>C rs41304351 0.01035
NM_002834.5(PTPN11):c.1599+229G>A rs7974468 0.00904
NM_002834.5(PTPN11):c.525+78A>G rs114073655 0.00844
NM_002834.5(PTPN11):c.1379+308C>T rs116680276 0.00399
NM_002834.5(PTPN11):c.526-8C>A rs184804143 0.00064
NM_002834.5(PTPN11):c.1658C>T (p.Thr553Met) rs148176616 0.00048
NM_002834.5(PTPN11):c.642+41T>G rs375023869 0.00043
NM_002834.5(PTPN11):c.48A>G (p.Ala16=) rs372736227 0.00029
NM_002834.5(PTPN11):c.925A>G (p.Ile309Val) rs201787206 0.00026
NM_002834.5(PTPN11):c.1447+28C>T rs370390890 0.00015
NM_002834.5(PTPN11):c.1746C>T (p.Asn582=) rs397516800 0.00013
NM_002834.5(PTPN11):c.558G>T (p.Arg186=) rs200920312 0.00011
NM_002834.5(PTPN11):c.1449T>G (p.Gly483=) rs143238917 0.00009
NM_002834.5(PTPN11):c.486C>T (p.Asp162=) rs397507522 0.00009
NM_002834.5(PTPN11):c.1362G>A (p.Pro454=) rs771967829 0.00008
NM_002834.5(PTPN11):c.1740T>C (p.Tyr580=) rs139188627 0.00008
NM_002834.5(PTPN11):c.1678C>T (p.Leu560Phe) rs397516797 0.00007
NM_002834.5(PTPN11):c.132C>T (p.Ser44=) rs397507502 0.00006
NM_002834.5(PTPN11):c.1682C>T (p.Pro561Leu) rs141140214 0.00006
NM_002834.5(PTPN11):c.392A>G (p.Lys131Arg) rs397516805 0.00006
NM_002834.5(PTPN11):c.426C>T (p.Ser142=) rs199498784 0.00006
NM_002834.5(PTPN11):c.616T>C (p.Leu206=) rs78376169 0.00006
NM_002834.5(PTPN11):c.990A>C (p.Thr330=) rs369739920 0.00005
NM_002834.5(PTPN11):c.1143C>T (p.Gly381=) rs781677115 0.00004
NM_002834.5(PTPN11):c.1278C>T (p.His426=) rs886038519 0.00004
NM_002834.5(PTPN11):c.540C>T (p.Asp180=) rs753269427 0.00003
NM_002834.5(PTPN11):c.137+42A>G rs537273886 0.00002
NM_002834.5(PTPN11):c.1649C>T (p.Ala550Val) rs767712281 0.00002
NM_002834.5(PTPN11):c.1011G>A (p.Thr337=) rs371951288 0.00001
NM_002834.5(PTPN11):c.1023T>C (p.Phe341=) rs762516252 0.00001
NM_002834.5(PTPN11):c.1048T>G (p.Ser350Ala) rs146571700 0.00001
NM_002834.5(PTPN11):c.1131A>C (p.Leu377=) rs370059077 0.00001
NM_002834.5(PTPN11):c.1173C>T (p.Ser391=) rs770730416 0.00001
NM_002834.5(PTPN11):c.324C>A (p.Thr108=) rs1352499844 0.00001
NM_002834.5(PTPN11):c.537C>T (p.Tyr179=) rs141015445 0.00001
NM_002834.5(PTPN11):c.996C>T (p.Gly332=) rs397507533 0.00001
NM_002834.5(PTPN11):c.*1157ATG[17] rs80269561
NM_002834.5(PTPN11):c.*33-144del rs1191524369
NM_002834.5(PTPN11):c.*33-145_*33-144dup rs1191524369
NM_002834.5(PTPN11):c.*33-17_*33-13del rs730880991
NM_002834.5(PTPN11):c.*6C>T rs2135930915
NM_002834.5(PTPN11):c.1098A>G (p.Lys366=) rs2135906673
NM_002834.5(PTPN11):c.114T>G (p.Pro38=) rs758209360
NM_002834.5(PTPN11):c.1212A>C (p.Ser404=) rs1592850343
NM_002834.5(PTPN11):c.1281C>T (p.Gly427=) rs753173299
NM_002834.5(PTPN11):c.1362G>C (p.Pro454=)
NM_002834.5(PTPN11):c.138-216del rs369558589
NM_002834.5(PTPN11):c.1479C>G (p.Thr493=) rs1592854511
NM_002834.5(PTPN11):c.1599+4C>A rs142606486
NM_002834.5(PTPN11):c.1653C>T (p.Asp551=) rs2135928776
NM_002834.5(PTPN11):c.333-262dup rs200651902
NM_002834.5(PTPN11):c.393A>G (p.Lys131=) rs1592828825
NM_002834.5(PTPN11):c.432T>C (p.Pro144=)
NM_002834.5(PTPN11):c.525+275del rs376601242
NM_002834.5(PTPN11):c.525+275dup rs376601242
NM_002834.5(PTPN11):c.526-33_526-31del rs142777663
NM_002834.5(PTPN11):c.642+158_642+159dup rs753974743
NM_002834.5(PTPN11):c.643-62dup rs140552217

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