ClinVar Miner

List of variants in gene SCN1A reported as likely benign for not provided

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Gene type:
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Total variants: 98
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HGVS dbSNP gnomAD frequency
NM_001165963.4(SCN1A):c.2176+17A>G rs59251406 0.03846
NM_001165963.4(SCN1A):c.1663-278C>T rs115015575 0.02948
NM_001165963.4(SCN1A):c.2946+77A>G rs116647099 0.02481
NM_001165963.4(SCN1A):c.474-333T>G rs76716692 0.02318
NM_001165963.4(SCN1A):c.2947-125G>T rs41265139 0.00989
NM_001165963.4(SCN1A):c.964+185T>A rs73022800 0.00872
NM_001165963.4(SCN1A):c.2590-227A>G rs142984238 0.00619
NM_001165963.4(SCN1A):c.265-226T>C rs141977446 0.00447
NM_001165963.4(SCN1A):c.1131A>C (p.Arg377=) rs114137271 0.00322
NM_001165963.4(SCN1A):c.2889T>C (p.Ala963=) rs144679294 0.00321
NM_001165963.4(SCN1A):c.1625G>A (p.Arg542Gln) rs121918817 0.00154
NM_001165963.4(SCN1A):c.68C>T (p.Ala23Val) rs139397227 0.00138
NM_001165963.4(SCN1A):c.2176+44C>T rs75022359 0.00113
NM_001165963.4(SCN1A):c.1811G>A (p.Arg604His) rs121918769 0.00087
NM_001165963.4(SCN1A):c.1171-25A>G rs199556404 0.00053
NM_001165963.4(SCN1A):c.2415+38A>G rs367846035 0.00032
NM_001165963.4(SCN1A):c.384-21T>A rs373168416 0.00026
NM_001165963.4(SCN1A):c.694+10A>G rs373417440 0.00019
NM_001165963.4(SCN1A):c.1710C>T (p.Ser570=) rs770432127 0.00018
NM_001165963.4(SCN1A):c.2177-43G>A rs767120609 0.00018
NM_001165963.4(SCN1A):c.1378-3T>C rs150964803 0.00016
NM_001165963.4(SCN1A):c.1889G>A (p.Arg630Gln) rs145670933 0.00016
NM_001165963.4(SCN1A):c.1410C>T (p.Ser470=) rs142571794 0.00015
NM_001165963.4(SCN1A):c.1790C>A (p.Thr597Asn) rs149715258 0.00014
NM_001165963.4(SCN1A):c.2770G>A (p.Ala924Thr) rs141950573 0.00014
NM_001165963.4(SCN1A):c.579C>T (p.Leu193=) rs116478064 0.00014
NM_001165963.4(SCN1A):c.1080T>C (p.Tyr360=) rs371270088 0.00013
NM_001165963.4(SCN1A):c.1680T>C (p.Arg560=) rs145662732 0.00011
NM_001165963.4(SCN1A):c.1739G>A (p.Arg580Gln) rs544692790 0.00011
NM_001165963.4(SCN1A):c.379C>G (p.His127Asp) rs148442069 0.00011
NM_001165963.4(SCN1A):c.2811C>T (p.Phe937=) rs558678383 0.00010
NM_001165963.4(SCN1A):c.597A>G (p.Thr199=) rs398123600 0.00010
NM_001165963.4(SCN1A):c.1624C>A (p.Arg542=) rs138877187 0.00008
NM_001165963.4(SCN1A):c.1028+35T>C rs148126815 0.00006
NM_001165963.4(SCN1A):c.1803C>T (p.Asn601=) rs139403702 0.00006
NM_001165963.4(SCN1A):c.333A>G (p.Leu111=) rs201592683 0.00006
NM_001165963.4(SCN1A):c.80G>C (p.Arg27Thr) rs121917906 0.00006
NM_001165963.4(SCN1A):c.1440A>C (p.Ser480=) rs201383347 0.00005
NM_001165963.4(SCN1A):c.1499G>A (p.Arg500Gln) rs200176684 0.00005
NM_001165963.4(SCN1A):c.2057A>C (p.Glu686Ala) rs374767754 0.00005
NM_001165963.4(SCN1A):c.2094C>T (p.His698=) rs372260058 0.00005
NM_001165963.4(SCN1A):c.3060C>A (p.His1020Gln) rs150154265 0.00005
NM_001165963.4(SCN1A):c.2947-12G>A rs371041932 0.00004
NM_001165963.4(SCN1A):c.429G>A (p.Val143=) rs1050330603 0.00004
NM_001165963.4(SCN1A):c.1029-11C>G rs561758475 0.00003
NM_001165963.4(SCN1A):c.1388C>T (p.Thr463Met) rs752591998 0.00003
NM_001165963.4(SCN1A):c.144C>T (p.Gly48=) rs886043534 0.00003
NM_001165963.4(SCN1A):c.1980T>G (p.Pro660=) rs1379958414 0.00002
NM_001165963.4(SCN1A):c.2078G>T (p.Arg693Met) rs750260160 0.00002
NM_001165963.4(SCN1A):c.2378C>T (p.Thr793Met) rs762038032 0.00002
NM_001165963.4(SCN1A):c.2577T>C (p.Arg859=) rs569598595 0.00002
NM_001165963.4(SCN1A):c.2715C>T (p.Ala905=) rs778280690 0.00002
NM_001165963.4(SCN1A):c.2838C>T (p.Arg946=) rs764174474 0.00002
NM_001165963.4(SCN1A):c.2947-7T>G rs913084871 0.00002
NM_001165963.4(SCN1A):c.670T>C (p.Leu224=) rs764891727 0.00002
NM_001165963.4(SCN1A):c.765G>A (p.Val255=) rs377331238 0.00002
NM_001165963.4(SCN1A):c.777C>T (p.Ser259=) rs121918735 0.00002
NM_001165963.4(SCN1A):c.1225T>C (p.Leu409=) rs770033555 0.00001
NM_001165963.4(SCN1A):c.1842C>T (p.His614=) rs370463183 0.00001
NM_001165963.4(SCN1A):c.1895T>A (p.Leu632Gln) rs201987598 0.00001
NM_001165963.4(SCN1A):c.1910C>T (p.Ala637Val) rs1266240114 0.00001
NM_001165963.4(SCN1A):c.1928G>A (p.Ser643Asn) rs369178649 0.00001
NM_001165963.4(SCN1A):c.201C>T (p.Asp67=) rs1331936581 0.00001
NM_001165963.4(SCN1A):c.228C>G (p.Pro76=) rs1173774565 0.00001
NM_001165963.4(SCN1A):c.2520G>T (p.Val840=) rs757851017 0.00001
NM_001165963.4(SCN1A):c.2721C>T (p.Val907=) rs748504238 0.00001
NM_001165963.4(SCN1A):c.2898C>T (p.Ala966=) rs774054004 0.00001
NM_001165963.4(SCN1A):c.558T>C (p.Leu186=) rs539168834 0.00001
NM_001165963.4(SCN1A):c.606C>T (p.Tyr202=) rs374555589 0.00001
NM_001165963.4(SCN1A):c.643T>C (p.Leu215=) rs779837260 0.00001
NM_001165963.4(SCN1A):c.678G>A (p.Thr226=) rs571355844 0.00001
NM_001165963.4(SCN1A):c.694+9A>G rs754260524 0.00001
NM_001165963.4(SCN1A):c.846C>A (p.Pro282=) rs1352832546 0.00001
NM_001165963.4(SCN1A):c.1098T>C (p.Asp366=) rs121917958
NM_001165963.4(SCN1A):c.1171-132del rs202157655
NM_001165963.4(SCN1A):c.1182T>C (p.Ala394=)
NM_001165963.4(SCN1A):c.1191A>G (p.Lys397=)
NM_001165963.4(SCN1A):c.135C>T (p.Asp45=) rs201985242
NM_001165963.4(SCN1A):c.1378-153_1378-152del rs5836074
NM_001165963.4(SCN1A):c.1548T>C (p.Asp516=) rs1057524611
NM_001165963.4(SCN1A):c.2044-5del rs549232924
NM_001165963.4(SCN1A):c.2044-5dup rs549232924
NM_001165963.4(SCN1A):c.2095G>A (p.Val699Ile) rs1260934774
NM_001165963.4(SCN1A):c.2177-11dup rs11394960
NM_001165963.4(SCN1A):c.2177-7A>T rs768129301
NM_001165963.4(SCN1A):c.2177-8dup rs747086735
NM_001165963.4(SCN1A):c.2343T>C (p.Asn781=) rs1574202373
NM_001165963.4(SCN1A):c.237C>T (p.Asp79=) rs1276982403
NM_001165963.4(SCN1A):c.249C>T (p.Tyr83=)
NM_001165963.4(SCN1A):c.2589+19del rs3032638
NM_001165963.4(SCN1A):c.2667T>C (p.Ala889=) rs1206449277
NM_001165963.4(SCN1A):c.2946+10C>T rs1574179707
NM_001165963.4(SCN1A):c.2946+4T>C rs1390205269
NM_001165963.4(SCN1A):c.495T>C (p.Tyr165=) rs547496777
NM_001165963.4(SCN1A):c.633T>C (p.Asn211=)
NM_001165963.4(SCN1A):c.717C>A (p.Ala239=) rs759923734
NM_001165963.4(SCN1A):c.861G>A (p.Leu287=) rs568461410
NM_001165963.4(SCN1A):c.873T>C (p.Ser291=) rs1007259779

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