ClinVar Miner

List of variants in gene SCN3A reported as benign for not provided

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Gene type:
ClinVar version:
Total variants: 96
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HGVS dbSNP gnomAD frequency
NM_006922.4(SCN3A):c.2020-209A>G rs10048748 0.82076
NM_006922.4(SCN3A):c.1380+183C>A rs7561140 0.73045
NM_006922.4(SCN3A):c.1173+69G>A rs3731760 0.72428
NM_006922.4(SCN3A):c.1032-218C>T rs13011371 0.62382
NM_006922.4(SCN3A):c.2031A>T (p.Thr677=) rs1946892 0.51537
NM_006922.4(SCN3A):c.2020-163T>A rs2289400 0.50174
NM_006922.4(SCN3A):c.2020-221A>C rs2289401 0.29492
NM_006922.4(SCN3A):c.3515-132A>T rs3213904 0.25775
NM_006922.4(SCN3A):c.695-46A>G rs9333576 0.22613
NM_006922.4(SCN3A):c.967+76G>T rs11887343 0.22595
NM_006922.4(SCN3A):c.474-218C>A rs11903799 0.22550
NM_006922.4(SCN3A):c.474-171G>A rs11903711 0.22536
NM_006922.4(SCN3A):c.1031+191T>C rs6710092 0.22529
NM_006922.4(SCN3A):c.1031+181A>C rs59172781 0.22526
NM_006922.4(SCN3A):c.603-76G>A rs2304710 0.22522
NM_006922.4(SCN3A):c.1031+182A>T rs56124029 0.22520
NM_006922.4(SCN3A):c.602+9C>T rs7579000 0.22520
NM_006922.4(SCN3A):c.473+72C>T rs4667795 0.22512
NM_006922.4(SCN3A):c.968-20G>T rs11887309 0.22426
NM_006922.4(SCN3A):c.383+236C>T rs11891394 0.22383
NM_006922.4(SCN3A):c.383+81C>T rs3754962 0.22379
NM_006922.4(SCN3A):c.265-129A>T rs3754960 0.22355
NM_006922.4(SCN3A):c.265-118T>C rs3754961 0.22347
NM_006922.4(SCN3A):c.1381-157A>G rs16850134 0.22002
NM_006922.4(SCN3A):c.1441C>T (p.Leu481=) rs16850131 0.21998
NM_006922.4(SCN3A):c.1381-34G>A rs58539679 0.21988
NM_006922.4(SCN3A):c.4431+125T>C rs77002577 0.19189
NM_006922.4(SCN3A):c.4239+180A>G rs1439993 0.16888
NM_006922.4(SCN3A):c.2547A>C (p.Val849=) rs62174900 0.16330
NM_006922.4(SCN3A):c.2392-95G>T rs78280506 0.16158
NM_006922.4(SCN3A):c.2020-164T>A rs79777698 0.09288
NM_006922.4(SCN3A):c.1380+107del rs77984476 0.05453
NM_006922.4(SCN3A):c.4293+141T>C rs76493643 0.03184
NM_006922.4(SCN3A):c.5121C>A (p.Thr1707=) rs11885001 0.02730
NM_006922.4(SCN3A):c.3843+202A>G rs73019878 0.02563
NM_006922.4(SCN3A):c.5859C>T (p.Ser1953=) rs76096365 0.02293
NM_006922.4(SCN3A):c.2020-92T>C rs58549257 0.01854
NM_006922.4(SCN3A):c.1031+75T>C rs73021824 0.01743
NM_006922.4(SCN3A):c.4878C>T (p.Ala1626=) rs139100138 0.01577
NM_006922.4(SCN3A):c.5584G>T (p.Gly1862Cys) rs41265137 0.01346
NM_006922.4(SCN3A):c.4807+7A>G rs113867009 0.01340
NM_006922.4(SCN3A):c.552G>A (p.Thr184=) rs116682517 0.00839
NM_006922.4(SCN3A):c.4432-14T>C rs73969177 0.00780
NM_006922.4(SCN3A):c.5670T>C (p.Pro1890=) rs73969174 0.00763
NM_006922.4(SCN3A):c.3250G>A (p.Val1084Ile) rs140990288 0.00518
NM_006922.4(SCN3A):c.968-52A>G rs139112716 0.00404
NM_006922.4(SCN3A):c.4476T>C (p.Tyr1492=) rs16850096 0.00337
NM_006922.4(SCN3A):c.171T>C (p.Ala57=) rs111389453 0.00278
NM_006922.4(SCN3A):c.265-17C>T rs188275817 0.00168
NM_006922.4(SCN3A):c.2118G>A (p.Val706=) rs143450450 0.00160
NM_006922.4(SCN3A):c.5952C>T (p.Asp1984=) rs145197227 0.00156
NM_006922.4(SCN3A):c.1380+12T>C rs146105464 0.00125
NM_006922.4(SCN3A):c.5220C>T (p.Asp1740=) rs141247068 0.00115
NM_006922.4(SCN3A):c.2304T>C (p.Ile768=) rs72870766 0.00072
NM_006922.4(SCN3A):c.44G>A (p.Arg15His) rs139769668 0.00064
NM_006922.4(SCN3A):c.5658C>T (p.Val1886=) rs141161490 0.00063
NM_006922.4(SCN3A):c.999C>T (p.Asp333=) rs142239226 0.00057
NM_006922.4(SCN3A):c.1381-4A>G rs199597878 0.00053
NM_006922.4(SCN3A):c.642G>A (p.Ala214=) rs575814709 0.00048
NM_006922.4(SCN3A):c.5407G>A (p.Asp1803Asn) rs3731762 0.00040
NM_006922.4(SCN3A):c.5232A>G (p.Pro1744=) rs144587694 0.00035
NM_006922.4(SCN3A):c.3669+13C>T rs375767100 0.00027
NM_006922.4(SCN3A):c.2020-17C>A rs376457992 0.00024
NM_006922.4(SCN3A):c.363T>C (p.Ala121=) rs145171998 0.00019
NM_006922.4(SCN3A):c.2003G>A (p.Gly668Glu) rs199975643 0.00016
NM_006922.4(SCN3A):c.2565+14T>C rs200810905 0.00016
NM_006922.4(SCN3A):c.2181G>A (p.Pro727=) rs138350988 0.00015
NM_006922.4(SCN3A):c.207T>A (p.Pro69=) rs754282083 0.00013
NM_006922.4(SCN3A):c.3967-15C>T rs200219453 0.00013
NM_006922.4(SCN3A):c.265-16G>A rs138995363 0.00006
NM_006922.4(SCN3A):c.4899T>A (p.Arg1633=) rs748935500 0.00005
NM_006922.4(SCN3A):c.1329C>T (p.Ala443=) rs200595385 0.00004
NM_006922.4(SCN3A):c.5502T>C (p.Leu1834=) rs539692171 0.00003
NM_006922.4(SCN3A):c.2392-9A>G rs199781617 0.00001
NM_006922.4(SCN3A):c.2949G>A (p.Leu983=) rs758954102 0.00001
NM_006922.4(SCN3A):c.4389C>T (p.Phe1463=) rs543590722 0.00001
GRCh37/hg19 2q24.3(chr2:166002351-166016247)x3
GRCh37/hg19 2q24.3(chr2:166003479-166020295)x3
GRCh37/hg19 2q24.3(chr2:166015189-166020295)x3
NM_006922.4(SCN3A):c.1031+115A>G rs6756990
NM_006922.4(SCN3A):c.1031+44dup rs60156545
NM_006922.4(SCN3A):c.127_129del (p.Asn43del) rs72471101
NM_006922.4(SCN3A):c.1617C>T (p.Phe539=)
NM_006922.4(SCN3A):c.2565+11AT[5] rs202076476
NM_006922.4(SCN3A):c.264+36del rs142913830
NM_006922.4(SCN3A):c.3514+208dup rs35605491
NM_006922.4(SCN3A):c.3837C>T (p.Ile1279=) rs756134954
NM_006922.4(SCN3A):c.384-82C>T rs4667796
NM_006922.4(SCN3A):c.3844-11del rs71028466
NM_006922.4(SCN3A):c.3844-12_3844-11del
NM_006922.4(SCN3A):c.3844-19dup rs71028466
NM_006922.4(SCN3A):c.4041G>A (p.Leu1347=)
NM_006922.4(SCN3A):c.4764C>G (p.Gly1588=) rs564019672
NM_006922.4(SCN3A):c.603-153G>A
NM_006922.4(SCN3A):c.968-11del rs565048561
NM_006922.4(SCN3A):c.968-11dup rs565048561

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