ClinVar Miner

List of variants in gene SCN5A reported as benign for not provided

Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 163
Download table as spreadsheet
HGVS dbSNP gnomAD frequency
NM_000335.5(SCN5A):c.2437-97T>C rs7645173 0.93087
NM_000335.5(SCN5A):c.2436+230G>T rs7432532 0.89709
NM_000335.5(SCN5A):c.703+263C>T rs9851962 0.84039
NM_000335.5(SCN5A):c.935-219A>G rs9873213 0.83625
NM_000335.5(SCN5A):c.87A>G (p.Ala29=) rs6599230 0.80621
NM_000335.5(SCN5A):c.1140+98G>A rs6599222 0.79961
NM_000335.5(SCN5A):c.393-184A>C rs7431305 0.66580
NM_000335.5(SCN5A):c.2436+249T>C rs11711097 0.61790
NM_000335.5(SCN5A):c.1141-141C>G rs6770569 0.49038
NM_000335.5(SCN5A):c.4243-181T>C rs6804918 0.48220
NM_000335.5(SCN5A):c.482+184G>A rs6781731 0.46891
NM_000335.5(SCN5A):c.*123A>G rs7429945 0.44373
NM_000335.5(SCN5A):c.*963C>T rs4073796 0.44325
NM_000335.5(SCN5A):c.5454T>C (p.Asp1818=) rs1805126 0.44288
NM_000335.5(SCN5A):c.4811-894A>G rs7373779 0.44041
NM_000335.5(SCN5A):c.1339-226G>A rs55899887 0.42441
NM_000335.5(SCN5A):c.4435-307T>C rs7645178 0.41191
NM_000335.5(SCN5A):c.4243-262C>T rs6793245 0.40755
NM_000335.5(SCN5A):c.2437-293T>C rs7645358 0.27998
NM_000335.5(SCN5A):c.1673A>G (p.His558Arg) rs1805124 0.24768
NM_000335.5(SCN5A):c.612-318G>A rs9856587 0.23903
NM_000335.5(SCN5A):c.*1453dup rs397763929 0.23236
NM_000335.5(SCN5A):c.*1537T>C rs41315485 0.21494
NM_000335.5(SCN5A):c.1339-24G>A rs7428779 0.18664
NM_000335.5(SCN5A):c.392+328G>A rs73056438 0.17192
NM_000335.5(SCN5A):c.612-2574T>A rs11710077 0.17009
NM_000335.5(SCN5A):c.1141-3C>A rs41312433 0.16821
NM_000335.5(SCN5A):c.392+242T>C rs45567533 0.13444
NM_000335.5(SCN5A):c.1518+221G>A rs13084981 0.11907
NM_000335.5(SCN5A):c.3663+1472G>A rs6772948 0.11840
NM_000335.5(SCN5A):c.2787+254A>G rs7432766 0.11361
NM_000335.5(SCN5A):c.-52-140G>A rs11719543 0.10646
NM_000335.5(SCN5A):c.4434+65G>A rs41315507 0.10610
NM_000335.5(SCN5A):c.4296+323C>T rs45505695 0.10600
NM_000335.5(SCN5A):c.1519-178T>C rs34535972 0.09833
NM_000335.5(SCN5A):c.4297-266G>A rs7374391 0.09547
NM_000335.5(SCN5A):c.*753C>T rs41310757 0.08896
NM_000335.5(SCN5A):c.4296+263G>A rs41312389 0.08427
NM_000335.5(SCN5A):c.5841C>T (p.Ile1947=) rs13324293 0.06728
NM_000335.5(SCN5A):c.935-199T>G rs13315133 0.06552
NM_000335.5(SCN5A):c.274-24C>T rs7627488 0.06378
NM_000335.5(SCN5A):c.3508+72T>C rs41312403 0.05829
NM_000335.5(SCN5A):c.4845C>T (p.Phe1615=) rs41315495 0.05498
NM_000335.5(SCN5A):c.392+34C>A rs41312963 0.04655
NM_000335.5(SCN5A):c.3960+105G>A rs9824500 0.04230
NM_000335.5(SCN5A):c.273+51G>A rs41261744 0.04123
NM_000335.5(SCN5A):c.935-267G>C rs13322122 0.03982
NM_000335.5(SCN5A):c.274-25G>A rs7636280 0.03831
NM_000335.5(SCN5A):c.100C>T (p.Arg34Cys) rs6791924 0.03086
NM_000335.5(SCN5A):c.703+45C>A rs41314302 0.02863
NM_000335.5(SCN5A):c.4435-94T>C rs9825620 0.02689
NM_000335.5(SCN5A):c.4810+215T>C rs7431641 0.02688
NM_000335.5(SCN5A):c.4539+86A>G rs12715317 0.02682
NM_000335.5(SCN5A):c.4810+164C>G rs7429347 0.02681
NM_000335.5(SCN5A):c.4810+262A>C rs7432127 0.02681
NM_000335.5(SCN5A):c.4539+339A>C rs12715315 0.02680
NM_000335.5(SCN5A):c.4539+293A>G rs12715316 0.02673
NM_000335.5(SCN5A):c.2263-18T>C rs9835588 0.02184
NM_000335.5(SCN5A):c.-53+114C>T rs41310236 0.01950
NM_000335.5(SCN5A):c.482+16G>C rs41312949 0.01894
NM_000335.5(SCN5A):c.1302C>T (p.Phe434=) rs41313699 0.01360
NM_000335.5(SCN5A):c.1571C>A (p.Ser524Tyr) rs41313691 0.01184
NM_000335.5(SCN5A):c.4215G>A (p.Gly1405=) rs41311123 0.00859
NM_000335.5(SCN5A):c.1587T>C (p.Ile529=) rs45624133 0.00575
NM_000335.5(SCN5A):c.1743G>A (p.Ser581=) rs41313687 0.00537
NM_000335.5(SCN5A):c.3508+10C>T rs41258454 0.00510
NM_000335.5(SCN5A):c.717C>T (p.Ile239=) rs41285129 0.00407
NM_000335.5(SCN5A):c.1441C>T (p.Arg481Trp) rs144511230 0.00372
NM_000335.5(SCN5A):c.4434+13C>T rs148598985 0.00361
NM_000335.5(SCN5A):c.1017C>T (p.Tyr339=) rs17215493 0.00354
NM_000335.5(SCN5A):c.1381T>G (p.Leu461Val) rs41313697 0.00352
NM_000335.5(SCN5A):c.1569T>A (p.Arg523=) rs41313693 0.00351
NM_000335.5(SCN5A):c.4506C>T (p.Ser1502=) rs45548237 0.00350
NM_000335.5(SCN5A):c.1068T>C (p.Asp356=) rs41313703 0.00349
NM_000335.5(SCN5A):c.2436+12G>A rs41312419 0.00284
NM_000335.5(SCN5A):c.486C>T (p.Tyr162=) rs45489099 0.00267
NM_000335.5(SCN5A):c.1890+14G>A rs145427253 0.00252
NM_000335.5(SCN5A):c.4821C>T (p.Leu1607=) rs45437099 0.00242
NM_000335.5(SCN5A):c.3575G>A (p.Arg1192Gln) rs41261344 0.00222
NM_000335.5(SCN5A):c.354C>T (p.His118=) rs45533640 0.00207
NM_000335.5(SCN5A):c.1681C>T (p.Leu561=) rs45522138 0.00196
NM_000335.5(SCN5A):c.6007T>C (p.Phe2003Leu) rs41311117 0.00192
NM_000335.5(SCN5A):c.1852C>T (p.Leu618Phe) rs45488304 0.00178
NM_000335.5(SCN5A):c.3919C>T (p.Leu1307Phe) rs41313031 0.00144
NM_000335.5(SCN5A):c.4297-14T>C rs56104887 0.00117
NM_000335.5(SCN5A):c.1967C>T (p.Pro656Leu) rs41313681 0.00115
NM_000335.5(SCN5A):c.1236C>T (p.Val412=) rs45565936 0.00114
NM_000335.5(SCN5A):c.3870G>A (p.Leu1290=) rs41313033 0.00113
NM_000335.5(SCN5A):c.856G>T (p.Ala286Ser) rs61746118 0.00089
NM_000335.5(SCN5A):c.2437-13C>T rs45455099 0.00076
NM_000335.5(SCN5A):c.5793G>A (p.Ala1931=) rs200594132 0.00070
NM_000335.5(SCN5A):c.659C>T (p.Thr220Ile) rs45620037 0.00068
NM_000335.5(SCN5A):c.630G>A (p.Val210=) rs193922727 0.00064
NM_000335.5(SCN5A):c.5357G>A (p.Ser1786Asn) rs199473316 0.00063
NM_000335.5(SCN5A):c.568C>G (p.Arg190Gly) rs199473068 0.00057
NM_000335.5(SCN5A):c.1335C>T (p.His445=) rs368045716 0.00048
NM_000335.5(SCN5A):c.3875T>C (p.Phe1292Ser) rs41311127 0.00048
NM_000335.5(SCN5A):c.2437-5C>A rs72549411 0.00045
NM_000335.5(SCN5A):c.1044C>T (p.Pro348=) rs370346797 0.00043
NM_000335.5(SCN5A):c.1479G>A (p.Arg493=) rs138870926 0.00043
NM_000335.5(SCN5A):c.5709G>A (p.Ser1903=) rs376826051 0.00034
NM_000335.5(SCN5A):c.858G>A (p.Ala286=) rs368460145 0.00032
NM_000335.5(SCN5A):c.456C>T (p.Asp152=) rs190803993 0.00031
NM_000335.5(SCN5A):c.3388-16A>T rs376625229 0.00029
NM_000335.5(SCN5A):c.3837+17G>A rs45466091 0.00029
NM_000335.5(SCN5A):c.4200C>T (p.Asn1400=) rs778436757 0.00013
NM_000335.5(SCN5A):c.1152C>T (p.Ser384=) rs372970828 0.00011
NM_000335.5(SCN5A):c.2151G>A (p.Pro717=) rs191840835 0.00011
NM_000335.5(SCN5A):c.5364C>T (p.Asp1788=) rs375752426 0.00011
NM_000335.5(SCN5A):c.1338+20G>A rs45626543 0.00010
NM_000335.5(SCN5A):c.4299T>C (p.Tyr1433=) rs200556220 0.00010
NM_000335.5(SCN5A):c.3388-7T>C rs41310769 0.00009
NM_000335.5(SCN5A):c.3618C>T (p.Phe1206=) rs184934308 0.00009
NM_000335.5(SCN5A):c.5283C>T (p.Ile1761=) rs375323548 0.00009
NM_000335.5(SCN5A):c.3723C>T (p.Ala1241=) rs61737829 0.00006
NM_000335.5(SCN5A):c.1755C>T (p.His585=) rs201024847 0.00005
NM_000335.5(SCN5A):c.357C>G (p.Pro119=) rs749556647 0.00004
NM_000335.5(SCN5A):c.3993G>A (p.Pro1331=) rs775789293 0.00004
NM_000335.5(SCN5A):c.42C>T (p.Arg14=) rs183988524 0.00004
NM_000335.5(SCN5A):c.435C>T (p.Cys145=) rs587781159 0.00004
NM_000335.5(SCN5A):c.5604C>T (p.Asp1868=) rs560476223 0.00004
NM_000335.5(SCN5A):c.954C>T (p.Asn318=) rs372623225 0.00004
NM_000335.5(SCN5A):c.1188C>T (p.Val396=) rs749683415 0.00003
NM_000335.5(SCN5A):c.3508+11G>A rs200058362 0.00003
NM_000335.5(SCN5A):c.3831C>T (p.Ile1277=) rs778600514 0.00003
NM_000335.5(SCN5A):c.552C>T (p.His184=) rs770959082 0.00003
NM_000335.5(SCN5A):c.2014G>A (p.Ala672Thr) rs199473140 0.00002
NM_000335.5(SCN5A):c.453C>T (p.His151=) rs199996750 0.00002
NM_000335.5(SCN5A):c.1638T>C (p.Asp546=) rs771534167 0.00001
NM_000335.5(SCN5A):c.2013C>T (p.Ser671=) rs751050999 0.00001
NM_000335.5(SCN5A):c.2070C>T (p.Leu690=) rs760619257 0.00001
NM_000335.5(SCN5A):c.3388-15C>T rs781185727 0.00001
NM_000335.5(SCN5A):c.4435-13C>T rs768122161 0.00001
NM_000335.5(SCN5A):c.4533G>A (p.Arg1511=) rs372874010 0.00001
NM_000335.5(SCN5A):c.483-18C>T rs41311081 0.00001
NM_000335.5(SCN5A):c.5235C>T (p.Ala1745=) rs1226880121 0.00001
NM_000335.5(SCN5A):c.5664C>T (p.Tyr1888=) rs1438433663 0.00001
NM_000335.5(SCN5A):c.5772C>G (p.Ser1924=) rs199687668 0.00001
NM_000335.5(SCN5A):c.6000C>T (p.Leu2000=) rs538707712 0.00001
NM_000335.5(SCN5A):c.687T>C (p.Thr229=) rs770390440 0.00001
NM_000335.5(SCN5A):c.*962T>A rs4073797
NM_000335.5(SCN5A):c.1110G>A (p.Thr370=) rs202025024
NM_000335.5(SCN5A):c.141C>G (p.Pro47=) rs571894716
NM_000335.5(SCN5A):c.1715C>A (p.Ala572Asp) rs36210423
NM_000335.5(SCN5A):c.2437-127dup rs41258204
NM_000335.5(SCN5A):c.2437-128_2437-127dup rs41258204
NM_000335.5(SCN5A):c.2437-7T>C rs1012068196
NM_000335.5(SCN5A):c.2787+175del rs35710045
NM_000335.5(SCN5A):c.3468C>T (p.Leu1156=) rs570719978
NM_000335.5(SCN5A):c.3509-184T>C rs6599213
NM_000335.5(SCN5A):c.4071G>A (p.Gly1357=) rs780532060
NM_000335.5(SCN5A):c.4242+82A>G rs6799868
NM_000335.5(SCN5A):c.4296+116G>A rs41312391
NM_000335.5(SCN5A):c.4540-10C>A rs750747122
NM_000335.5(SCN5A):c.4811-89_4811-86dup rs34532982
NM_000335.5(SCN5A):c.4811-89_4811-87dup rs34532982
NM_000335.5(SCN5A):c.4811-89_4811-88dup rs34532982
NM_000335.5(SCN5A):c.4811-89dup rs34532982
NM_000335.5(SCN5A):c.5848G>T (p.Val1950Leu) rs41315493
NM_000335.5(SCN5A):c.704-10C>T rs1320794792
NM_000335.5(SCN5A):c.795C>T (p.Ala265=) rs527692731
NM_000335.5(SCN5A):c.900C>G (p.Val300=) rs1414137302
NM_000335.5(SCN5A):c.934+283del rs10718761

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.