ClinVar Miner

List of variants in gene SETD2 reported as benign for not provided

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Gene type:
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Total variants: 69
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HGVS dbSNP gnomAD frequency
NM_014159.7(SETD2):c.5143-166G>A rs12631730 0.83696
NM_014159.7(SETD2):c.3465T>C (p.Asn1155=) rs6767907 0.65555
NM_014159.7(SETD2):c.7350+44C>T rs6768722 0.65313
NM_014159.7(SETD2):c.6109+230G>A rs9844122 0.65306
NM_014159.7(SETD2):c.6293+277G>A rs9845728 0.65269
NM_014159.7(SETD2):c.7432-94G>A rs2385867 0.55289
NM_014159.7(SETD2):c.5885C>T (p.Pro1962Leu) rs4082155 0.49386
NM_014159.7(SETD2):c.7098+140A>T rs13063578 0.45644
NM_014159.7(SETD2):c.5142+249C>G rs7644382 0.04583
NM_014159.7(SETD2):c.6964-283T>G rs9831464 0.04579
NM_014159.7(SETD2):c.7098+128T>C rs78188645 0.04409
NM_014159.7(SETD2):c.6109+45C>T rs79752114 0.03898
NM_014159.7(SETD2):c.3240G>A (p.Met1080Ile) rs76208147 0.02797
NM_014159.7(SETD2):c.6061-46A>G rs77252032 0.02786
NM_014159.7(SETD2):c.2704G>C (p.Glu902Gln) rs58906143 0.01669
NM_014159.7(SETD2):c.4872T>A (p.Ser1624=) rs75763513 0.01071
NM_014159.7(SETD2):c.557C>T (p.Pro186Leu) rs78759480 0.00723
NM_014159.7(SETD2):c.5271C>T (p.Leu1757=) rs144825663 0.00389
NM_014159.7(SETD2):c.2783C>G (p.Thr928Arg) rs72895708 0.00228
NM_014159.7(SETD2):c.2302G>C (p.Val768Leu) rs9311404 0.00182
NM_014159.7(SETD2):c.6173A>G (p.Asn2058Ser) rs116277395 0.00141
NM_014159.7(SETD2):c.3567C>T (p.Thr1189=) rs140803915 0.00131
NM_014159.7(SETD2):c.3229A>G (p.Thr1077Ala) rs114719990 0.00095
NM_014159.7(SETD2):c.4059C>T (p.Ser1353=) rs113560046 0.00092
NM_014159.7(SETD2):c.1775C>A (p.Thr592Lys) rs115569620 0.00088
NM_014159.7(SETD2):c.3422C>T (p.Pro1141Leu) rs142723093 0.00088
NM_014159.7(SETD2):c.4011A>G (p.Glu1337=) rs115927459 0.00078
NM_014159.7(SETD2):c.3097A>G (p.Thr1033Ala) rs145759179 0.00063
NM_014159.7(SETD2):c.1415G>A (p.Arg472His) rs201984344 0.00050
NM_014159.7(SETD2):c.1885A>G (p.Lys629Glu) rs145650484 0.00047
NM_014159.7(SETD2):c.7164C>T (p.Thr2388=) rs144752494 0.00047
NM_014159.7(SETD2):c.1734A>T (p.Leu578Phe) rs138401612 0.00038
NM_014159.7(SETD2):c.1205G>A (p.Arg402Gln) rs182736967 0.00036
NM_014159.7(SETD2):c.2251C>A (p.Pro751Thr) rs115788094 0.00034
NM_014159.7(SETD2):c.4060G>A (p.Asp1354Asn) rs138005965 0.00031
NM_014159.7(SETD2):c.5900G>A (p.Gly1967Asp) rs143991928 0.00031
NM_014159.7(SETD2):c.590C>T (p.Ala197Val) rs374950143 0.00029
NM_014159.7(SETD2):c.3484C>T (p.His1162Tyr) rs137871492 0.00028
NM_014159.7(SETD2):c.500C>T (p.Pro167Leu) rs78682369 0.00025
NM_014159.7(SETD2):c.2798G>T (p.Gly933Val) rs202209141 0.00010
NM_014159.7(SETD2):c.2155A>G (p.Asn719Asp) rs115859828 0.00005
NM_014159.7(SETD2):c.2603A>G (p.Asp868Gly) rs201752182 0.00003
NM_014159.7(SETD2):c.3426A>C (p.Glu1142Asp) rs1161942915
NM_014159.7(SETD2):c.4839+90_4839+93del rs55987628
NM_014159.7(SETD2):c.4839+91_4839+93del rs55987628
NM_014159.7(SETD2):c.4839+92_4839+93del rs55987628
NM_014159.7(SETD2):c.4839+93del rs55987628
NM_014159.7(SETD2):c.4918-78AC[16] rs61571386
NM_014159.7(SETD2):c.4918-78AC[17] rs61571386
NM_014159.7(SETD2):c.4918-78AC[19] rs61571386
NM_014159.7(SETD2):c.4918-82GC[3] rs59089794
NM_014159.7(SETD2):c.5015+39_5015+40del rs60548476
NM_014159.7(SETD2):c.5143-166_5143-164del rs202029893
NM_014159.7(SETD2):c.5143-251_5143-249dup rs61660827
NM_014159.7(SETD2):c.5143-45del rs748501527
NM_014159.7(SETD2):c.5143-55dup rs748501527
NM_014159.7(SETD2):c.5277+121GTTT[6] rs56810001
NM_014159.7(SETD2):c.5277+238_5277+239insCTC rs10662952
NM_014159.7(SETD2):c.5398-45del rs5848822
NM_014159.7(SETD2):c.5398-46_5398-45del rs5848822
NM_014159.7(SETD2):c.6061-289del rs548953692
NM_014159.7(SETD2):c.6061-314dup rs548953692
NM_014159.7(SETD2):c.6109+199C>T rs73079603
NM_014159.7(SETD2):c.6110-157_6110-156del rs72459590
NM_014159.7(SETD2):c.6110-26del rs10589946
NM_014159.7(SETD2):c.6110-27_6110-26del rs10589946
NM_014159.7(SETD2):c.6970G>T (p.Ala2324Ser) rs1162711197
NM_014159.7(SETD2):c.7351-123G>A rs10510752
NM_014159.7(SETD2):c.7431+67C>T rs2290547

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