ClinVar Miner

List of variants in gene SETX reported as benign for not provided

Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 131
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HGVS dbSNP gnomAD frequency
NM_015046.7(SETX):c.388+51C>T rs497650 0.99588
NM_015046.7(SETX):c.839-144T>C rs580964 0.90346
NM_015046.7(SETX):c.1098+208C>T rs9411448 0.89769
NM_015046.7(SETX):c.3576T>G (p.Asp1192Glu) rs1185193 0.76694
NM_015046.7(SETX):c.1077T>C (p.Tyr359=) rs9411449 0.75774
NM_015046.7(SETX):c.719-210T>G rs573913 0.69538
NM_015046.7(SETX):c.3754G>A (p.Gly1252Arg) rs1183768 0.68476
NM_015046.7(SETX):c.4156A>G (p.Ile1386Val) rs543573 0.68049
NM_015046.7(SETX):c.6547-287G>T rs10441804 0.44540
NM_015046.7(SETX):c.7759A>G (p.Ile2587Val) rs1056899 0.44536
NM_015046.7(SETX):c.6655-24G>A rs11243704 0.44367
NM_015046.7(SETX):c.389-157T>C rs514279 0.42979
NM_015046.7(SETX):c.5563A>G (p.Thr1855Ala) rs2296871 0.31596
NM_015046.7(SETX):c.5811T>C (p.Asp1937=) rs2296869 0.31585
NM_015046.7(SETX):c.5949+111A>G rs2296868 0.31582
NM_015046.7(SETX):c.5549-59C>A rs6597570 0.31568
NM_015046.7(SETX):c.5782-224G>C rs2296870 0.29779
NM_015046.7(SETX):c.5374+16C>T rs2296872 0.24325
NM_015046.7(SETX):c.5549-250G>C rs7875226 0.24281
NM_015046.7(SETX):c.5781+12dup rs3831154 0.24271
NM_015046.7(SETX):c.5549-193A>G rs6597571 0.24266
NM_015046.7(SETX):c.6654+215A>G rs3736997 0.18239
NM_015046.7(SETX):c.6842+302C>T rs13285992 0.17880
NM_015046.7(SETX):c.7199+104T>C rs7046688 0.17775
NM_015046.7(SETX):c.6936-100C>A rs2296867 0.16552
NM_015046.7(SETX):c.*562C>A rs11787894 0.16282
NM_015046.7(SETX):c.*626C>T rs11795382 0.16247
NM_015046.7(SETX):c.7100+27A>G rs2296865 0.16223
NM_015046.7(SETX):c.7100+182T>G rs17148869 0.16201
NM_015046.7(SETX):c.6654+152T>A rs3736998 0.16154
NM_015046.7(SETX):c.498+268A>G rs11790705 0.15078
NM_015046.7(SETX):c.6655-29A>G rs11243705 0.14272
NM_015046.7(SETX):c.1979C>G (p.Ala660Gly) rs882709 0.12168
NM_015046.7(SETX):c.6655-237T>C rs113154441 0.10176
NM_015046.7(SETX):c.*2262A>G rs997784 0.09345
NM_015046.7(SETX):c.6935+8T>C rs17148873 0.09319
NM_015046.7(SETX):c.6655-309A>G rs78084433 0.09258
NM_015046.7(SETX):c.389-142C>A rs13294324 0.09257
NM_015046.7(SETX):c.5949+220C>T rs58808218 0.08527
NM_015046.7(SETX):c.7834A>G (p.Ser2612Gly) rs3739927 0.08329
NM_015046.7(SETX):c.6106+258A>G rs73661156 0.07699
NM_015046.7(SETX):c.3147C>T (p.His1049=) rs3739921 0.07515
NM_015046.7(SETX):c.6546+32T>A rs2296873 0.07069
NM_015046.7(SETX):c.6546+321T>C rs2296875 0.07067
NM_015046.7(SETX):c.6546+108C>G rs2296874 0.06821
NM_015046.7(SETX):c.6936-315C>T rs77811978 0.06714
NM_015046.7(SETX):c.*1365G>T rs7875801 0.06684
NM_015046.7(SETX):c.6842+221A>G rs7025628 0.06495
NM_015046.7(SETX):c.5949+253C>T rs75403090 0.05668
NM_015046.7(SETX):c.498+30T>C rs11790312 0.05653
NM_015046.7(SETX):c.5549-172C>T rs7874311 0.05320
NM_015046.7(SETX):c.1099-73T>C rs1011378 0.05059
NM_015046.7(SETX):c.178-209T>C rs11243734 0.04747
NM_015046.7(SETX):c.7288-60A>G rs76392709 0.04746
NM_015046.7(SETX):c.3455T>G (p.Phe1152Cys) rs3739922 0.04708
NM_015046.7(SETX):c.6396+80A>G rs59825291 0.04291
NM_015046.7(SETX):c.7199+255G>A rs112275403 0.04204
NM_015046.7(SETX):c.498+20G>A rs73659013 0.02106
NM_015046.7(SETX):c.6936-27T>G rs2296866 0.02083
NM_015046.7(SETX):c.6106+14G>A rs73661157 0.01840
NM_015046.7(SETX):c.5274+46A>T rs61739429 0.01710
NM_015046.7(SETX):c.6547-164G>A rs12336849 0.01647
NM_015046.7(SETX):c.3182C>T (p.Pro1061Leu) rs12352982 0.01591
NM_015046.7(SETX):c.6324+195G>A rs115107300 0.01544
NM_015046.7(SETX):c.2975A>G (p.Lys992Arg) rs61742937 0.01445
NM_015046.7(SETX):c.6507G>A (p.Gly2169=) rs34073320 0.01300
NM_015046.7(SETX):c.1968A>G (p.Val656=) rs113997459 0.00654
NM_015046.7(SETX):c.1957C>A (p.Gln653Lys) rs116333061 0.00653
NM_015046.7(SETX):c.7905C>T (p.Ala2635=) rs112201716 0.00633
NM_015046.7(SETX):c.59G>A (p.Arg20His) rs79740039 0.00602
NM_015046.7(SETX):c.1807A>G (p.Asn603Asp) rs116205032 0.00493
NM_015046.7(SETX):c.4755T>G (p.Pro1585=) rs151237267 0.00484
NM_015046.7(SETX):c.2672T>C (p.Val891Ala) rs148181729 0.00470
NM_015046.7(SETX):c.7640T>C (p.Ile2547Thr) rs151117904 0.00431
NM_015046.7(SETX):c.3663G>C (p.Lys1221Asn) rs12344006 0.00412
NM_015046.7(SETX):c.7371T>C (p.His2457=) rs113071480 0.00399
NM_015046.7(SETX):c.3568A>G (p.Lys1190Glu) rs35473230 0.00364
NM_015046.7(SETX):c.6108A>G (p.Gly2036=) rs35815657 0.00358
NM_015046.7(SETX):c.472T>G (p.Leu158Val) rs145438764 0.00347
NM_015046.7(SETX):c.2216G>A (p.Gly739Glu) rs36024203 0.00293
NM_015046.7(SETX):c.4660T>G (p.Cys1554Gly) rs112089123 0.00250
NM_015046.7(SETX):c.2981A>G (p.Asp994Gly) rs149546633 0.00216
NM_015046.7(SETX):c.7114G>A (p.Asp2372Asn) rs150673589 0.00178
NM_015046.7(SETX):c.3310C>G (p.Gln1104Glu) rs113831637 0.00173
NM_015046.7(SETX):c.3809C>T (p.Pro1270Leu) rs144334281 0.00122
NM_015046.7(SETX):c.3010A>G (p.Asn1004Asp) rs77984885 0.00075
NM_015046.7(SETX):c.7914C>T (p.Phe2638=) rs80296256 0.00051
NM_015046.7(SETX):c.3826C>G (p.Gln1276Glu) rs148604312 0.00039
NM_015046.7(SETX):c.1693T>C (p.Phe565Leu) rs143982186 0.00037
NM_015046.7(SETX):c.4612C>T (p.Arg1538Trp) rs147018359 0.00035
NM_015046.7(SETX):c.1869A>C (p.Glu623Asp) rs139200312 0.00015
NM_015046.7(SETX):c.7100+9T>C rs200088320 0.00015
NM_015046.7(SETX):c.3968G>A (p.Arg1323Gln) rs369542231 0.00004
NM_015046.7(SETX):c.6829T>C (p.Leu2277=) rs189444354 0.00003
NM_015046.7(SETX):c.7818C>T (p.Gly2606=) rs764270386 0.00003
NM_015046.7(SETX):c.5535C>T (p.Arg1845=) rs200433173 0.00002
NM_015046.7(SETX):c.*1368G>A rs7025
NM_015046.7(SETX):c.*430dup rs1245820302
NM_015046.7(SETX):c.*431_*432del rs112251805
NM_015046.7(SETX):c.-8+134dup rs80205458
NM_015046.7(SETX):c.-8+143del rs80205458
NM_015046.7(SETX):c.-8+8dup rs66524976
NM_015046.7(SETX):c.1099-142A>G rs1536662
NM_015046.7(SETX):c.3651G>T (p.Thr1217=) rs111419285
NM_015046.7(SETX):c.389-243C>T rs74311565
NM_015046.7(SETX):c.5375-18CTT[2] rs201317659
NM_015046.7(SETX):c.5375-297_5375-286del rs200657740
NM_015046.7(SETX):c.5782-129_5782-125del rs61398915
NM_015046.7(SETX):c.6107-69T>G rs2274563
NM_015046.7(SETX):c.6324+53dup rs35545441
NM_015046.7(SETX):c.6396+221dup rs58043008
NM_015046.7(SETX):c.6396+241del rs58043008
NM_015046.7(SETX):c.6396+43del rs201395158
NM_015046.7(SETX):c.6546+92dup rs371692040
NM_015046.7(SETX):c.6842+252_6842+254del rs10615907
NM_015046.7(SETX):c.6843-16dup rs34769225
NM_015046.7(SETX):c.6843-5del rs34769225
NM_015046.7(SETX):c.7101-92_7101-91dup rs375899109
NM_015046.7(SETX):c.718+151T>G rs7036889
NM_015046.7(SETX):c.718+72_718+73del rs10573812
NM_015046.7(SETX):c.719-315_719-314dup rs58780019
NM_015046.7(SETX):c.719-315dup rs58780019
NM_015046.7(SETX):c.7199+23_7199+48dup rs367693125
NM_015046.7(SETX):c.7199+60C>T rs78827183
NM_015046.7(SETX):c.7288-197dup rs76034156
NM_015046.7(SETX):c.7288-240del rs397741391
NM_015046.7(SETX):c.7288-259_7288-258dup rs397741391
NM_015046.7(SETX):c.7288-259dup rs397741391
NM_015046.7(SETX):c.7432A>C (p.Thr2478Pro) rs142303658
NM_015046.7(SETX):c.838+333C>T rs79117874
NM_015046.7(SETX):c.839-239dup rs200362840

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