ClinVar Miner

List of variants in gene SYNGAP1 reported as benign for not provided

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Gene type:
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Total variants: 75
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HGVS dbSNP gnomAD frequency
NM_006772.3(SYNGAP1):c.762+32C>T rs453590 0.39879
NM_006772.3(SYNGAP1):c.296-160C>T rs9394145 0.23200
NM_006772.3(SYNGAP1):c.2295-168C>T rs78441724 0.09546
NM_006772.3(SYNGAP1):c.2295-91T>C rs55699469 0.09524
NM_006772.3(SYNGAP1):c.1851G>A (p.Glu617=) rs75579703 0.09434
NM_006772.3(SYNGAP1):c.2294+201T>G rs73741841 0.07869
NM_006772.3(SYNGAP1):c.1536A>G (p.Glu512=) rs7759963 0.07295
NM_006772.3(SYNGAP1):c.68-76C>T rs76557362 0.06465
NM_006772.3(SYNGAP1):c.763-265G>A rs60719642 0.05886
NM_006772.3(SYNGAP1):c.2970C>T (p.Ser990=) rs61421477 0.05793
NM_006772.3(SYNGAP1):c.68-79T>G rs1755042 0.04634
NM_006772.3(SYNGAP1):c.388-173C>A rs58922452 0.03330
NM_006772.3(SYNGAP1):c.3409-24C>T rs9969005 0.02980
NM_006772.3(SYNGAP1):c.1531+52C>T rs45520731 0.02973
NM_006772.3(SYNGAP1):c.3408+180A>T rs41270541 0.01830
NM_006772.3(SYNGAP1):c.2295-25C>T rs115441992 0.00948
NM_006772.3(SYNGAP1):c.3344T>C (p.Ile1115Thr) rs191549504 0.00927
NM_006772.3(SYNGAP1):c.84T>C (p.Ser28=) rs142359891 0.00815
NM_006772.3(SYNGAP1):c.1491T>C (p.Tyr497=) rs72887798 0.00417
NM_006772.3(SYNGAP1):c.2336+27T>C rs745374127 0.00254
NM_006772.3(SYNGAP1):c.2336+17T>C rs752795914 0.00252
NM_006772.3(SYNGAP1):c.3273A>G (p.Leu1091=) rs145707539 0.00216
NM_006772.3(SYNGAP1):c.3582+7T>C rs370618729 0.00193
NM_006772.3(SYNGAP1):c.189+29G>A rs183570634 0.00163
NM_006772.3(SYNGAP1):c.1803G>A (p.Ala601=) rs77934848 0.00134
NM_006772.3(SYNGAP1):c.3134C>G (p.Ala1045Gly) rs139759084 0.00108
NM_006772.3(SYNGAP1):c.296-8C>T rs201145910 0.00096
NM_006772.3(SYNGAP1):c.388-18T>C rs1561781809 0.00095
NM_006772.3(SYNGAP1):c.190-50G>A rs184952880 0.00092
NM_006772.3(SYNGAP1):c.1776A>G (p.Ser592=) rs150153477 0.00082
NM_006772.3(SYNGAP1):c.3297T>C (p.Tyr1099=) rs149016890 0.00082
NM_006772.3(SYNGAP1):c.586T>C (p.Leu196=) rs145694123 0.00071
NM_006772.3(SYNGAP1):c.510-50A>G rs572388344 0.00064
NM_006772.3(SYNGAP1):c.1935T>C (p.Phe645=) rs145406441 0.00059
NM_006772.3(SYNGAP1):c.3324C>T (p.Ser1108=) rs139841529 0.00059
NM_006772.3(SYNGAP1):c.1581C>T (p.Asp527=) rs202178663 0.00034
NM_006772.3(SYNGAP1):c.102C>T (p.Tyr34=) rs147913000 0.00029
NM_006772.3(SYNGAP1):c.1677-9T>C rs754389007 0.00027
NM_006772.3(SYNGAP1):c.2016G>A (p.Thr672=) rs57365292 0.00020
NM_006772.3(SYNGAP1):c.1446C>A (p.Leu482=) rs370597423 0.00016
NM_006772.3(SYNGAP1):c.1914-32A>G rs538693715 0.00016
NM_006772.3(SYNGAP1):c.2116-30A>C rs185437254 0.00016
NM_006772.3(SYNGAP1):c.1884G>A (p.Lys628=) rs140022772 0.00015
NM_006772.3(SYNGAP1):c.1914-48G>A rs139133669 0.00014
NM_006772.3(SYNGAP1):c.447A>G (p.Lys149=) rs544817923 0.00012
NM_006772.3(SYNGAP1):c.1575G>A (p.Glu525=) rs139050190 0.00011
NM_006772.3(SYNGAP1):c.3583-45G>C rs369119284 0.00009
NM_006772.3(SYNGAP1):c.2742C>T (p.Asp914=) rs534933618 0.00006
NM_006772.3(SYNGAP1):c.295+39G>T rs752202770 0.00005
NM_006772.3(SYNGAP1):c.1888A>G (p.Ile630Val) rs192497085 0.00003
NM_006772.3(SYNGAP1):c.1677-8C>T rs755438249 0.00002
NM_006772.3(SYNGAP1):c.1350A>G (p.Ala450=) rs751331097 0.00001
NM_006772.3(SYNGAP1):c.2157C>T (p.Asn719=) rs559061651 0.00001
NM_006772.3(SYNGAP1):c.1676+213dup rs57069921
NM_006772.3(SYNGAP1):c.1913+45_1913+59del rs572578854
NM_006772.3(SYNGAP1):c.1914-59TG[11] rs112678454
NM_006772.3(SYNGAP1):c.1914-59TG[14] rs112678454
NM_006772.3(SYNGAP1):c.1914-60_1914-51del rs146262788
NM_006772.3(SYNGAP1):c.198C>T (p.Pro66=) rs73402305
NM_006772.3(SYNGAP1):c.2336+23G>C rs371700905
NM_006772.3(SYNGAP1):c.2856C>T (p.Gly952=) rs535906467
NM_006772.3(SYNGAP1):c.3168_3179del (p.1053_1056SGGG[1]) rs774101585
NM_006772.3(SYNGAP1):c.3583-17G>A rs768465867
NM_006772.3(SYNGAP1):c.3794+63T>C rs3119027
NM_006772.3(SYNGAP1):c.3794+74G>T rs3119019
NM_006772.3(SYNGAP1):c.387+44C>A rs200171707
NM_006772.3(SYNGAP1):c.388-27C>A rs1561781788
NM_006772.3(SYNGAP1):c.3963A>C (p.Pro1321=) rs764754365
NM_006772.3(SYNGAP1):c.3983G>C (p.Arg1328Pro) rs767447413
NM_006772.3(SYNGAP1):c.510-205_510-199dup rs373773732
NM_006772.3(SYNGAP1):c.510-45T>G rs750491221
NM_006772.3(SYNGAP1):c.510-49del rs371293417
NM_006772.3(SYNGAP1):c.510-53dup rs28381596
NM_006772.3(SYNGAP1):c.510-54_510-53dup rs28381596
NM_006772.3(SYNGAP1):c.708G>A (p.Ala236=) rs745547755

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