ClinVar Miner

List of variants in gene CNTN1 reported as likely benign by GeneDx

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Gene type:
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Total variants: 61
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HGVS dbSNP gnomAD frequency
NM_001843.4(CNTN1):c.1229-92C>T rs35617364 0.03524
NM_001843.4(CNTN1):c.1229-85G>A rs34601389 0.03462
NM_001843.4(CNTN1):c.497-112C>T rs71449788 0.03411
NM_001843.4(CNTN1):c.2823+244G>A rs55639255 0.03287
NM_001843.4(CNTN1):c.61+79A>C rs35684552 0.03260
NM_001843.4(CNTN1):c.-76-325T>G rs12821990 0.03258
NM_001843.4(CNTN1):c.1229-204T>C rs12828796 0.03223
NM_001843.4(CNTN1):c.1380-326G>A rs80155908 0.02801
NM_001843.4(CNTN1):c.2185-344G>C rs61924397 0.02539
NM_001843.4(CNTN1):c.2710+296A>G rs34016463 0.02520
NM_001843.4(CNTN1):c.1380-149C>T rs139915282 0.01599
NM_001843.4(CNTN1):c.496+181G>A rs57625854 0.01559
NM_001843.4(CNTN1):c.*210A>G rs17129022 0.01402
NM_001843.4(CNTN1):c.61+74G>A rs78150049 0.01377
NM_001843.4(CNTN1):c.1963+96A>G rs140464654 0.01360
NM_001843.4(CNTN1):c.2184+217G>A rs114746486 0.01110
NM_001843.4(CNTN1):c.497-267C>G rs146293518 0.01034
NM_001843.4(CNTN1):c.2823+58A>G rs73126915 0.00995
NM_001843.4(CNTN1):c.61+56G>A rs77033666 0.00969
NM_001843.4(CNTN1):c.62-189C>T rs114816947 0.00968
NM_001843.4(CNTN1):c.227+69C>T rs144175278 0.00791
NM_001843.4(CNTN1):c.2523+257C>T rs186427938 0.00781
NM_001843.4(CNTN1):c.400+287G>C rs150587172 0.00764
NM_001843.4(CNTN1):c.2823+56C>G rs278908 0.00739
NM_001843.4(CNTN1):c.1229-113G>A rs149676914 0.00462
NM_001843.4(CNTN1):c.2524-162T>G rs112047373 0.00422
NM_001843.4(CNTN1):c.2823+184T>C rs189519111 0.00422
NM_001843.4(CNTN1):c.2823+189A>T rs144590249 0.00421
NM_001843.4(CNTN1):c.1111-202G>A rs146501111 0.00406
NM_001843.4(CNTN1):c.2523+51C>T rs188219983 0.00368
NM_001843.4(CNTN1):c.1804+321T>A rs147996272 0.00350
NM_001843.4(CNTN1):c.1228+249T>C rs112835012 0.00335
NM_001843.4(CNTN1):c.497-17G>T rs142799954 0.00276
NM_001843.4(CNTN1):c.1401T>C (p.Gly467=) rs61759480 0.00215
NM_001843.4(CNTN1):c.1251G>T (p.Met417Ile) rs145510600 0.00213
NM_001843.4(CNTN1):c.1911C>T (p.Tyr637=) rs61759481 0.00138
NM_001843.4(CNTN1):c.2598C>G (p.Ala866=) rs140462332 0.00120
NM_001843.4(CNTN1):c.804-8A>G rs56172264 0.00106
NM_001843.4(CNTN1):c.400+13T>C rs201396853 0.00105
NM_001843.4(CNTN1):c.1507+19G>T rs145594554 0.00099
NM_001843.4(CNTN1):c.2523+4C>T rs74076940 0.00091
NM_001843.4(CNTN1):c.2823+5A>G rs148453314 0.00078
NM_001843.4(CNTN1):c.873T>A (p.Ser291=) rs200022020 0.00047
NM_001843.4(CNTN1):c.147T>C (p.Asn49=) rs61754100 0.00035
NM_001843.4(CNTN1):c.2114-20T>C rs896908779 0.00004
NM_001843.4(CNTN1):c.882T>C (p.Val294=) rs760650497 0.00002
NM_001843.4(CNTN1):c.855T>C (p.Thr285=) rs775839275 0.00001
NM_001843.4(CNTN1):c.1563C>T (p.Asn521=) rs201595623
NM_001843.4(CNTN1):c.2100A>G (p.Lys700=) rs1555195505
NM_001843.4(CNTN1):c.2113+294del rs576562218
NM_001843.4(CNTN1):c.2113+309_2113+312del rs533822715
NM_001843.4(CNTN1):c.2114-17T>G rs1555199184
NM_001843.4(CNTN1):c.2178A>G (p.Thr726=) rs1291165164
NM_001843.4(CNTN1):c.2185-11T>C rs1555199578
NM_001843.4(CNTN1):c.2420-328del rs146697946
NM_001843.4(CNTN1):c.2694T>C (p.Ala898=) rs1555200914
NM_001843.4(CNTN1):c.342T>C (p.Cys114=) rs1555180947
NM_001843.4(CNTN1):c.401-14del rs148387796
NM_001843.4(CNTN1):c.496+230AT[21] rs138237336
NM_001843.4(CNTN1):c.985+20T>A rs1057523160
NM_001843.4(CNTN1):c.985+211G>C rs147325714

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