List of variants in gene CTNS reported as benign by GeneDx

Minimum submission review status:		Collection method:
Minimum conflict level: Report conflict between different conditions
Gene type: Distinguish antisense genes from sense genes
Show significances as they were submitted (without aggregation into standard terms)
		ClinVar version:

Total variants: 36

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HGVS	dbSNP	gnomAD frequency
NM_004937.3(CTNS):c.329+22C>G	rs459613	0.88549
NM_004937.3(CTNS):c.779C>T (p.Thr260Ile)	rs161400	0.84806
NM_004937.3(CTNS):c.852+242C>G	rs466867	0.58947
NM_004937.3(CTNS):c.461+52G>A	rs467277	0.51389
NM_004937.3(CTNS):c.-19-211A>G	rs456253	0.43126
NM_004937.3(CTNS):c.461+49A>G	rs457419	0.35954
NM_004937.3(CTNS):c.141-103G>A	rs222778	0.35912
NM_004937.3(CTNS):c.970+70C>T	rs222753	0.34692
NM_004937.3(CTNS):c.*405G>A	rs760273	0.21386
NM_004937.3(CTNS):c.*555T>C	rs1048646	0.19518
NM_004937.3(CTNS):c.*572A>G	rs3826493	0.19518
NM_004937.3(CTNS):c.*627T>C	rs1048647	0.19492
NM_004937.3(CTNS):c.*631T>C	rs1048648	0.19488
NM_004937.3(CTNS):c.*300C>G	rs2873624	0.19455
NM_004937.3(CTNS):c.*421T>C	rs760274	0.19404
NM_004937.3(CTNS):c.*410A>G	rs3826496	0.19387
NM_004937.3(CTNS):c.681+274G>A	rs4790532	0.15427
NM_004937.3(CTNS):c.461+54G>A	rs12938401	0.15247
NM_004937.3(CTNS):c.504G>A (p.Thr168=)	rs1800528	0.14800
NM_004937.3(CTNS):c.852+281T>C	rs12325801	0.14096
NM_004937.3(CTNS):c.970+45C>T	rs11868420	0.10969
NM_004937.3(CTNS):c.*527G>A	rs79668190	0.06278
NM_004937.3(CTNS):c.461+317C>A	rs9907296	0.06024
NM_004937.3(CTNS):c.-634C>T	rs138913261	0.05988
NC_000017.11:g.3636333A>T	rs111541274	0.05900
NM_004937.3(CTNS):c.462T>C (p.Ser154=)	rs77453839	0.05257
NM_004937.3(CTNS):c.62-224C>T	rs80308477	0.04921
NM_004937.3(CTNS):c.852+228G>A	rs9900963	0.04194
NM_004937.3(CTNS):c.970+15G>A	rs76153698	0.03340
NM_004937.3(CTNS):c.124G>A (p.Val42Ile)	rs35086888	0.01867
NM_004937.3(CTNS):c.-635G>C	rs112140949	0.01378
NC_000017.11:g.3636287G>T	rs77838064
NM_004937.3(CTNS):c.225+147G>C	rs161351
NM_004937.3(CTNS):c.226-301dup	rs560988939
NM_004937.3(CTNS):c.852+243A>G	rs465221
NM_004937.3(CTNS):c.852+259C>G	rs12325922

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