Variants in gene GALNT12

Minimum submission review status:		Collection method:
Minimum conflict level: Report conflict between different conditions
Gene type: Distinguish antisense genes from sense genes
Show significances as they were submitted (without aggregation into standard terms)
		ClinVar version:

If a variant has more than one submission, it may be counted in more than one significance column. If this is the case, the total number of variants will be less than the sum of the other cells.

pathogenic	likely pathogenic	uncertain significance	likely benign	benign	risk factor	not provided	total
0	2	854	382	61	3	1	1234

Condition and significance breakdown #

Total conditions: 10

Download table as spreadsheet

Condition	likely pathogenic	uncertain significance	likely benign	benign	risk factor	not provided	total
Hereditary cancer-predisposing syndrome	0	695	297	7	0	0	998
not provided	2	396	199	58	0	0	620
Colorectal cancer, susceptibility to, 1	0	108	1	0	3	0	112
GALNT12-related condition	0	6	19	5	0	0	30
not specified	0	2	2	13	0	0	17
Inborn genetic diseases	0	4	0	0	0	0	4
Adenomatous polyposis coli, attenuated	0	0	0	1	0	0	1
Breast neoplasm	0	0	1	0	0	0	1
Colorectal cancer	0	1	0	0	0	0	1
Familial colorectal cancer	0	0	0	0	0	1	1

Submitter and significance breakdown #

Total submitters: 16

Download table as spreadsheet

Submitter	likely pathogenic	uncertain significance	likely benign	benign	risk factor	not provided	total
Ambry Genetics	0	698	295	7	0	0	1000
Invitae	0	384	175	22	0	0	581
Baylor Genetics	0	102	0	0	0	0	102
Quest Diagnostics Nichols Institute San Juan Capistrano	1	32	25	26	0	0	84
GeneDx	0	0	14	28	0	0	42
PreventionGenetics, part of Exact Sciences	0	6	19	5	0	0	30
Institute for Clinical Genetics, University Hospital TU Dresden, University Hospital TU Dresden	1	9	0	1	0	0	11
Fulgent Genetics, Fulgent Genetics	0	7	1	0	0	0	8
OMIM	0	0	0	0	3	0	3
University of Washington Department of Laboratory Medicine, University of Washington	0	1	2	0	0	0	3
Genetic Services Laboratory, University of Chicago	0	0	1	1	0	0	2
CSER _CC_NCGL, University of Washington	0	1	0	0	0	0	1
Department of Pathology and Laboratory Medicine, Sinai Health System	0	0	1	0	0	0	1
GenomeConnect, ClinGen	0	0	0	0	0	1	1
Molecular Oncology Laboratory, Hospital Clínico San Carlos	0	0	0	1	0	0	1
ACT Genomics,	0	0	1	0	0	0	1

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.