ClinVar Miner

List of variants in gene HNF1A reported as likely benign

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Gene type:
ClinVar version:
Total variants: 241
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HGVS dbSNP gnomAD frequency
NM_000545.8(HNF1A):c.51C>G (p.Leu17=) rs1169289 0.42543
NM_000545.8(HNF1A):c.79A>C (p.Ile27Leu) rs1169288 0.35489
NM_000545.8(HNF1A):c.1501+7G>A rs2464195 0.30441
NM_000545.8(HNF1A):c.1460G>A (p.Ser487Asn) rs2464196 0.26206
NM_000545.8(HNF1A):c.1375C>T (p.Leu459=) rs2259820 0.26141
NM_000545.8(HNF1A):c.1545G>A (p.Thr515=) rs55834942 0.13864
NM_000545.8(HNF1A):c.1501+68A>G rs55919842 0.02520
NM_000545.8(HNF1A):c.293C>T (p.Ala98Val) rs1800574 0.02065
NM_000545.8(HNF1A):c.1720= (p.Ser574=) rs1169305 0.01390
NM_000545.8(HNF1A):c.526+53C>G rs56224955 0.01241
NM_000545.8(HNF1A):c.326+241T>C rs575098936 0.00832
NM_000545.8(HNF1A):c.1309+26C>T rs56016526 0.00778
NM_000545.8(HNF1A):c.1309+52C>T rs56031130 0.00583
NM_000545.8(HNF1A):c.326+6_326+10dup rs56158114 0.00415
NM_000545.8(HNF1A):c.1502-147A>G rs570317403 0.00325
NM_000545.8(HNF1A):c.276C>T (p.Leu92=) rs34056805 0.00269
NM_000545.8(HNF1A):c.1425G>A (p.Pro475=) rs145589373 0.00232
NM_000545.5(HNF1A):c.-347G>A rs76729898 0.00231
NM_000545.8(HNF1A):c.252C>T (p.Pro84=) rs78772552 0.00215
NM_000545.5(HNF1A):c.-400C>T rs77774709 0.00200
NM_000545.8(HNF1A):c.1165T>G (p.Leu389Val) rs115080759 0.00198
NM_000545.8(HNF1A):c.1446C>T (p.Ser482=) rs147366495 0.00117
NM_000545.6(HNF1A):c.-527C>T rs3809315 0.00115
NM_000545.8(HNF1A):c.-29G>A rs376961226 0.00108
NM_000545.8(HNF1A):c.1704C>T (p.Pro568=) rs148520816 0.00103
NM_000545.8(HNF1A):c.1722C>A (p.Ser574Arg) rs141304623 0.00103
NM_000545.8(HNF1A):c.156C>T (p.Gly52=) rs150195625 0.00086
NM_000545.8(HNF1A):c.155G>C (p.Gly52Ala) rs142318174 0.00083
NM_000545.8(HNF1A):c.1107+9C>G rs17847497 0.00081
NM_000545.8(HNF1A):c.1323G>A (p.Thr441=) rs138996307 0.00081
NM_000545.8(HNF1A):c.92G>A (p.Gly31Asp) rs137853247 0.00076
NM_000545.8(HNF1A):c.-89T>C rs767550584 0.00074
NM_000545.8(HNF1A):c.1748G>A (p.Arg583Gln) rs137853242 0.00060
NM_000545.8(HNF1A):c.1309+187T>A rs184963118 0.00044
NM_000545.8(HNF1A):c.965A>G (p.Tyr322Cys) rs140491072 0.00041
NM_000545.8(HNF1A):c.1539C>T (p.Thr513=) rs193922584 0.00037
NM_000545.8(HNF1A):c.336G>A (p.Pro112=) rs371365341 0.00036
NM_000545.8(HNF1A):c.1501+6C>T rs374306837 0.00035
NM_000545.8(HNF1A):c.586A>G (p.Thr196Ala) rs139712739 0.00024
NM_000545.8(HNF1A):c.1386C>T (p.Val462=) rs143015301 0.00021
NM_000545.8(HNF1A):c.1108-4G>A rs372892932 0.00020
NM_000545.8(HNF1A):c.1377G>A (p.Leu459=) rs118028009 0.00020
NM_000545.8(HNF1A):c.1309+102A>T rs113111047 0.00018
NM_000545.8(HNF1A):c.1500C>T (p.His500=) rs201694197 0.00017
NM_000545.8(HNF1A):c.1756G>A (p.Ala586Thr) rs373857078 0.00017
NM_000545.8(HNF1A):c.693G>A (p.Thr231=) rs145240086 0.00017
NM_000545.8(HNF1A):c.716C>T (p.Ala239Val) rs587778397 0.00016
NM_000545.8(HNF1A):c.-96T>G rs576862555 0.00013
NM_000545.8(HNF1A):c.521C>T (p.Ala174Val) rs201934320 0.00013
NM_000545.8(HNF1A):c.1272T>C (p.Pro424=) rs141324437 0.00011
NM_000545.8(HNF1A):c.1624-19G>A rs193922586 0.00011
NM_000545.8(HNF1A):c.1501+65G>C rs371088791 0.00010
NM_000545.8(HNF1A):c.142G>A (p.Glu48Lys) rs772222326 0.00009
NM_000545.8(HNF1A):c.225C>T (p.Asp75=) rs202180554 0.00009
NM_000545.8(HNF1A):c.1593C>T (p.Ser531=) rs370300688 0.00008
NM_000545.8(HNF1A):c.-181G>A rs980850048 0.00007
NM_000545.8(HNF1A):c.1674G>A (p.Pro558=) rs780280661 0.00007
NM_000545.8(HNF1A):c.42G>A (p.Ala14=) rs775391034 0.00007
NM_000545.8(HNF1A):c.542G>C (p.Gly181Ala) rs773315874 0.00007
NM_000545.8(HNF1A):c.1011C>T (p.Ser337=) rs549471872 0.00006
NM_000545.8(HNF1A):c.1071G>A (p.Glu357=) rs376279459 0.00006
NM_000545.8(HNF1A):c.1405C>T (p.His469Tyr) rs201811844 0.00006
NM_000545.8(HNF1A):c.1729C>G (p.His577Asp) rs376832928 0.00006
NM_000545.8(HNF1A):c.871C>T (p.Pro291Ser) rs151256267 0.00006
NM_000545.8(HNF1A):c.954C>T (p.His318=) rs193922607 0.00006
NM_000545.8(HNF1A):c.99G>A (p.Pro33=) rs538619966 0.00006
NM_000545.8(HNF1A):c.480C>T (p.Ala160=) rs368536974 0.00005
NM_000545.8(HNF1A):c.1015G>A (p.Gly339Ser) rs766790596 0.00004
NM_000545.8(HNF1A):c.1310-12C>T rs193922579 0.00004
NM_000545.8(HNF1A):c.1383C>T (p.Pro461=) rs772756175 0.00004
NM_000545.8(HNF1A):c.1502-14T>C rs765596650 0.00004
NM_000545.8(HNF1A):c.150C>T (p.Cys50=) rs193922583 0.00004
NM_000545.8(HNF1A):c.1624-15G>A rs193922585 0.00004
NM_000545.8(HNF1A):c.527-18G>A rs375259151 0.00004
NM_000545.8(HNF1A):c.713+13G>A rs755961371 0.00004
NM_000545.8(HNF1A):c.713+8G>A rs1202882892 0.00004
NM_000545.8(HNF1A):c.-6C>T rs779387337 0.00003
NM_000545.8(HNF1A):c.1522G>A (p.Glu508Lys) rs483353044 0.00003
NM_000545.8(HNF1A):c.30G>A (p.Thr10=) rs746020457 0.00003
NM_000545.8(HNF1A):c.900C>T (p.Pro300=) rs762555237 0.00003
NM_000545.8(HNF1A):c.1745A>G (p.His582Arg) rs193922589 0.00002
NM_000545.8(HNF1A):c.216C>T (p.Asp72=) rs148961412 0.00002
NM_000545.8(HNF1A):c.264G>A (p.Glu88=) rs201223431 0.00002
NM_000545.8(HNF1A):c.978G>A (p.Ala326=) rs200351196 0.00002
NM_000545.8(HNF1A):c.-4A>G rs561269721 0.00001
NM_000545.8(HNF1A):c.1108-15G>A rs1395103510 0.00001
NM_000545.8(HNF1A):c.1108-6del rs1439874755 0.00001
NM_000545.8(HNF1A):c.1170G>A (p.Glu390=) rs761882013 0.00001
NM_000545.8(HNF1A):c.1281C>T (p.Thr427=) rs1345001140 0.00001
NM_000545.8(HNF1A):c.1521C>A (p.Pro507=) rs977750039 0.00001
NM_000545.8(HNF1A):c.153C>T (p.Gly51=) rs761779651 0.00001
NM_000545.8(HNF1A):c.1623+20G>A rs1012229716 0.00001
NM_000545.8(HNF1A):c.1663C>T (p.Leu555Phe) rs193922587 0.00001
NM_000545.8(HNF1A):c.1695C>T (p.Leu565=) rs762669462 0.00001
NM_000545.8(HNF1A):c.246G>A (p.Thr82=) rs752243228 0.00001
NM_000545.8(HNF1A):c.326+18G>A rs1166992434 0.00001
NM_000545.8(HNF1A):c.537T>C (p.His179=) rs765329757 0.00001
NM_000545.8(HNF1A):c.681G>A (p.Glu227=) rs780613374 0.00001
NM_000545.8(HNF1A):c.685C>A (p.Arg229=) rs769086289 0.00001
NM_000545.8(HNF1A):c.713+14C>T rs193922601 0.00001
NM_000545.8(HNF1A):c.759G>T (p.Gly253=) rs749946974 0.00001
NM_000545.8(HNF1A):c.766T>A (p.Ser256Thr) rs781711191 0.00001
NM_000545.8(HNF1A):c.780G>A (p.Thr260=) rs749633685 0.00001
NM_000545.8(HNF1A):c.867C>G (p.Pro289=) rs907312892 0.00001
NM_000545.8(HNF1A):c.894G>A (p.Ala298=) rs951696015 0.00001
NM_000545.8(HNF1A):c.-123G>A
NM_000545.8(HNF1A):c.-124G>C rs563304627
NM_000545.8(HNF1A):c.-167TGGGGGT[3] rs538476099
NM_000545.8(HNF1A):c.1014C>T (p.Gly338=)
NM_000545.8(HNF1A):c.1062G>T (p.Thr354=)
NM_000545.8(HNF1A):c.1107+14C>T
NM_000545.8(HNF1A):c.1107+15T>C
NM_000545.8(HNF1A):c.1107+17G>C
NM_000545.8(HNF1A):c.1107+6T>C
NM_000545.8(HNF1A):c.1113A>G (p.Ser371=)
NM_000545.8(HNF1A):c.1135C>G (p.Pro379Ala) rs754729248
NM_000545.8(HNF1A):c.1156C>T (p.Leu386=)
NM_000545.8(HNF1A):c.1230G>A (p.Gly410=)
NM_000545.8(HNF1A):c.1242C>T (p.Ile414=)
NM_000545.8(HNF1A):c.126C>G (p.Gly42=)
NM_000545.8(HNF1A):c.126C>T (p.Gly42=)
NM_000545.8(HNF1A):c.1275G>A (p.Thr425=)
NM_000545.8(HNF1A):c.1302G>C (p.Leu434=)
NM_000545.8(HNF1A):c.1308C>T (p.Ile436=)
NM_000545.8(HNF1A):c.1309+16T>C
NM_000545.8(HNF1A):c.1309+19G>A
NM_000545.8(HNF1A):c.1309+20T>G
NM_000545.8(HNF1A):c.1310-8C>T rs913705079
NM_000545.8(HNF1A):c.132G>A (p.Leu44=)
NM_000545.8(HNF1A):c.1335T>C (p.Ser445=)
NM_000545.8(HNF1A):c.1341G>A (p.Pro447=)
NM_000545.8(HNF1A):c.1380_1406del (p.Gln460_Leu468del) rs544842497
NM_000545.8(HNF1A):c.1383C>A (p.Pro461=) rs772756175
NM_000545.8(HNF1A):c.1395C>T (p.Ser465=)
NM_000545.8(HNF1A):c.13C>T (p.Leu5=)
NM_000545.8(HNF1A):c.1401G>A (p.Pro467=)
NM_000545.8(HNF1A):c.1407C>T (p.His469=)
NM_000545.8(HNF1A):c.1424C>T (p.Pro475Leu) rs193922580
NM_000545.8(HNF1A):c.1455C>G (p.Thr485=)
NM_000545.8(HNF1A):c.1455C>T (p.Thr485=)
NM_000545.8(HNF1A):c.1464C>G (p.Pro488=) rs765827203
NM_000545.8(HNF1A):c.1464C>T (p.Pro488=)
NM_000545.8(HNF1A):c.1486C>T (p.Leu496=)
NM_000545.8(HNF1A):c.1497C>A (p.Pro499=)
NM_000545.8(HNF1A):c.1501+15C>T
NM_000545.8(HNF1A):c.1501+16C>T
NM_000545.8(HNF1A):c.1501+7G>C rs2464195
NM_000545.8(HNF1A):c.1502-19CT[2] rs753496283
NM_000545.8(HNF1A):c.1502-8G>T
NM_000545.8(HNF1A):c.152G>A (p.Gly51Asp) rs776710848
NM_000545.8(HNF1A):c.1544C>A (p.Thr515Lys) rs745460046
NM_000545.8(HNF1A):c.1548C>T (p.Gly516=) rs886038346
NM_000545.8(HNF1A):c.155_156delinsCT (p.Gly52Ala) rs587778393
NM_000545.8(HNF1A):c.1560G>A (p.Gln520=) rs1877296271
NM_000545.8(HNF1A):c.1569C>A (p.Leu523=)
NM_000545.8(HNF1A):c.1569C>T (p.Leu523=)
NM_000545.8(HNF1A):c.1575C>T (p.Thr525=)
NM_000545.8(HNF1A):c.1584C>T (p.Thr528=)
NM_000545.8(HNF1A):c.1602C>T (p.Ala534=)
NM_000545.8(HNF1A):c.1611G>A (p.Thr537=)
NM_000545.8(HNF1A):c.1623+11G>A
NM_000545.8(HNF1A):c.1623+16G>A rs1555212572
NM_000545.8(HNF1A):c.1623+3A>G rs886038347
NM_000545.8(HNF1A):c.1624-39C>G
NM_000545.8(HNF1A):c.1624-6C>T
NM_000545.8(HNF1A):c.1624-7C>T
NM_000545.8(HNF1A):c.1638C>T (p.Asp546=)
NM_000545.8(HNF1A):c.1671G>A (p.Thr557=)
NM_000545.8(HNF1A):c.1680T>G (p.Ser560=)
NM_000545.8(HNF1A):c.1689C>G (p.Thr563=)
NM_000545.8(HNF1A):c.1698C>T (p.His566=)
NM_000545.8(HNF1A):c.1713C>T (p.Asp571=)
NM_000545.8(HNF1A):c.1719C>T (p.Ala573=)
NM_000545.8(HNF1A):c.1719_1720inv (p.Ser574Gly)
NM_000545.8(HNF1A):c.1728G>A (p.Gln576=)
NM_000545.8(HNF1A):c.1740G>A (p.Pro580=)
NM_000545.8(HNF1A):c.1743C>G (p.Ala581=)
NM_000545.8(HNF1A):c.1743C>T (p.Ala581=)
NM_000545.8(HNF1A):c.1747C>A (p.Arg583=)
NM_000545.8(HNF1A):c.1749G>C (p.Arg583=)
NM_000545.8(HNF1A):c.1761C>T (p.Ser587=) rs2135851686
NM_000545.8(HNF1A):c.1768+20C>G
NM_000545.8(HNF1A):c.204G>A (p.Arg68=)
NM_000545.8(HNF1A):c.222G>A (p.Thr74=)
NM_000545.8(HNF1A):c.261A>G (p.Lys87=)
NM_000545.8(HNF1A):c.291G>A (p.Ala97=)
NM_000545.8(HNF1A):c.306C>T (p.Ala102=) rs1486966222
NM_000545.8(HNF1A):c.30G>T (p.Thr10=) rs746020457
NM_000545.8(HNF1A):c.326+17C>T
NM_000545.8(HNF1A):c.327-18G>A
NM_000545.8(HNF1A):c.327-19C>T
NM_000545.8(HNF1A):c.348G>A (p.Ala116=)
NM_000545.8(HNF1A):c.408C>G (p.Thr136=)
NM_000545.8(HNF1A):c.417C>T (p.Leu139=)
NM_000545.8(HNF1A):c.420C>T (p.Asn140=)
NM_000545.8(HNF1A):c.492C>G (p.Thr164=)
NM_000545.8(HNF1A):c.498C>T (p.Tyr166=) rs1876675633
NM_000545.8(HNF1A):c.519G>A (p.Val173=) rs534301078
NM_000545.8(HNF1A):c.51C>T (p.Leu17=)
NM_000545.8(HNF1A):c.522G>A (p.Ala174=)
NM_000545.8(HNF1A):c.526+13C>T
NM_000545.8(HNF1A):c.527-6_527-3del
NM_000545.8(HNF1A):c.588C>G (p.Thr196=)
NM_000545.8(HNF1A):c.639C>A (p.Ile213=) rs768753432
NM_000545.8(HNF1A):c.63G>T (p.Leu21=)
NM_000545.8(HNF1A):c.676_678del (p.Lys226del) rs1555211927
NM_000545.8(HNF1A):c.680_683delinsTCCTCCACTT (p.Glu227_Glu228delinsValLeuHisLeu) rs1876937295
NM_000545.8(HNF1A):c.693G>T (p.Thr231=)
NM_000545.8(HNF1A):c.703G>C (p.Glu235Gln) rs1353807357
NM_000545.8(HNF1A):c.705G>A (p.Glu235=)
NM_000545.8(HNF1A):c.708C>T (p.Cys236=)
NM_000545.8(HNF1A):c.711T>C (p.Asn237=)
NM_000545.8(HNF1A):c.713+10C>T
NM_000545.8(HNF1A):c.713+11G>A
NM_000545.8(HNF1A):c.713+15G>A
NM_000545.8(HNF1A):c.713+7C>T
NM_000545.8(HNF1A):c.713+9G>T
NM_000545.8(HNF1A):c.717G>A (p.Ala239=)
NM_000545.8(HNF1A):c.750G>A (p.Gln250=)
NM_000545.8(HNF1A):c.765C>G (p.Gly255=) rs757910486
NM_000545.8(HNF1A):c.801_802insGGG (p.Trp267_Phe268insGly) rs1555212009
NM_000545.8(HNF1A):c.837C>T (p.His279=)
NM_000545.8(HNF1A):c.840G>A (p.Lys280=) rs1876974758
NM_000545.8(HNF1A):c.841C>T (p.Leu281=)
NM_000545.8(HNF1A):c.843G>C (p.Leu281=)
NM_000545.8(HNF1A):c.852C>T (p.Asp284=)
NM_000545.8(HNF1A):c.855G>A (p.Thr285=)
NM_000545.8(HNF1A):c.861C>T (p.Ser287=)
NM_000545.8(HNF1A):c.862G>T (p.Gly288Trp) rs539507291
NM_000545.8(HNF1A):c.867C>A (p.Pro289=)
NM_000545.8(HNF1A):c.870C>A (p.Pro290=) rs779008957
NM_000545.8(HNF1A):c.870C>G (p.Pro290=)
NM_000545.8(HNF1A):c.870C>T (p.Pro290=) rs779008957
NM_000545.8(HNF1A):c.872C>A (p.Pro291Gln) rs193922606
NM_000545.8(HNF1A):c.879A>T (p.Pro293=)
NM_000545.8(HNF1A):c.87A>G (p.Ala29=)
NM_000545.8(HNF1A):c.885G>A (p.Pro295=)
NM_000545.8(HNF1A):c.956-4C>T
NM_000545.8(HNF1A):c.956-8C>T rs762339992
NM_000545.8(HNF1A):c.969A>G (p.Gly323=)
NM_000545.8(HNF1A):c.977C>T (p.Ala326Val) rs369764257

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