List of variants in gene KCNT1 reported as likely benign by PreventionGenetics, part of Exact Sciences

Minimum submission review status:		Collection method:
Minimum conflict level: Report conflict between different conditions
Gene type: Distinguish antisense genes from sense genes
Show significances as they were submitted (without aggregation into standard terms)
		ClinVar version:

Total variants: 42

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HGVS	dbSNP	gnomAD frequency
NM_020822.3(KCNT1):c.99A>G (p.Gln33=)	rs146152956	0.00323
NM_020822.3(KCNT1):c.2543A>G (p.Glu848Gly)	rs149804567	0.00233
NM_020822.3(KCNT1):c.2729G>A (p.Arg910Gln)	rs151272083	0.00162
NM_020822.3(KCNT1):c.3641G>A (p.Arg1214Gln)	rs138282349	0.00128
NM_020822.3(KCNT1):c.985C>T (p.Leu329=)	rs147165522	0.00093
NM_020822.3(KCNT1):c.1134C>T (p.Val378=)	rs149960236	0.00088
NM_020822.3(KCNT1):c.942C>T (p.Thr314=)	rs144766991	0.00075
NM_020822.3(KCNT1):c.3685A>G (p.Thr1229Ala)	rs74533482	0.00057
NM_020822.3(KCNT1):c.1726G>A (p.Glu576Lys)	rs147306623	0.00048
NM_020822.3(KCNT1):c.3682G>A (p.Glu1228Lys)	rs144679713	0.00047
NM_020822.3(KCNT1):c.3340C>T (p.Arg1114Trp)	rs370085077	0.00037
NM_020822.3(KCNT1):c.885G>A (p.Ala295=)	rs142756900	0.00036
NM_020822.3(KCNT1):c.522G>A (p.Met174Ile)	rs147551342	0.00035
NM_020822.3(KCNT1):c.334+10G>A	rs185209587	0.00029
NM_020822.3(KCNT1):c.1104G>A (p.Ala368=)	rs146032445	0.00027
NM_020822.3(KCNT1):c.1638G>A (p.Pro546=)	rs138352399	0.00025
NM_020822.3(KCNT1):c.3694G>A (p.Glu1232Lys)	rs138109494	0.00023
NM_020822.3(KCNT1):c.2236G>A (p.Val746Met)	rs559344618	0.00021
NM_020822.3(KCNT1):c.2220C>G (p.Asp740Glu)	rs148162797	0.00016
NM_020822.3(KCNT1):c.1394C>T (p.Thr465Met)	rs539139475	0.00014
NM_020822.3(KCNT1):c.3058C>T (p.Arg1020Cys)	rs747605326	0.00014
NM_020822.3(KCNT1):c.3317G>A (p.Arg1106Gln)	rs561255614	0.00014
NM_020822.3(KCNT1):c.1152C>T (p.Asp384=)	rs763854215	0.00011
NM_020822.3(KCNT1):c.1327A>T (p.Met443Leu)	rs201908490	0.00006
NM_020822.3(KCNT1):c.1626A>G (p.Gly542=)	rs537431085	0.00006
NM_020822.3(KCNT1):c.1962C>T (p.His654=)	rs141759469	0.00006
NM_020822.3(KCNT1):c.3015G>T (p.Gly1005=)	rs368875875	0.00006
NM_020822.3(KCNT1):c.533C>T (p.Ala178Val)	rs141961737	0.00006
NM_020822.3(KCNT1):c.3437G>A (p.Arg1146His)	rs368339692	0.00005
NM_020822.3(KCNT1):c.1614C>T (p.Arg538=)	rs368876173	0.00004
NM_020822.3(KCNT1):c.2594+7C>T	rs545094921	0.00004
NM_020822.3(KCNT1):c.1188C>T (p.His396=)	rs544796091	0.00003
NM_020822.3(KCNT1):c.1395G>A (p.Thr465=)	rs777870376	0.00003
NM_020822.3(KCNT1):c.2712C>T (p.Asn904=)	rs554237279	0.00002
NM_020822.3(KCNT1):c.852G>A (p.Thr284=)	rs773023899	0.00002
NM_020822.3(KCNT1):c.1380C>T (p.Asn460=)	rs566700584	0.00001
NM_020822.3(KCNT1):c.222G>T (p.Leu74=)	rs573574312	0.00001
NM_020822.3(KCNT1):c.3664C>T (p.Leu1222=)	rs755694160	0.00001
NM_020822.3(KCNT1):c.1769+8C>A	rs371287985
NM_020822.3(KCNT1):c.2944-52CTCC[7]	rs55843930
NM_020822.3(KCNT1):c.3178-26GCCCT[6]	rs757968008
NM_020822.3(KCNT1):c.3502+8C>T

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