ClinVar Miner

List of variants in gene LAMP2 reported as likely benign by GeneDx

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Total variants: 61
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HGVS dbSNP gnomAD frequency
NM_002294.3(LAMP2):c.1094-140A>G rs141348126 0.01356
NM_002294.3(LAMP2):c.929-126G>A rs7888393 0.01266
NM_002294.3(LAMP2):c.*3249T>C rs41300908 0.01188
NM_002294.3(LAMP2):c.865-242C>A rs146283621 0.01021
NM_002294.3(LAMP2):c.741+224C>T rs181256167 0.01012
NM_002294.3(LAMP2):c.*2162G>A rs767123866 0.00966
NM_002294.3(LAMP2):c.1094-322G>A rs57800983 0.00828
NM_002294.3(LAMP2):c.*3459G>T rs185990694 0.00648
NM_002294.3(LAMP2):c.*237C>T rs143070918 0.00627
NM_002294.3(LAMP2):c.929-292G>A rs185059445 0.00492
NM_002294.3(LAMP2):c.865-310C>T rs181144328 0.00480
NM_002294.3(LAMP2):c.*1984G>A rs148513908 0.00454
NM_002294.3(LAMP2):c.65-58T>A rs192733755 0.00307
NM_002294.3(LAMP2):c.661G>A (p.Gly221Arg) rs145169006 0.00193
NM_002294.3(LAMP2):c.864+83G>A rs768677322 0.00113
NM_002294.3(LAMP2):c.*15T>C rs376806600 0.00042
NM_002294.3(LAMP2):c.586A>T (p.Thr196Ser) rs138991195 0.00039
NM_002294.3(LAMP2):c.1093+2478A>G rs140936359 0.00014
NM_002294.3(LAMP2):c.157C>T (p.Arg53Cys) rs752321157 0.00009
NM_002294.3(LAMP2):c.*2794T>C rs368937075 0.00008
NM_002294.3(LAMP2):c.1094-4C>T rs768756537 0.00006
NM_002294.3(LAMP2):c.771T>C (p.Asn257=) rs138435481 0.00005
NM_002294.3(LAMP2):c.299C>T (p.Ala100Val) rs397516741 0.00004
NM_002294.3(LAMP2):c.517G>A (p.Val173Ile) rs141574558 0.00004
NM_002294.3(LAMP2):c.65-13T>A rs727503121 0.00004
NM_002294.3(LAMP2):c.929-5T>C rs375341409 0.00004
NM_002294.3(LAMP2):c.204C>G (p.Asp68Glu) rs376215728 0.00003
NM_002294.3(LAMP2):c.398-3T>C rs1045629648 0.00003
NM_002294.3(LAMP2):c.64+20C>G rs1346805727 0.00003
NM_002294.3(LAMP2):c.65-20A>T rs773064698 0.00003
NM_002294.3(LAMP2):c.929-29A>G rs773549757 0.00003
NM_002294.3(LAMP2):c.340G>A (p.Val114Ile) rs377652722 0.00002
NM_002294.3(LAMP2):c.797G>A (p.Arg266His) rs200934351 0.00002
NM_002294.3(LAMP2):c.-38G>C rs1354020682 0.00001
NM_002294.3(LAMP2):c.1139C>T (p.Ala380Val) rs747301460 0.00001
NM_002294.3(LAMP2):c.1191T>C (p.Phe397=) rs752231323 0.00001
NM_002294.3(LAMP2):c.605A>C (p.His202Pro) rs730880475 0.00001
NM_002294.3(LAMP2):c.64+16C>G rs780307352 0.00001
NM_002294.3(LAMP2):c.865-9T>C rs1057522838 0.00001
NM_002294.3(LAMP2):c.972C>G (p.Pro324=) rs1229203142 0.00001
NM_001122606.1(LAMP2):c.1094-549AT[11] rs753399289
NM_002294.3(LAMP2):c.*1243A>G rs147825361
NM_002294.3(LAMP2):c.*2136GT[7] rs1556075606
NM_002294.3(LAMP2):c.*2147_*2148insGTATAT rs778330920
NM_002294.3(LAMP2):c.*2213TATATATACACA[1] rs200167553
NM_002294.3(LAMP2):c.*3347GTTA[1] rs764018077
NM_002294.3(LAMP2):c.*3459GTT[3] rs199705754
NM_002294.3(LAMP2):c.-32GTCGCCGCC[3] rs193922648
NM_002294.3(LAMP2):c.1093+17C>T rs1057521759
NM_002294.3(LAMP2):c.1093+9C>G rs371259269
NM_002294.3(LAMP2):c.150C>T (p.Phe50=) rs1057521701
NM_002294.3(LAMP2):c.398-4A>G rs1057523043
NM_002294.3(LAMP2):c.557-128dup rs775935754
NM_002294.3(LAMP2):c.557-251G>T rs148242561
NM_002294.3(LAMP2):c.65-3C>T rs769801659
NM_002294.3(LAMP2):c.742-7_742-5del rs779710402
NM_002294.3(LAMP2):c.865-13C>T rs760238519
NM_002294.3(LAMP2):c.865-311G>T rs185635351
NM_002294.3(LAMP2):c.865-8del rs746330494
NM_002294.3(LAMP2):c.877C>A (p.Arg293=) rs727503118
NM_002294.3(LAMP2):c.907A>G (p.Met303Val) rs768369360

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