List of variants in gene LGR5

Minimum submission review status:		Collection method:
Minimum conflict level: Report conflict between different conditions
Gene type: Distinguish antisense genes from sense genes
		ClinVar version:

Total variants: 86

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HGVS	dbSNP	gnomAD frequency
NM_003667.4(LGR5):c.2341C>G (p.Pro781Ala)	rs113809442	0.00718
NM_003667.4(LGR5):c.1282G>A (p.Asp428Asn)	rs146110108	0.00535
NM_003667.4(LGR5):c.1270C>G (p.Leu424Val)	rs138215571	0.00481
NM_003667.4(LGR5):c.653A>G (p.His218Arg)	rs117535164	0.00287
NM_003667.4(LGR5):c.1148A>G (p.His383Arg)	rs12303775	0.00243
NM_003667.4(LGR5):c.1304C>T (p.Ser435Leu)	rs73339868	0.00188
NM_003667.4(LGR5):c.2031A>G (p.Pro677=)	rs138932490	0.00172
NM_003667.4(LGR5):c.2021C>T (p.Thr674Met)	rs148090210	0.00068
NM_003667.4(LGR5):c.640G>A (p.Val214Ile)	rs148122019	0.00051
NM_003667.4(LGR5):c.384C>T (p.His128=)	rs142698551	0.00048
NM_003667.4(LGR5):c.1407G>C (p.Lys469Asn)	rs200359280	0.00025
NM_003667.4(LGR5):c.2609C>A (p.Thr870Asn)	rs145019729	0.00022
NM_003667.4(LGR5):c.1247A>G (p.Asn416Ser)	rs140436677	0.00015
NM_003667.4(LGR5):c.2461A>G (p.Ile821Val)	rs149958967	0.00007
NM_003667.4(LGR5):c.223A>G (p.Met75Val)	rs764346723	0.00004
NM_003667.4(LGR5):c.668A>G (p.His223Arg)	rs757701299	0.00004
NM_003667.4(LGR5):c.1412T>C (p.Ile471Thr)	rs139824571	0.00003
NM_003667.4(LGR5):c.2182G>A (p.Ala728Thr)	rs749746712	0.00003
NM_003667.4(LGR5):c.256C>A (p.Leu86Met)	rs370230855	0.00003
NM_003667.4(LGR5):c.1492G>T (p.Gly498Cys)	rs1033508698	0.00002
NM_003667.4(LGR5):c.1613C>T (p.Ser538Leu)	rs201703093	0.00002
NM_003667.4(LGR5):c.2477A>T (p.His826Leu)	rs1372193090	0.00002
NM_003667.4(LGR5):c.1328A>G (p.His443Arg)	rs750353686	0.00001
NM_003667.4(LGR5):c.134G>A (p.Arg45Lys)	rs1871696412	0.00001
NM_003667.4(LGR5):c.1364C>A (p.Ala455Asp)	rs536797990	0.00001
NM_003667.4(LGR5):c.1466A>G (p.Tyr489Cys)	rs150729317	0.00001
NM_003667.4(LGR5):c.1749C>G (p.Phe583Leu)	rs771072085	0.00001
NM_003667.4(LGR5):c.2032T>C (p.Phe678Leu)	rs758757228	0.00001
NM_003667.4(LGR5):c.2174A>G (p.Tyr725Cys)	rs1879218439	0.00001
NM_003667.4(LGR5):c.2423T>C (p.Val808Ala)	rs1879233745	0.00001
NM_003667.4(LGR5):c.2582C>A (p.Ser861Tyr)	rs1263559604	0.00001
NM_003667.4(LGR5):c.2625C>A (p.Ser875Arg)	rs745866493	0.00001
NM_003667.4(LGR5):c.262A>T (p.Ser88Cys)	rs143081365	0.00001
NM_003667.4(LGR5):c.418C>T (p.Leu140Phe)	rs1876525726	0.00001
NM_003667.4(LGR5):c.448A>C (p.Ile150Leu)	rs1212398028	0.00001
NM_003667.4(LGR5):c.601A>T (p.Ile201Leu)	rs768780796	0.00001
NM_003667.4(LGR5):c.654T>G (p.His218Gln)	rs1877780344	0.00001
NM_003667.4(LGR5):c.656A>C (p.Asn219Thr)	rs1877780526	0.00001
GRCh37/hg19 12q21.1(chr12:71722986-71973110)x4
GRCh37/hg19 12q21.1(chr12:71722986-71978728)x3
NM_003667.4(LGR5):c.1063C>G (p.Gln355Glu)	rs2499434358
NM_003667.4(LGR5):c.1066G>A (p.Val356Met)
NM_003667.4(LGR5):c.1067T>G (p.Val356Gly)
NM_003667.4(LGR5):c.1145G>A (p.Arg382Lys)	rs758187408
NM_003667.4(LGR5):c.1162G>A (p.Glu388Lys)
NM_003667.4(LGR5):c.1165A>T (p.Ile389Phe)
NM_003667.4(LGR5):c.1228A>G (p.Ile410Val)
NM_003667.4(LGR5):c.1290G>T (p.Ser430=)	rs80013431
NM_003667.4(LGR5):c.1395T>A (p.Phe465Leu)	rs776281947
NM_003667.4(LGR5):c.1513G>A (p.Asp505Asn)	rs750963943
NM_003667.4(LGR5):c.1546G>A (p.Ala516Thr)	rs1300080811
NM_003667.4(LGR5):c.1558C>A (p.Arg520Ser)	rs145133989
NM_003667.4(LGR5):c.1559G>A (p.Arg520His)
NM_003667.4(LGR5):c.1685T>C (p.Ile562Thr)
NM_003667.4(LGR5):c.1795A>G (p.Ile599Val)
NM_003667.4(LGR5):c.1813C>T (p.Leu605Phe)
NM_003667.4(LGR5):c.1822G>T (p.Val608Phe)
NM_003667.4(LGR5):c.1828A>T (p.Ser610Cys)	rs2499480843
NM_003667.4(LGR5):c.1882G>A (p.Gly628Ser)
NM_003667.4(LGR5):c.1909T>C (p.Cys637Arg)
NM_003667.4(LGR5):c.2146C>T (p.Pro716Ser)	rs2499482265
NM_003667.4(LGR5):c.2168T>C (p.Met723Thr)
NM_003667.4(LGR5):c.2195T>G (p.Leu732Arg)
NM_003667.4(LGR5):c.2211C>G (p.Phe737Leu)	rs2137486611
NM_003667.4(LGR5):c.2404A>G (p.Lys802Glu)	rs2499483295
NM_003667.4(LGR5):c.2438C>A (p.Ala813Glu)
NM_003667.4(LGR5):c.248C>T (p.Pro83Leu)
NM_003667.4(LGR5):c.2517C>T (p.Tyr839=)
NM_003667.4(LGR5):c.2561C>G (p.Ser854Cys)
NM_003667.4(LGR5):c.257T>G (p.Leu86Arg)	rs149049114
NM_003667.4(LGR5):c.2593A>G (p.Thr865Ala)
NM_003667.4(LGR5):c.2645C>T (p.Pro882Leu)
NM_003667.4(LGR5):c.2656C>A (p.Pro886Thr)
NM_003667.4(LGR5):c.2663C>T (p.Pro888Leu)
NM_003667.4(LGR5):c.285A>G (p.Leu95=)	rs752508501
NM_003667.4(LGR5):c.286C>T (p.Arg96Cys)
NM_003667.4(LGR5):c.353T>C (p.Val118Ala)
NM_003667.4(LGR5):c.37C>A (p.Pro13Thr)	rs770233037
NM_003667.4(LGR5):c.383A>T (p.His128Leu)
NM_003667.4(LGR5):c.413G>A (p.Arg138Gln)
NM_003667.4(LGR5):c.417C>A (p.Ser139Arg)	rs779090996
NM_003667.4(LGR5):c.429G>A (p.Leu143=)
NM_003667.4(LGR5):c.667C>T (p.His223Tyr)
NM_003667.4(LGR5):c.702C>G (p.His234Gln)
NM_003667.4(LGR5):c.854C>T (p.Thr285Ile)
NM_003667.4(LGR5):c.92T>C (p.Leu31Pro)

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