ClinVar Miner

List of variants in gene LRRK2 reported as benign by GeneDx

Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 160
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HGVS dbSNP gnomAD frequency
NM_198578.4(LRRK2):c.5757+195G>A rs2404833 0.98022
NM_198578.4(LRRK2):c.152-56G>A rs2723273 0.97181
NM_198578.4(LRRK2):c.237+100A>G rs2256286 0.97178
NM_198578.4(LRRK2):c.958+299A>C rs2723263 0.96957
NM_198578.4(LRRK2):c.347+100C>T rs1352878 0.94292
NM_198578.4(LRRK2):c.347+45T>C rs1352879 0.94289
NM_198578.4(LRRK2):c.7463-88A>G rs4768238 0.86889
NM_198578.4(LRRK2):c.6280+222A>G rs7131694 0.86481
NM_198578.4(LRRK2):c.6382-160T>C rs7307310 0.85519
NM_198578.4(LRRK2):c.2501-96C>T rs4473003 0.85239
NM_198578.4(LRRK2):c.6770+253A>G rs10748040 0.76793
NM_198578.4(LRRK2):c.6770+101G>A rs890575 0.76772
NM_198578.4(LRRK2):c.6281-138C>T rs1365766 0.76749
NM_198578.4(LRRK2):c.7028+57A>G rs3789330 0.76741
NM_198578.4(LRRK2):c.4739-122T>C rs1427267 0.70200
NM_198578.4(LRRK2):c.5317+32C>T rs7137665 0.69941
NM_198578.4(LRRK2):c.4872C>A (p.Gly1624=) rs1427263 0.69918
NM_198578.4(LRRK2):c.4190-62A>T rs7305344 0.69723
NM_198578.4(LRRK2):c.7190T>C (p.Met2397Thr) rs3761863 0.61824
NM_198578.4(LRRK2):c.7181+177A>G rs7134408 0.61783
NM_198578.4(LRRK2):c.7462+128A>G rs3789328 0.60756
NM_198578.4(LRRK2):c.5016-218C>T rs10748034 0.56823
NM_198578.4(LRRK2):c.4911A>G (p.Lys1637=) rs11176013 0.56784
NM_198578.4(LRRK2):c.4828-31T>C rs1896252 0.56777
NM_198578.4(LRRK2):c.5015+211G>A rs10748030 0.56775
NM_198578.4(LRRK2):c.4739-92C>T rs1427266 0.56767
NM_198578.4(LRRK2):c.4828-230T>G rs1896254 0.56765
NM_198578.4(LRRK2):c.4827+83A>G rs721713 0.56753
NM_198578.4(LRRK2):c.5016-51A>T rs10878368 0.56753
NM_198578.4(LRRK2):c.5170+258T>C rs4768229 0.56749
NM_198578.4(LRRK2):c.5170+23T>A rs7307276 0.56731
NM_198578.4(LRRK2):c.4827+226G>A rs721711 0.56707
NM_198578.4(LRRK2):c.4828-195T>C rs1896253 0.56612
NM_198578.4(LRRK2):c.5457T>C (p.Gly1819=) rs10878371 0.56374
NM_198578.4(LRRK2):c.4827+216G>A rs721712 0.56345
NM_198578.4(LRRK2):c.5015+290G>T rs10748032 0.56301
NM_198578.4(LRRK2):c.5015+289T>C rs10748031 0.56278
NM_198578.4(LRRK2):c.457T>C (p.Leu153=) rs10878245 0.50692
NM_198578.4(LRRK2):c.6281-206del rs66513412 0.49780
NM_198578.4(LRRK2):c.6281-205A>C rs199606989 0.49580
NM_198578.4(LRRK2):c.1181+284G>A rs1491938 0.47689
NM_198578.4(LRRK2):c.2808+233C>T rs5006481 0.47539
NM_198578.4(LRRK2):c.5757+190A>G rs2404832 0.42557
NM_198578.4(LRRK2):c.1544-54A>G rs10784461 0.41647
NM_198578.4(LRRK2):c.3096+142C>T rs11175922 0.40155
NM_198578.4(LRRK2):c.3347+248C>T rs7962011 0.37530
NM_198578.4(LRRK2):c.1102-10C>A rs7955902 0.32552
NM_198578.4(LRRK2):c.839-160C>T rs732374 0.32037
NM_198578.4(LRRK2):c.5170+312G>A rs4768230 0.30000
NM_198578.4(LRRK2):c.4739-169A>T rs7973058 0.27249
NM_198578.4(LRRK2):c.4939T>A (p.Ser1647Thr) rs11564148 0.26687
NM_198578.4(LRRK2):c.6324G>A (p.Glu2108=) rs10878405 0.26650
NM_198578.4(LRRK2):c.6280+110T>G rs74467833 0.25773
NM_198578.4(LRRK2):c.572-127T>C rs6581622 0.25326
NM_198578.4(LRRK2):c.571+195C>T rs10878247 0.24939
NM_198578.4(LRRK2):c.1543+307C>T rs17465870 0.16067
NM_198578.4(LRRK2):c.5509+325_5510-324del rs60750674 0.15240
NM_198578.4(LRRK2):c.4317+117C>A rs11175966 0.15133
NM_198578.4(LRRK2):c.5015+32A>G rs11564205 0.15131
NM_198578.4(LRRK2):c.1181+250A>G rs1491939 0.14887
NM_198578.4(LRRK2):c.571+194T>G rs10878246 0.14431
NM_198578.4(LRRK2):c.5948+48C>T rs2404834 0.14039
NM_198578.4(LRRK2):c.3960-105C>T rs11564149 0.13874
NM_198578.4(LRRK2):c.*96T>C rs66737902 0.13862
NM_198578.4(LRRK2):c.437-163G>A rs10878244 0.13606
NM_198578.4(LRRK2):c.1288+130G>A rs7969677 0.13188
NM_198578.4(LRRK2):c.2501-236T>C rs11564150 0.12973
NM_198578.4(LRRK2):c.5757+287C>A rs17466486 0.12922
NM_198578.4(LRRK2):c.4536+106T>C rs41286474 0.12474
NM_198578.4(LRRK2):c.7155A>G (p.Gly2385=) rs33962975 0.11278
NM_198578.4(LRRK2):c.3496+166A>C rs10878336 0.11200
NM_198578.4(LRRK2):c.1653C>G (p.Asn551Lys) rs7308720 0.09815
NM_198578.4(LRRK2):c.2690-312C>T rs11175913 0.09653
NM_198578.4(LRRK2):c.2501-212A>G rs4318033 0.09611
NM_198578.4(LRRK2):c.2878+205A>G rs12314692 0.09345
NM_198578.4(LRRK2):c.2857T>C (p.Leu953=) rs7966550 0.09103
NM_198578.4(LRRK2):c.5171-247C>T rs4423250 0.08687
NM_198578.4(LRRK2):c.6381+52G>A rs11176143 0.08308
NM_198578.4(LRRK2):c.2689+145A>G rs11564270 0.07244
NM_198578.4(LRRK2):c.7463-131A>T rs12426498 0.06307
NM_198578.4(LRRK2):c.4269G>A (p.Lys1423=) rs11175964 0.06033
NM_198578.4(LRRK2):c.5509+162T>C rs11176022 0.06025
NM_198578.4(LRRK2):c.2242-93G>T rs73108368 0.06017
NM_198578.4(LRRK2):c.4190-137C>T rs11175963 0.05962
NM_198578.4(LRRK2):c.436+271A>T rs2723269 0.05933
NM_198578.4(LRRK2):c.436+38A>T rs2131088 0.05888
NM_198578.4(LRRK2):c.959-282A>G rs17443414 0.05775
NM_198578.4(LRRK2):c.2167A>G (p.Ile723Val) rs10878307 0.04677
NM_198578.4(LRRK2):c.5656+35G>A rs17484342 0.04316
NM_198578.4(LRRK2):c.6844-73G>A rs79836766 0.04144
NM_198578.4(LRRK2):c.4537-126A>G rs12302298 0.03393
NM_198578.4(LRRK2):c.3591-89T>A rs72546323 0.03385
NM_198578.4(LRRK2):c.7391-44T>C rs3789329 0.03290
NM_198578.4(LRRK2):c.3590+188T>C rs17491082 0.03202
NM_198578.4(LRRK2):c.4624C>T (p.Pro1542Ser) rs33958906 0.02988
NM_198578.4(LRRK2):c.2242-22C>T rs36220738 0.02907
NM_198578.4(LRRK2):c.2690-251C>T rs57315777 0.02572
NM_198578.4(LRRK2):c.2690-65A>T rs73268087 0.02565
NM_198578.4(LRRK2):c.707-189T>C rs17519580 0.02557
NM_198578.4(LRRK2):c.3348-188A>G rs56701518 0.02178
NM_198578.4(LRRK2):c.1942-272C>A rs12320863 0.02112
NM_198578.4(LRRK2):c.1418+72A>G rs10506149 0.01933
NM_198578.4(LRRK2):c.6844-14_6844-13insA rs150964683 0.01681
NM_198578.4(LRRK2):c.4317+12del rs200829235 0.01470
NM_198578.4(LRRK2):c.6241A>G (p.Asn2081Asp) rs33995883 0.01276
NM_198578.4(LRRK2):c.3097-134T>G rs36220743 0.01021
NM_198578.4(LRRK2):c.4541G>A (p.Arg1514Gln) rs35507033 0.00526
NM_198578.4(LRRK2):c.5163A>G (p.Ser1721=) rs79909111 0.00293
NM_198578.4(LRRK2):c.5510-9A>G rs41286460 0.00252
NM_198578.4(LRRK2):c.7029-41A>G rs184962630 0.00250
NM_198578.4(LRRK2):c.437-38A>C rs150000948 0.00173
NM_198578.4(LRRK2):c.225G>A (p.Ala75=) rs75054132 0.00146
NM_198578.4(LRRK2):c.1740A>T (p.Leu580Phe) rs145906734 0.00132
NM_198578.4(LRRK2):c.571+33T>C rs191178638 0.00122
NM_198578.4(LRRK2):c.6510C>A (p.Gly2170=) rs34869625 0.00096
NM_198578.4(LRRK2):c.4827+9C>A rs113735323 0.00089
NM_198578.4(LRRK2):c.347+2T>C rs141221000 0.00084
NM_198578.4(LRRK2):c.2378G>T (p.Arg793Met) rs35173587 0.00082
NM_198578.4(LRRK2):c.347A>G (p.Gln116Arg) rs144883021 0.00082
NM_198578.4(LRRK2):c.7182-27T>G rs17520634 0.00081
NM_198578.4(LRRK2):c.7429C>T (p.Arg2477Trp) rs138780308 0.00035
NM_198578.4(LRRK2):c.2264C>T (p.Pro755Leu) rs34410987 0.00027
NM_198578.4(LRRK2):c.4536+3A>G rs41286476 0.00026
NM_198578.4(LRRK2):c.1256C>T (p.Ala419Val) rs34594498 0.00025
NM_198578.4(LRRK2):c.5949-39A>G rs34903939 0.00025
NM_198578.4(LRRK2):c.344A>C (p.His115Pro) rs201439315 0.00006
NM_198578.4(LRRK2):c.152-50G>A rs199610083 0.00005
NM_198578.4(LRRK2):c.1656+68C>G rs10784462
NM_198578.4(LRRK2):c.1802-11dup rs200529791
NM_198578.4(LRRK2):c.2500+142del rs55933352
NM_198578.4(LRRK2):c.2501-9dup rs36220740
NM_198578.4(LRRK2):c.2808+189A>G rs4483664
NM_198578.4(LRRK2):c.2808+232_2808+233insTA rs1491426750
NM_198578.4(LRRK2):c.2808+233_2808+234del rs66487867
NM_198578.4(LRRK2):c.2808+234AT[10] rs1407049752
NM_198578.4(LRRK2):c.2879-24TTGT[2] rs532695102
NM_198578.4(LRRK2):c.3347+286AT[15] rs113272586
NM_198578.4(LRRK2):c.3347+286AT[9] rs113272586
NM_198578.4(LRRK2):c.3347+306_3347+307insTAAA rs57355300
NM_198578.4(LRRK2):c.3347+306_3347+307insTATATAAATA rs1485268496
NM_198578.4(LRRK2):c.3348-208_3348-182del rs11270630
NM_198578.4(LRRK2):c.3497-8del rs201739149
NM_198578.4(LRRK2):c.3591-273C>T rs10878341
NM_198578.4(LRRK2):c.4193G>A (p.Arg1398His) rs7133914
NM_198578.4(LRRK2):c.4317+53GT[10] rs10650388
NM_198578.4(LRRK2):c.437-145AACA[5] rs58016929
NM_198578.4(LRRK2):c.4537-276dup rs57421387
NM_198578.4(LRRK2):c.4828-202del rs5797667
NM_198578.4(LRRK2):c.4883G>C (p.Arg1628Pro) rs33949390
NM_198578.4(LRRK2):c.5510-268A>G rs10878372
NM_198578.4(LRRK2):c.6110-190G>T rs10784522
NM_198578.4(LRRK2):c.6280+111del rs11289057
NM_198578.4(LRRK2):c.6281-206T>C rs2896977
NM_198578.4(LRRK2):c.6577-172C>T rs7308626
NM_198578.4(LRRK2):c.6844-241TTG[4] rs60866417
NM_198578.4(LRRK2):c.6844-8dup rs72546334
NM_198578.4(LRRK2):c.7029-87_7029-86insGCAT rs10626458
NM_198578.4(LRRK2):c.7029-9del rs11317573
NM_198578.4(LRRK2):c.959-160C>T rs7134379
NM_198578.4(LRRK2):c.959-216dup rs575085073

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