ClinVar Miner

List of variants in gene MLH1 reported as likely benign for not provided

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Gene type:
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Total variants: 199
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HGVS dbSNP gnomAD frequency
NM_000249.4(MLH1):c.655A>G (p.Ile219Val) rs1799977 0.23048
NM_000249.4(MLH1):c.1039-31del rs756911937 0.04867
NM_000249.4(MLH1):c.453+192C>T rs4647248 0.01408
NM_000249.4(MLH1):c.208-138A>C rs4647219 0.01367
NM_000249.4(MLH1):c.1038+245T>C rs56232171 0.01161
NM_000249.4(MLH1):c.1039-336T>C rs113939899 0.01037
NM_000249.4(MLH1):c.1732-19T>A rs77120160 0.00923
NM_000249.4(MLH1):c.1039-26T>A rs1360955428 0.00920
NM_000249.4(MLH1):c.1038+246A>T rs55824225 0.00808
NM_000249.4(MLH1):c.1897-145C>G rs145050866 0.00694
NM_000249.4(MLH1):c.1732-152G>C rs116313999 0.00671
NM_000249.4(MLH1):c.1897-202T>G rs113994452 0.00557
NM_000249.4(MLH1):c.380+164A>G rs4647235 0.00553
NM_000249.4(MLH1):c.885-460G>A rs150319478 0.00427
NM_000249.4(MLH1):c.453+25A>G rs4647246 0.00414
NM_000249.4(MLH1):c.1852A>G (p.Lys618Glu) rs35001569 0.00399
NM_000249.4(MLH1):c.307-29C>A rs139620056 0.00398
NM_000249.4(MLH1):c.1038+106G>C rs55920215 0.00378
NM_000249.4(MLH1):c.677+168C>A rs56008923 0.00357
NM_000249.4(MLH1):c.307-1563C>T rs148965625 0.00349
NM_000249.4(MLH1):c.1732-2430T>C rs138557254 0.00345
NM_000249.4(MLH1):c.1410-1364A>G rs192737280 0.00302
NM_000249.4(MLH1):c.1963A>G (p.Ile655Val) rs55907433 0.00297
NM_000249.4(MLH1):c.790+10A>G rs182733777 0.00188
NM_000249.4(MLH1):c.885-24T>A rs201594027 0.00164
NM_000249.4(MLH1):c.2146G>A (p.Val716Met) rs35831931 0.00143
NM_000249.4(MLH1):c.-7C>T rs104894994 0.00115
NM_000249.4(MLH1):c.-28A>G rs56198082 0.00110
NM_000249.4(MLH1):c.1217G>A (p.Ser406Asn) rs41294980 0.00087
NM_000249.4(MLH1):c.375A>G (p.Ala125=) rs1800144 0.00062
NM_000249.4(MLH1):c.1039-7A>T rs1200394799 0.00061
NM_000249.4(MLH1):c.702G>A (p.Glu234=) rs35908749 0.00041
NM_000249.4(MLH1):c.198C>T (p.Thr66=) rs61751642 0.00040
NM_000249.4(MLH1):c.977T>C (p.Val326Ala) rs63751049 0.00037
NM_000249.4(MLH1):c.1321G>A (p.Ala441Thr) rs63750365 0.00034
NM_000249.4(MLH1):c.1897-17C>G rs2308316 0.00029
NM_000249.4(MLH1):c.1166G>A (p.Arg389Gln) rs63750361 0.00020
NM_000249.4(MLH1):c.394G>C (p.Asp132His) rs28930073 0.00019
NM_000249.4(MLH1):c.2101C>A (p.Gln701Lys) rs63750114 0.00016
NM_000249.4(MLH1):c.65G>C (p.Gly22Ala) rs41295280 0.00016
NM_000249.4(MLH1):c.1820T>A (p.Leu607His) rs41295284 0.00015
NM_000249.4(MLH1):c.803A>G (p.Glu268Gly) rs63750650 0.00014
NM_000249.4(MLH1):c.1050A>G (p.Pro350=) rs137937003 0.00012
NM_000249.4(MLH1):c.843A>C (p.Ala281=) rs146796765 0.00012
NM_000249.4(MLH1):c.626A>G (p.Asn209Ser) rs150478207 0.00011
NM_000249.4(MLH1):c.884+16A>G rs377598055 0.00011
NM_000249.4(MLH1):c.1964T>C (p.Ile655Thr) rs63751225 0.00010
NM_000249.4(MLH1):c.1808C>G (p.Pro603Arg) rs63750876 0.00009
NM_000249.4(MLH1):c.2103+14G>A rs769533221 0.00009
NM_000249.4(MLH1):c.1742C>T (p.Pro581Leu) rs63751684 0.00008
NM_000249.4(MLH1):c.117-10G>A rs576724240 0.00007
NM_000249.4(MLH1):c.1379A>C (p.Glu460Ala) rs202038499 0.00007
NM_000249.4(MLH1):c.1908G>A (p.Leu636=) rs1800145 0.00007
NM_000249.4(MLH1):c.277A>G (p.Ser93Gly) rs41295282 0.00007
NM_000249.4(MLH1):c.42A>C (p.Thr14=) rs369737664 0.00007
NM_000249.4(MLH1):c.589-8T>C rs1017112753 0.00007
NM_000249.4(MLH1):c.649C>T (p.Arg217Cys) rs4986984 0.00007
NM_000249.4(MLH1):c.1013A>G (p.Asn338Ser) rs63751467 0.00006
NM_000249.4(MLH1):c.1104G>A (p.Ser368=) rs769364808 0.00006
NM_000249.4(MLH1):c.1360G>C (p.Gly454Arg) rs63750527 0.00006
NM_000249.4(MLH1):c.1733A>G (p.Glu578Gly) rs63751612 0.00006
NM_000249.4(MLH1):c.552A>T (p.Ser184=) rs35225190 0.00006
NM_000249.4(MLH1):c.69A>G (p.Glu23=) rs63750555 0.00006
NM_000249.4(MLH1):c.954C>T (p.His318=) rs146777069 0.00006
NM_000249.4(MLH1):c.1020C>G (p.Ser340=) rs374770981 0.00005
NM_000249.4(MLH1):c.1128T>C (p.Asp376=) rs267607824 0.00005
NM_000249.4(MLH1):c.1153C>T (p.Arg385Cys) rs63750760 0.00005
NM_000249.4(MLH1):c.1392T>C (p.Pro464=) rs63750201 0.00005
NM_000249.4(MLH1):c.438A>G (p.Gln146=) rs377279035 0.00005
NM_000249.3(MLH1):c.-100T>C rs4647204 0.00004
NM_000249.4(MLH1):c.1269G>A (p.Arg423=) rs373076967 0.00004
NM_000249.4(MLH1):c.1284T>C (p.Asp428=) rs772555970 0.00004
NM_000249.4(MLH1):c.1565G>A (p.Arg522Gln) rs63751630 0.00004
NM_000249.4(MLH1):c.1779A>G (p.Pro593=) rs786201766 0.00004
NM_000249.4(MLH1):c.2252A>G (p.Lys751Arg) rs140195825 0.00004
NM_000249.4(MLH1):c.579A>G (p.Ser193=) rs587781038 0.00004
NM_000249.4(MLH1):c.808A>G (p.Thr270Ala) rs371302926 0.00004
NM_000249.4(MLH1):c.1730C>T (p.Ser577Leu) rs56185292 0.00003
NM_000249.4(MLH1):c.1743G>A (p.Pro581=) rs567838745 0.00003
NM_000249.4(MLH1):c.191A>G (p.Asn64Ser) rs63750952 0.00003
NM_000249.4(MLH1):c.1990-93C>T rs757567978 0.00003
NM_000249.4(MLH1):c.927C>A (p.Pro309=) rs63749896 0.00003
NM_000249.4(MLH1):c.1515T>C (p.Ser505=) rs774699212 0.00002
NM_000249.4(MLH1):c.1872C>T (p.Asp624=) rs145535636 0.00002
NM_000249.4(MLH1):c.303T>G (p.Gly101=) rs4647220 0.00002
NM_000249.4(MLH1):c.45G>C (p.Val15=) rs768409958 0.00002
NM_000249.4(MLH1):c.595G>C (p.Glu199Gln) rs63749887 0.00002
NM_000249.4(MLH1):c.884+63C>T rs911822722 0.00002
NM_000249.4(MLH1):c.974G>A (p.Arg325Gln) rs63750268 0.00002
NM_000249.4(MLH1):c.108T>C (p.Ile36=) rs730881747 0.00001
NM_000249.4(MLH1):c.1103C>T (p.Ser368Leu) rs201673334 0.00001
NM_000249.4(MLH1):c.116+4C>T rs1057523910 0.00001
NM_000249.4(MLH1):c.1164C>T (p.Ser388=) rs1060504014 0.00001
NM_000249.4(MLH1):c.1236C>T (p.Val412=) rs369576099 0.00001
NM_000249.4(MLH1):c.1327A>C (p.Lys443Gln) rs34213726 0.00001
NM_000249.4(MLH1):c.1401C>T (p.Ser467=) rs587778910 0.00001
NM_000249.4(MLH1):c.1452T>C (p.Asp484=) rs587778916 0.00001
NM_000249.4(MLH1):c.1460G>A (p.Arg487Gln) rs587778917 0.00001
NM_000249.4(MLH1):c.1506C>T (p.Asn502=) rs997236053 0.00001
NM_000249.4(MLH1):c.1512T>C (p.Thr504=) rs749683911 0.00001
NM_000249.4(MLH1):c.1519T>C (p.Leu507=) rs864622718 0.00001
NM_000249.4(MLH1):c.1551A>G (p.Gly517=) rs373322226 0.00001
NM_000249.4(MLH1):c.1558+4C>T rs531873434 0.00001
NM_000249.4(MLH1):c.1731+8T>C rs370108219 0.00001
NM_000249.4(MLH1):c.1878C>T (p.Phe626=) rs63751214 0.00001
NM_000249.4(MLH1):c.1897-7C>T rs373078652 0.00001
NM_000249.4(MLH1):c.1938T>C (p.Tyr646=) rs786202774 0.00001
NM_000249.4(MLH1):c.1989+14C>T rs763711727 0.00001
NM_000249.4(MLH1):c.1990-6G>A rs117221851 0.00001
NM_000249.4(MLH1):c.2034A>G (p.Lys678=) rs894876691 0.00001
NM_000249.4(MLH1):c.2070C>T (p.Tyr690=) rs550890395 0.00001
NM_000249.4(MLH1):c.2082G>A (p.Glu694=) rs1057521441 0.00001
NM_000249.4(MLH1):c.2190T>C (p.Pro730=) rs1057521673 0.00001
NM_000249.4(MLH1):c.222T>C (p.Asp74=) rs755073786 0.00001
NM_000249.4(MLH1):c.24T>A (p.Ile8=) rs748406142 0.00001
NM_000249.4(MLH1):c.27G>T (p.Arg9=) rs759680369 0.00001
NM_000249.4(MLH1):c.30G>T (p.Arg10=) rs876660759 0.00001
NM_000249.4(MLH1):c.351G>A (p.Thr117=) rs61751643 0.00001
NM_000249.4(MLH1):c.454-6G>A rs781238673 0.00001
NM_000249.4(MLH1):c.51C>T (p.Asn17=) rs761498953 0.00001
NM_000249.4(MLH1):c.534A>G (p.Glu178=) rs786202121 0.00001
NM_000249.4(MLH1):c.546-9C>T rs878853789 0.00001
NM_000249.4(MLH1):c.563C>T (p.Ala188Val) rs777971431 0.00001
NM_000249.4(MLH1):c.589-13G>A rs757462513 0.00001
NM_000249.4(MLH1):c.636C>T (p.Thr212=) rs138735345 0.00001
NM_000249.4(MLH1):c.677+10T>C rs979056997 0.00001
NM_000249.4(MLH1):c.884+10C>T rs864622424 0.00001
NM_000249.4(MLH1):c.885-5G>T rs267607802 0.00001
NM_000249.4(MLH1):c.918T>C (p.Asn306=) rs587779054 0.00001
NM_000249.4(MLH1):c.990C>T (p.Ile330=) rs372578171 0.00001
NM_000249.3(MLH1):c.-117G>T rs565891017
NM_000249.4(MLH1):c.*158GATT[1] rs796807655
NM_000249.4(MLH1):c.*32CTT[1] rs193922366
NM_000249.4(MLH1):c.1020C>T (p.Ser340=) rs374770981
NM_000249.4(MLH1):c.1039-10_1039-8dup rs57509953
NM_000249.4(MLH1):c.1039-11_1039-8dup rs57509953
NM_000249.4(MLH1):c.1039-29_1039-24del rs1441824996
NM_000249.4(MLH1):c.1039-30_1039-29insTT
NM_000249.4(MLH1):c.1039-31_1039-24del rs755745938
NM_000249.4(MLH1):c.1039-31_1039-25del rs563315461
NM_000249.4(MLH1):c.1039-31_1039-26del rs1178900468
NM_000249.4(MLH1):c.1039-6del rs1553650466
NM_000249.4(MLH1):c.1039-844_1039-842del rs59905922
NM_000249.4(MLH1):c.1039-8_1039-7insTA rs535965616
NM_000249.4(MLH1):c.1039-8_1039-7insTTTTTTTA rs535965616
NM_000249.4(MLH1):c.1039-8dup rs57509953
NM_000249.4(MLH1):c.1039-9T>A rs1060504009
NM_000249.4(MLH1):c.1117G>A (p.Gly373Arg) rs766904735
NM_000249.4(MLH1):c.114C>T (p.Asn38=) rs267607706
NM_000249.4(MLH1):c.117-43_117-39del rs587778895
NM_000249.4(MLH1):c.1224C>G (p.Pro408=) rs1575536100
NM_000249.4(MLH1):c.1266C>T (p.Gly422=) rs63750791
NM_000249.4(MLH1):c.1268G>A (p.Arg423Lys) rs370687064
NM_000249.4(MLH1):c.1331A>G (p.Asn444Ser) rs763189331
NM_000249.4(MLH1):c.1409+1153C>T rs116685008
NM_000249.4(MLH1):c.1410-254G>A rs9282784
NM_000249.4(MLH1):c.1420C>G (p.Arg474Gly) rs147939838
NM_000249.4(MLH1):c.1476A>C (p.Ala492=) rs864622619
NM_000249.4(MLH1):c.1542T>C (p.Asn514=) rs775456144
NM_000249.4(MLH1):c.1558+6T>C rs730881749
NM_000249.4(MLH1):c.1559-9G>C rs762630771
NM_000249.4(MLH1):c.1569G>T (p.Glu523Asp) rs63751680
NM_000249.4(MLH1):c.1618T>C (p.Leu540=) rs1448439825
NM_000249.4(MLH1):c.1667+248TTTG[6] rs3067695
NM_000249.4(MLH1):c.1731+247C>T rs116628044
NM_000249.4(MLH1):c.1732-19T>C rs77120160
NM_000249.4(MLH1):c.1732-7T>C rs745745276
NM_000249.4(MLH1):c.1737A>G (p.Pro579=) rs1553662601
NM_000249.4(MLH1):c.1852_1853delinsGC (p.Lys618Ala) rs35502531
NM_000249.4(MLH1):c.1853A>C (p.Lys618Thr) rs63750449
NM_000249.4(MLH1):c.1853A>G (p.Lys618Arg) rs63750449
NM_000249.4(MLH1):c.1897-18C>A rs1553663682
NM_000249.4(MLH1):c.2040C>T (p.Cys680=) rs63749867
NM_000249.4(MLH1):c.2074T>C (p.Ser692Pro) rs587779957
NM_000249.4(MLH1):c.2088C>G (p.Thr696=) rs1060504015
NM_000249.4(MLH1):c.2091C>T (p.Leu697=) rs536488280
NM_000249.4(MLH1):c.2157T>C (p.Ile719=)
NM_000249.4(MLH1):c.2235C>T (p.Asn745=) rs864622677
NM_000249.4(MLH1):c.2256C>A (p.Val752=) rs2085654744
NM_000249.4(MLH1):c.290A>G (p.Tyr97Cys) rs773647920
NM_000249.4(MLH1):c.307-10T>C rs572853043
NM_000249.4(MLH1):c.342T>C (p.Thr114=) rs1057520553
NM_000249.4(MLH1):c.381-119_381-116del rs4647243
NM_000249.4(MLH1):c.516A>G (p.Glu172=) rs748128054
NM_000249.4(MLH1):c.546-16del rs1559529693
NM_000249.4(MLH1):c.546-5del rs1553643965
NM_000249.4(MLH1):c.589-9G>T rs566497442
NM_000249.4(MLH1):c.589-9_589-6del rs587779026
NM_000249.4(MLH1):c.589-9_589-7delinsATC rs1553644107
NM_000249.4(MLH1):c.621A>G (p.Leu207=) rs770554901
NM_000249.4(MLH1):c.678-14C>T
NM_000249.4(MLH1):c.678A>T (p.Arg226=) rs786203360
NM_000249.4(MLH1):c.711C>T (p.Thr237=) rs1057523923
NM_000249.4(MLH1):c.780C>T (p.Leu260=) rs587779038
NM_000249.4(MLH1):c.85G>T (p.Ala29Ser) rs63750656
NM_000249.4(MLH1):c.876G>A (p.Leu292=) rs773452312
NM_000249.4(MLH1):c.885-12T>C rs1575508554
NM_000249.4(MLH1):c.885-21TC[2] rs267607804
NM_000249.4(MLH1):c.91_92delinsTG (p.Ala31Cys) rs63749994

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