ClinVar Miner

List of variants in gene MSH6 reported as benign by Invitae

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Gene type:
ClinVar version:
Total variants: 203
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HGVS dbSNP gnomAD frequency
NM_000179.3(MSH6):c.3557-144G>A rs7562367 0.71536
NM_000179.3(MSH6):c.3438+14A>T rs2020911 0.32279
NM_000179.3(MSH6):c.540T>C (p.Asp180=) rs1800935 0.23857
NM_000179.3(MSH6):c.116G>A (p.Gly39Glu) rs1042821 0.18742
NM_000179.3(MSH6):c.276A>G (p.Pro92=) rs1800932 0.14697
NM_000179.3(MSH6):c.186C>A (p.Arg62=) rs1042820 0.12806
NM_000179.3(MSH6):c.3557-185C>T rs3136357 0.07557
NM_000179.3(MSH6):c.642C>T (p.Tyr214=) rs1800937 0.07457
NM_000179.3(MSH6):c.2253T>C (p.Asn751=) rs2020913 0.02003
NM_000179.3(MSH6):c.1164C>T (p.His388=) rs55708305 0.01384
NM_000179.3(MSH6):c.2272C>T (p.Leu758=) rs56371757 0.01363
NM_000179.3(MSH6):c.3306T>A (p.Thr1102=) rs2020910 0.00869
NM_000179.3(MSH6):c.1186C>G (p.Leu396Val) rs2020908 0.00565
NM_000179.3(MSH6):c.2633T>C (p.Val878Ala) rs2020912 0.00448
NM_000179.3(MSH6):c.457+13A>G rs1800933 0.00434
NM_000179.3(MSH6):c.1345C>T (p.Leu449=) rs3136333 0.00429
NM_000179.3(MSH6):c.3911G>A (p.Arg1304Lys) rs34625968 0.00253
NM_000179.3(MSH6):c.3439-16C>T rs192614006 0.00237
NM_000179.3(MSH6):c.3801+17T>C rs3136365 0.00159
NM_000179.3(MSH6):c.431G>T (p.Ser144Ile) rs3211299 0.00158
NM_000179.3(MSH6):c.3647-6T>A rs182871847 0.00134
NM_000179.3(MSH6):c.984C>T (p.Ser328=) rs138143769 0.00101
NM_000179.3(MSH6):c.3265T>C (p.Leu1089=) rs34490141 0.00096
NM_000179.3(MSH6):c.1526T>C (p.Val509Ala) rs63751005 0.00067
NM_000179.3(MSH6):c.1665A>G (p.Ala555=) rs146785465 0.00066
NM_000179.3(MSH6):c.663A>C (p.Glu221Asp) rs41557217 0.00064
NM_000179.3(MSH6):c.1508C>G (p.Ser503Cys) rs63750897 0.00059
NM_000179.3(MSH6):c.1869C>T (p.Pro623=) rs141242295 0.00058
NM_000179.3(MSH6):c.3960A>G (p.Ala1320=) rs373425206 0.00042
NM_000179.3(MSH6):c.1449G>T (p.Val483=) rs35590297 0.00037
NM_000179.3(MSH6):c.3488A>T (p.Glu1163Val) rs63750252 0.00032
NM_000179.3(MSH6):c.3217C>T (p.Pro1073Ser) rs142254875 0.00028
NM_000179.3(MSH6):c.4002-10T>A rs545466048 0.00026
NM_000179.3(MSH6):c.3438+11_3438+14del rs377746844 0.00023
NM_000179.3(MSH6):c.3160A>T (p.Ile1054Phe) rs267608075 0.00016
NM_000179.3(MSH6):c.102C>A (p.Ala34=) rs201132087 0.00013
NM_000179.3(MSH6):c.1729C>T (p.Arg577Cys) rs542838372 0.00010
NM_000179.3(MSH6):c.1875C>T (p.Ser625=) rs63749886 0.00010
NM_000179.3(MSH6):c.335A>G (p.Asn112Ser) rs587779934 0.00010
NM_000179.3(MSH6):c.3172+20T>C rs3136335 0.00009
NM_000179.3(MSH6):c.3264C>T (p.Phe1088=) rs35621414 0.00008
NM_000179.3(MSH6):c.1162C>G (p.His388Asp) rs770386388 0.00006
NM_000179.3(MSH6):c.1498G>A (p.Ala500Thr) rs786204127 0.00006
NM_000179.3(MSH6):c.178T>C (p.Leu60=) rs35819209 0.00006
NM_000179.3(MSH6):c.1871G>A (p.Gly624Asp) rs763606858 0.00006
NM_000179.3(MSH6):c.197C>T (p.Pro66Leu) rs730881812 0.00006
NM_000179.3(MSH6):c.2724A>G (p.Glu908=) rs35389622 0.00006
NM_000179.3(MSH6):c.643G>A (p.Val215Ile) rs145959653 0.00006
NM_000179.3(MSH6):c.831A>C (p.Glu277Asp) rs374486449 0.00006
NM_000179.3(MSH6):c.16A>C (p.Thr6Pro) rs200944853 0.00005
NM_000179.3(MSH6):c.1844G>C (p.Cys615Ser) rs730881793 0.00005
NM_000179.3(MSH6):c.1661G>A (p.Arg554His) rs730881791 0.00004
NM_000179.3(MSH6):c.2408A>G (p.Asp803Gly) rs63751450 0.00004
NM_000179.3(MSH6):c.1043C>T (p.Ser348Phe) rs758432113 0.00003
NM_000179.3(MSH6):c.1049C>T (p.Ala350Val) rs587782331 0.00003
NM_000179.3(MSH6):c.1505T>C (p.Ile502Thr) rs749012012 0.00003
NM_000179.3(MSH6):c.1525G>C (p.Val509Leu) rs876660317 0.00003
NM_000179.3(MSH6):c.1696G>A (p.Gly566Arg) rs63749973 0.00003
NM_000179.3(MSH6):c.229C>T (p.Arg77Trp) rs745442468 0.00003
NM_000179.3(MSH6):c.2319C>T (p.Leu773=) rs63749895 0.00003
NM_000179.3(MSH6):c.3071G>A (p.Arg1024Gln) rs372705506 0.00003
NM_000179.3(MSH6):c.3303G>T (p.Lys1101Asn) rs370353868 0.00003
NM_000179.3(MSH6):c.3772C>G (p.Gln1258Glu) rs63750554 0.00003
NM_000179.3(MSH6):c.393A>C (p.Val131=) rs752488540 0.00003
NM_000179.3(MSH6):c.532C>T (p.Arg178Cys) rs730881813 0.00003
NM_000179.3(MSH6):c.719G>A (p.Arg240Gln) rs542848931 0.00003
NM_000179.3(MSH6):c.1082G>A (p.Arg361His) rs63750440 0.00002
NM_000179.3(MSH6):c.1493A>G (p.Lys498Arg) rs147136417 0.00002
NM_000179.3(MSH6):c.1501C>T (p.His501Tyr) rs779411998 0.00002
NM_000179.3(MSH6):c.2168G>C (p.Gly723Ala) rs759403696 0.00002
NM_000179.3(MSH6):c.2664G>C (p.Lys888Asn) rs730881798 0.00002
NM_000179.3(MSH6):c.2701C>A (p.Arg901Ser) rs772514245 0.00002
NM_000179.3(MSH6):c.3205G>C (p.Gly1069Arg) rs764113705 0.00002
NM_000179.3(MSH6):c.3220A>T (p.Met1074Leu) rs730881804 0.00002
NM_000179.3(MSH6):c.3244C>T (p.Pro1082Ser) rs186240214 0.00002
NM_000179.3(MSH6):c.373A>G (p.Lys125Glu) rs372352774 0.00002
NM_000179.3(MSH6):c.3801+4T>C rs758830540 0.00002
NM_000179.3(MSH6):c.4005A>C (p.Glu1335Asp) rs786204130 0.00002
NM_000179.3(MSH6):c.661G>A (p.Glu221Lys) rs757817018 0.00002
NM_000179.3(MSH6):c.728G>A (p.Arg243His) rs370157832 0.00002
NM_000179.3(MSH6):c.899G>A (p.Arg300Gln) rs55760494 0.00002
NM_000179.3(MSH6):c.1005T>C (p.Asn335=) rs767011067 0.00001
NM_000179.3(MSH6):c.1015G>C (p.Ala339Pro) rs772760681 0.00001
NM_000179.3(MSH6):c.1028C>T (p.Pro343Leu) rs548898238 0.00001
NM_000179.3(MSH6):c.1061G>T (p.Gly354Val) rs730881788 0.00001
NM_000179.3(MSH6):c.110C>T (p.Ala37Val) rs763104308 0.00001
NM_000179.3(MSH6):c.112C>T (p.Pro38Ser) rs764009461 0.00001
NM_000179.3(MSH6):c.1168G>A (p.Asp390Asn) rs147737737 0.00001
NM_000179.3(MSH6):c.1270G>C (p.Val424Leu) rs768299607 0.00001
NM_000179.3(MSH6):c.134G>C (p.Gly45Ala) rs1114167802 0.00001
NM_000179.3(MSH6):c.1660C>T (p.Arg554Cys) rs775716798 0.00001
NM_000179.3(MSH6):c.1701G>C (p.Lys567Asn) rs752435825 0.00001
NM_000179.3(MSH6):c.1708A>G (p.Ile570Val) rs61748081 0.00001
NM_000179.3(MSH6):c.1776A>T (p.Val592=) rs56132616 0.00001
NM_000179.3(MSH6):c.182C>T (p.Ala61Val) rs572336612 0.00001
NM_000179.3(MSH6):c.1912C>A (p.Leu638Ile) rs1303026707 0.00001
NM_000179.3(MSH6):c.1957G>A (p.Val653Met) rs768095444 0.00001
NM_000179.3(MSH6):c.1962G>A (p.Met654Ile) rs148592158 0.00001
NM_000179.3(MSH6):c.2111C>G (p.Ala704Gly) rs370237509 0.00001
NM_000179.3(MSH6):c.2159C>T (p.Thr720Ile) rs185531778 0.00001
NM_000179.3(MSH6):c.2165C>G (p.Ser722Cys) rs776198410 0.00001
NM_000179.3(MSH6):c.2180C>G (p.Thr727Ser) rs767861096 0.00001
NM_000179.3(MSH6):c.2189A>G (p.Tyr730Cys) rs587782900 0.00001
NM_000179.3(MSH6):c.2260A>C (p.Thr754Pro) rs545057945 0.00001
NM_000179.3(MSH6):c.2291C>A (p.Thr764Asn) rs561198849 0.00001
NM_000179.3(MSH6):c.2356T>C (p.Tyr786His) rs773193199 0.00001
NM_000179.3(MSH6):c.2419G>A (p.Glu807Lys) rs587779923 0.00001
NM_000179.3(MSH6):c.2600T>G (p.Val867Gly) rs139598980 0.00001
NM_000179.3(MSH6):c.2615T>C (p.Ile872Thr) rs1064793342 0.00001
NM_000179.3(MSH6):c.2673C>G (p.Ile891Met) rs146006741 0.00001
NM_000179.3(MSH6):c.2677C>G (p.Leu893Val) rs370754319 0.00001
NM_000179.3(MSH6):c.2949G>C (p.Glu983Asp) rs780485157 0.00001
NM_000179.3(MSH6):c.3215G>T (p.Gly1072Val) rs781243845 0.00001
NM_000179.3(MSH6):c.3233T>C (p.Val1078Ala) rs376452612 0.00001
NM_000179.3(MSH6):c.3312T>A (p.Phe1104Leu) rs747441460 0.00001
NM_000179.3(MSH6):c.333C>T (p.Tyr111=) rs786202772 0.00001
NM_000179.3(MSH6):c.3363G>C (p.Glu1121Asp) rs377226210 0.00001
NM_000179.3(MSH6):c.3383A>G (p.Tyr1128Cys) rs587779261 0.00001
NM_000179.3(MSH6):c.3675G>A (p.Thr1225=) rs730881820 0.00001
NM_000179.3(MSH6):c.3686A>G (p.Asn1229Ser) rs730881807 0.00001
NM_000179.3(MSH6):c.3809T>A (p.Met1270Lys) rs777617756 0.00001
NM_000179.3(MSH6):c.3819T>G (p.Asn1273Lys) rs759642651 0.00001
NM_000179.3(MSH6):c.3980A>G (p.Asn1327Ser) rs780187989 0.00001
NM_000179.3(MSH6):c.4068G>C (p.Leu1356Phe) rs192740549 0.00001
NM_000179.3(MSH6):c.487G>A (p.Gly163Ser) rs776065389 0.00001
NM_000179.3(MSH6):c.502G>C (p.Ala168Pro) rs1333393611 0.00001
NM_000179.3(MSH6):c.509C>G (p.Pro170Arg) rs985845102 0.00001
NM_000179.3(MSH6):c.533G>T (p.Arg178Leu) rs786204186 0.00001
NM_000179.3(MSH6):c.566A>T (p.Lys189Met) rs1060502889 0.00001
NM_000179.3(MSH6):c.5C>T (p.Ser2Leu) rs752887988 0.00001
NM_000179.3(MSH6):c.637A>C (p.Thr213Pro) rs876659071 0.00001
NM_000179.3(MSH6):c.644T>G (p.Val215Gly) rs587779946 0.00001
NM_000179.3(MSH6):c.659A>G (p.Glu220Gly) rs764478569 0.00001
NM_000179.3(MSH6):c.754T>G (p.Ser252Ala) rs746623981 0.00001
NM_000179.3(MSH6):c.776G>A (p.Gly259Asp) rs1404814811 0.00001
NM_000179.3(MSH6):c.792A>C (p.Glu264Asp) rs876661253 0.00001
NM_000179.3(MSH6):c.824G>C (p.Ser275Thr) rs774586054 0.00001
NM_000179.3(MSH6):c.869T>C (p.Leu290Pro) rs751309721 0.00001
NM_000179.3(MSH6):c.881T>G (p.Val294Gly) rs1482153450 0.00001
NM_000179.3(MSH6):c.944C>G (p.Ser315Cys) rs63750491 0.00001
NM_000179.3(MSH6):c.947G>A (p.Arg316Lys) rs562487553 0.00001
NM_000179.3(MSH6):c.979A>G (p.Thr327Ala) rs730881814 0.00001
MHS6:c.3647-65_3647-61del rs3136363
NM_000179.3(MSH6):c.102C>T (p.Ala34=) rs201132087
NM_000179.3(MSH6):c.1035T>A (p.Asn345Lys) rs765166082
NM_000179.3(MSH6):c.1037C>G (p.Ser346Cys) rs567785169
NM_000179.3(MSH6):c.106G>T (p.Ala36Ser) rs759589301
NM_000179.3(MSH6):c.1074C>G (p.Asp358Glu) rs760311819
NM_000179.3(MSH6):c.116G>C (p.Gly39Ala) rs1042821
NM_000179.3(MSH6):c.1170T>A (p.Asp390Glu) rs55882234
NM_000179.3(MSH6):c.118G>C (p.Ala40Pro) rs754231971
NM_000179.3(MSH6):c.119C>T (p.Ala40Val) rs757957751
NM_000179.3(MSH6):c.1413T>A (p.Asp471Glu)
NM_000179.3(MSH6):c.146C>T (p.Ala49Val) rs775498550
NM_000179.3(MSH6):c.14G>C (p.Ser5Thr)
NM_000179.3(MSH6):c.1621A>G (p.Ser541Gly) rs587779778
NM_000179.3(MSH6):c.1637A>G (p.Glu546Gly) rs373554374
NM_000179.3(MSH6):c.1844G>T (p.Cys615Phe) rs730881793
NM_000179.3(MSH6):c.1931G>C (p.Arg644Thr) rs1324616148
NM_000179.3(MSH6):c.2013G>A (p.Leu671=) rs765289515
NM_000179.3(MSH6):c.2409C>A (p.Asp803Glu)
NM_000179.3(MSH6):c.2667G>C (p.Gln889His)
NM_000179.3(MSH6):c.2720T>C (p.Val907Ala) rs201936512
NM_000179.3(MSH6):c.2732G>A (p.Arg911Gln) rs761622304
NM_000179.3(MSH6):c.2757A>C (p.Glu919Asp) rs866493167
NM_000179.3(MSH6):c.3151G>A (p.Val1051Ile) rs576269342
NM_000179.3(MSH6):c.3173-18T>A rs189672273
NM_000179.3(MSH6):c.3246G>A (p.Pro1082=) rs3136351
NM_000179.3(MSH6):c.3246G>C (p.Pro1082=) rs3136351
NM_000179.3(MSH6):c.3246G>T (p.Pro1082=) rs3136351
NM_000179.3(MSH6):c.3257C>A (p.Pro1086His) rs780345806
NM_000179.3(MSH6):c.3264C>G (p.Phe1088Leu) rs35621414
NM_000179.3(MSH6):c.3299C>T (p.Thr1100Met) rs63750442
NM_000179.3(MSH6):c.3354G>A (p.Glu1118=) rs35642130
NM_000179.3(MSH6):c.3384T>C (p.Tyr1128=) rs544518097
NM_000179.3(MSH6):c.3438+21dup
NM_000179.3(MSH6):c.3467T>A (p.Met1156Lys) rs876659549
NM_000179.3(MSH6):c.3556+11del
NM_000179.3(MSH6):c.3556+11dup rs754636132
NM_000179.3(MSH6):c.3646+91T>C rs3136359
NM_000179.3(MSH6):c.3647-11dup rs774223571
NM_000179.3(MSH6):c.3647-6T>C rs182871847
NM_000179.3(MSH6):c.3801+21dup rs747031075
NM_000179.3(MSH6):c.3802-11dup
NM_000179.3(MSH6):c.3843G>T (p.Glu1281Asp) rs864622384
NM_000179.3(MSH6):c.3977T>C (p.Met1326Thr) rs757089977
NM_000179.3(MSH6):c.3992G>A (p.Arg1331Gln) rs184131049
NM_000179.3(MSH6):c.3992G>T (p.Arg1331Leu) rs184131049
NM_000179.3(MSH6):c.4001+2TAAC[2] rs267608132
NM_000179.3(MSH6):c.4002-4dup rs1572749758
NM_000179.3(MSH6):c.4068_4071dup (p.Lys1358delinsAspTer) rs55740729
NM_000179.3(MSH6):c.43C>T (p.Pro15Ser) rs776745497
NM_000179.3(MSH6):c.457+32TG[9] rs397839804
NM_000179.3(MSH6):c.589G>C (p.Asp197His) rs148517241
NM_000179.3(MSH6):c.628-13C>G rs538280815
NM_000179.3(MSH6):c.628-17C>A rs369971640
NM_000179.3(MSH6):c.663A>T (p.Glu221Asp) rs41557217
NM_000179.3(MSH6):c.743G>C (p.Arg248Pro) rs764870249
NM_000179.3(MSH6):c.753A>G (p.Ile251Met) rs587779321
NM_000179.3(MSH6):c.806C>T (p.Thr269Ile) rs587779322
NM_000179.3(MSH6):c.905G>C (p.Arg302Thr) rs587781510
NM_000179.3(MSH6):c.968C>A (p.Thr323Asn) rs777890307
NM_000179.3(MSH6):c.988T>C (p.Ser330Pro) rs770408023

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