ClinVar Miner

List of variants in gene PLEC reported as likely benign by PreventionGenetics, part of Exact Sciences

Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 208
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HGVS dbSNP gnomAD frequency
NM_201384.3(PLEC):c.2740-45G>T rs11993782 0.22902
NM_201384.3(PLEC):c.3757-9A>G rs57461687 0.14687
NM_201384.3(PLEC):c.9777T>A (p.Ser3259=) rs34644439 0.09690
NM_201384.3(PLEC):c.9073G>A (p.Val3025Ile) rs35027700 0.07759
NM_201384.3(PLEC):c.4644G>A (p.Ala1548=) rs62642470 0.06519
NM_201384.3(PLEC):c.2658G>A (p.Leu886=) rs78012434 0.06211
NM_201384.3(PLEC):c.9101C>T (p.Ala3034Val) rs35858667 0.05256
NM_201384.3(PLEC):c.8025C>T (p.Gly2675=) rs35139934 0.05241
NM_201384.3(PLEC):c.11089C>T (p.Leu3697=) rs17062686 0.03808
NM_201384.3(PLEC):c.5229G>A (p.Ala1743=) rs140406501 0.02486
NM_201384.3(PLEC):c.1374C>T (p.Thr458=) rs115081018 0.01267
NM_201384.3(PLEC):c.2305-10del rs142120912 0.01228
NM_201384.3(PLEC):c.12360G>A (p.Pro4120=) rs146781600 0.00943
NM_201384.3(PLEC):c.8489A>G (p.Tyr2830Cys) rs199720608 0.00920
NM_201384.3(PLEC):c.1752C>T (p.Pro584=) rs185978075 0.00852
NM_201384.3(PLEC):c.3756+32G>A rs199878792 0.00659
NM_201384.3(PLEC):c.7267G>A (p.Ala2423Thr) rs193257576 0.00321
NM_201384.3(PLEC):c.6069C>G (p.Arg2023=) rs376365984 0.00218
NM_201384.3(PLEC):c.4873G>A (p.Glu1625Lys) rs187338487 0.00183
NM_201384.3(PLEC):c.1042-4A>G rs112966803 0.00171
NM_201384.3(PLEC):c.11443G>C (p.Gly3815Arg) rs200927137 0.00168
NM_201384.3(PLEC):c.5493G>A (p.Ala1831=) rs201218437 0.00168
NM_201384.3(PLEC):c.2551G>A (p.Val851Met) rs200647397 0.00164
NM_201384.3(PLEC):c.9558A>G (p.Thr3186=) rs201102719 0.00161
NM_201384.3(PLEC):c.10497C>T (p.Asn3499=) rs113113366 0.00160
NM_201384.3(PLEC):c.1955C>T (p.Thr652Ile) rs190470017 0.00158
NM_201384.3(PLEC):c.6198G>T (p.Gln2066His) rs201574539 0.00155
NM_201384.3(PLEC):c.12817C>T (p.Pro4273Ser) rs202040785 0.00146
NM_201384.3(PLEC):c.8509G>A (p.Glu2837Lys) rs199661077 0.00146
NM_201384.3(PLEC):c.8660A>G (p.Lys2887Arg) rs201655861 0.00141
NM_201384.3(PLEC):c.11524G>A (p.Glu3842Lys) rs187011732 0.00132
NM_201384.3(PLEC):c.12876G>A (p.Val4292=) rs199509259 0.00129
NM_201384.3(PLEC):c.9034G>A (p.Glu3012Lys) rs200898220 0.00123
NM_201384.3(PLEC):c.8201C>T (p.Ala2734Val) rs200202579 0.00118
NM_201384.3(PLEC):c.12628G>A (p.Ala4210Thr) rs199941693 0.00114
NM_201384.3(PLEC):c.5391C>T (p.Arg1797=) rs551187778 0.00110
NM_201384.3(PLEC):c.6438G>A (p.Ala2146=) rs374211586 0.00108
NM_201384.3(PLEC):c.3070G>A (p.Ala1024Thr) rs376665854 0.00107
NM_201384.3(PLEC):c.10656G>A (p.Val3552=) rs368312695 0.00091
NM_201384.3(PLEC):c.3434C>T (p.Thr1145Met) rs200672373 0.00089
NM_201384.3(PLEC):c.2508G>A (p.Pro836=) rs116385960 0.00086
NM_201384.3(PLEC):c.8182A>G (p.Ile2728Val) rs200061415 0.00076
NM_201384.3(PLEC):c.2642C>T (p.Thr881Met) rs200611519 0.00073
NM_201384.3(PLEC):c.1158C>G (p.Ser386Arg) rs201667254 0.00072
NM_201384.3(PLEC):c.6536G>A (p.Arg2179Gln) rs117962829 0.00064
NM_201384.3(PLEC):c.7951C>T (p.Arg2651Trp) rs145977158 0.00062
NM_201384.3(PLEC):c.13509C>T (p.Arg4503=) rs190789703 0.00056
NM_201384.3(PLEC):c.11594G>A (p.Arg3865His) rs200722246 0.00055
NM_201378.4(PLEC):c.71-11866G>A rs199505812 0.00054
NM_201384.3(PLEC):c.5521G>A (p.Ala1841Thr) rs201657125 0.00052
NM_201384.3(PLEC):c.13182C>T (p.Thr4394=) rs373958891 0.00049
NM_201384.3(PLEC):c.8496C>T (p.Arg2832=) rs369013440 0.00048
NM_201384.3(PLEC):c.963C>T (p.Phe321=) rs368425406 0.00048
NM_201384.3(PLEC):c.921C>T (p.Phe307=) rs546380802 0.00047
NM_201384.3(PLEC):c.5874G>A (p.Thr1958=) rs185082202 0.00046
NM_201384.3(PLEC):c.8046C>T (p.Leu2682=) rs375590561 0.00046
NM_201384.3(PLEC):c.6099G>A (p.Ala2033=) rs375465011 0.00044
NM_201384.3(PLEC):c.2703C>T (p.Arg901=) rs201130558 0.00042
NM_201384.3(PLEC):c.7992G>A (p.Leu2664=) rs202097976 0.00041
NM_201384.3(PLEC):c.8871G>A (p.Lys2957=) rs368326361 0.00036
NM_201384.3(PLEC):c.8442C>T (p.Gly2814=) rs186703073 0.00034
NM_201384.3(PLEC):c.7584G>A (p.Gln2528=) rs372858742 0.00033
NM_201384.3(PLEC):c.10105G>T (p.Val3369Leu) rs201373953 0.00032
NM_201384.3(PLEC):c.6495G>A (p.Ala2165=) rs201462310 0.00032
NM_201384.3(PLEC):c.2536G>A (p.Gly846Ser) rs189233521 0.00031
NM_201384.3(PLEC):c.8439C>T (p.Gly2813=) rs201932982 0.00031
NM_201384.3(PLEC):c.4521C>T (p.Ser1507=) rs372986812 0.00030
NM_201384.3(PLEC):c.3831C>T (p.Asn1277=) rs202217053 0.00029
NM_201384.3(PLEC):c.6062C>T (p.Ala2021Val) rs367715805 0.00029
NM_201384.3(PLEC):c.12475C>T (p.Arg4159Cys) rs201069314 0.00026
NM_201384.3(PLEC):c.12781G>A (p.Ala4261Thr) rs200924154 0.00026
NM_201384.3(PLEC):c.252G>A (p.Ser84=) rs570408268 0.00026
NM_201384.3(PLEC):c.7339C>T (p.Arg2447Cys) rs781936848 0.00024
NM_201384.3(PLEC):c.5286C>T (p.Ala1762=) rs533922847 0.00022
NM_201384.3(PLEC):c.11634G>A (p.Ser3878=) rs375097273 0.00021
NM_201384.3(PLEC):c.4101C>T (p.Ala1367=) rs376065732 0.00021
NM_201384.3(PLEC):c.5460C>T (p.Ala1820=) rs782259899 0.00021
NM_201384.3(PLEC):c.7686C>T (p.Ala2562=) rs534269714 0.00021
NM_201384.3(PLEC):c.2785C>T (p.Leu929=) rs369676162 0.00020
NM_201384.3(PLEC):c.10521C>T (p.Asp3507=) rs201905804 0.00017
NM_201384.3(PLEC):c.6492C>T (p.Asp2164=) rs575031901 0.00017
NM_201384.3(PLEC):c.9027C>T (p.Asp3009=) rs782802729 0.00017
NM_201384.3(PLEC):c.12444G>A (p.Thr4148=) rs143548638 0.00016
NM_201384.3(PLEC):c.2304+5G>A rs781783346 0.00016
NM_201384.3(PLEC):c.2535C>T (p.Ser845=) rs199721954 0.00016
NM_201384.3(PLEC):c.2739G>A (p.Thr913=) rs200436731 0.00016
NM_201384.3(PLEC):c.9692G>A (p.Arg3231His) rs377610697 0.00016
NM_201384.3(PLEC):c.10380C>T (p.His3460=) rs371407635 0.00015
NM_201384.3(PLEC):c.10417G>A (p.Gly3473Ser) rs201765507 0.00015
NM_201384.3(PLEC):c.11476C>T (p.Arg3826Cys) rs781836500 0.00014
NM_201384.3(PLEC):c.1283C>T (p.Ala428Val) rs200893203 0.00014
NM_201384.3(PLEC):c.1305G>A (p.Ala435=) rs369877618 0.00014
NM_201384.3(PLEC):c.3286C>T (p.Arg1096Cys) rs533410461 0.00014
NM_201384.3(PLEC):c.4587C>T (p.Arg1529=) rs369723574 0.00014
NM_201384.3(PLEC):c.5443C>T (p.Arg1815Trp) rs398123400 0.00014
NM_201384.3(PLEC):c.6424G>A (p.Ala2142Thr) rs370942881 0.00014
NM_201384.3(PLEC):c.8727C>T (p.Thr2909=) rs370129235 0.00014
NM_201384.3(PLEC):c.6096G>C (p.Ser2032=) rs564245730 0.00013
NM_201384.3(PLEC):c.897G>A (p.Thr299=) rs377035835 0.00013
NM_201384.3(PLEC):c.10731C>T (p.Gly3577=) rs782672000 0.00012
NM_201384.3(PLEC):c.13470C>T (p.Arg4490=) rs531535217 0.00012
NM_201384.3(PLEC):c.6510T>C (p.His2170=) rs375106164 0.00012
NM_201384.3(PLEC):c.11301G>A (p.Ala3767=) rs374839579 0.00011
NM_201384.3(PLEC):c.2064G>A (p.Pro688=) rs374590279 0.00011
NM_201384.3(PLEC):c.10791C>T (p.Pro3597=) rs537994918 0.00010
NM_201384.3(PLEC):c.12141C>T (p.Ile4047=) rs782237359 0.00010
NM_201384.3(PLEC):c.12390G>A (p.Thr4130=) rs200575172 0.00010
NM_201384.3(PLEC):c.4998G>A (p.Lys1666=) rs763651946 0.00010
NM_201384.3(PLEC):c.113-6C>T rs782235036 0.00009
NM_201384.3(PLEC):c.11307C>T (p.Thr3769=) rs563846739 0.00009
NM_201384.3(PLEC):c.12720C>T (p.Ala4240=) rs377625103 0.00009
NM_201384.3(PLEC):c.12783C>T (p.Ala4261=) rs377524932 0.00009
NM_201384.3(PLEC):c.2874C>T (p.Tyr958=) rs368371693 0.00009
NM_201384.3(PLEC):c.12465C>T (p.Tyr4155=) rs773080070 0.00008
NM_201384.3(PLEC):c.2829G>A (p.Ala943=) rs369370495 0.00008
NM_201384.3(PLEC):c.342+7C>T rs367808541 0.00008
NM_201384.3(PLEC):c.4410G>A (p.Gly1470=) rs782222671 0.00008
NM_201384.3(PLEC):c.5469C>T (p.Asp1823=) rs771101893 0.00008
NM_201384.3(PLEC):c.2978G>A (p.Arg993Gln) rs534045685 0.00007
NM_201384.3(PLEC):c.5037G>A (p.Ala1679=) rs782627006 0.00007
NM_201384.3(PLEC):c.11721G>A (p.Thr3907=) rs371520192 0.00006
NM_201384.3(PLEC):c.12558G>A (p.Ser4186=) rs370789200 0.00006
NM_201384.3(PLEC):c.13401C>T (p.Ala4467=) rs782114678 0.00006
NM_201384.3(PLEC):c.3660C>T (p.Gly1220=) rs782205457 0.00006
NM_201384.3(PLEC):c.4293G>A (p.Ala1431=) rs782198489 0.00006
NM_201384.3(PLEC):c.4839G>A (p.Arg1613=) rs554561043 0.00006
NM_201384.3(PLEC):c.6522C>T (p.Ala2174=) rs369028979 0.00006
NM_201384.3(PLEC):c.7029G>A (p.Ala2343=) rs559198172 0.00006
NM_201384.3(PLEC):c.8475C>T (p.Pro2825=) rs374602421 0.00006
NM_201384.3(PLEC):c.12429C>T (p.Ile4143=) rs373975624 0.00005
NM_201384.3(PLEC):c.3873G>A (p.Ala1291=) rs374669316 0.00005
NM_201384.3(PLEC):c.4674G>A (p.Glu1558=) rs782298790 0.00005
NM_201384.3(PLEC):c.5562C>T (p.Ile1854=) rs782000075 0.00005
NM_201384.3(PLEC):c.10020C>T (p.Asp3340=) rs371577313 0.00004
NM_201384.3(PLEC):c.10944G>A (p.Thr3648=) rs201659441 0.00004
NM_201384.3(PLEC):c.11421C>T (p.Gly3807=) rs782144786 0.00004
NM_201384.3(PLEC):c.12885C>T (p.Thr4295=) rs782708582 0.00004
NM_201384.3(PLEC):c.12978C>T (p.Thr4326=) rs781832846 0.00004
NM_201384.3(PLEC):c.13443C>T (p.Ser4481=) rs201825355 0.00004
NM_201384.3(PLEC):c.13596C>T (p.Ala4532=) rs781917029 0.00004
NM_201384.3(PLEC):c.2613-8C>T rs376936955 0.00004
NM_201384.3(PLEC):c.3009C>T (p.Thr1003=) rs376276993 0.00004
NM_201384.3(PLEC):c.6204G>A (p.Thr2068=) rs979599396 0.00004
NM_201384.3(PLEC):c.6343G>A (p.Glu2115Lys) rs782713908 0.00004
NM_201384.3(PLEC):c.11610C>T (p.Thr3870=) rs781944689 0.00003
NM_201384.3(PLEC):c.11952G>A (p.Lys3984=) rs371941789 0.00003
NM_201384.3(PLEC):c.13263C>T (p.Thr4421=) rs369202116 0.00003
NM_201384.3(PLEC):c.13575G>A (p.Ser4525=) rs549882307 0.00003
NM_201384.3(PLEC):c.1548G>A (p.Glu516=) rs782107195 0.00003
NM_201384.3(PLEC):c.3955C>T (p.Leu1319=) rs201416081 0.00003
NM_201384.3(PLEC):c.4869G>A (p.Ala1623=) rs782246479 0.00003
NM_201384.3(PLEC):c.678G>A (p.Ala226=) rs782369854 0.00003
NM_201384.3(PLEC):c.2547C>T (p.Ala849=) rs770364460 0.00002
NM_201384.3(PLEC):c.3787G>A (p.Glu1263Lys) rs377125427 0.00002
NM_201384.3(PLEC):c.394C>T (p.Leu132=) rs372380314 0.00002
NM_201384.3(PLEC):c.7170C>T (p.Ala2390=) rs142185486 0.00002
NM_201378.4(PLEC):c.15G>T (p.Leu5=) rs1439509657 0.00001
NM_201384.3(PLEC):c.10830C>T (p.Ala3610=) rs80304210 0.00001
NM_201384.3(PLEC):c.1173G>A (p.Leu391=) rs1554720259 0.00001
NM_201384.3(PLEC):c.11751C>T (p.Ser3917=) rs782402718 0.00001
NM_201384.3(PLEC):c.12354C>T (p.Leu4118=) rs782692436 0.00001
NM_201384.3(PLEC):c.3081+9C>T rs371983298 0.00001
NM_201384.3(PLEC):c.3357G>A (p.Pro1119=) rs782451360 0.00001
NM_201384.3(PLEC):c.4683G>A (p.Arg1561=) rs782728438 0.00001
NM_201384.3(PLEC):c.5217G>A (p.Leu1739=) rs934111999 0.00001
NM_201384.3(PLEC):c.6000C>T (p.Ala2000=) rs782459978 0.00001
NM_201384.3(PLEC):c.8013G>C (p.Arg2671=) rs782771150 0.00001
NM_201384.3(PLEC):c.9130C>T (p.Leu3044=) rs782038680 0.00001
NM_201378.4(PLEC):c.71-11616G>A
NM_201378.4(PLEC):c.71-11815G>A
NM_201378.4(PLEC):c.71-5077G>A
NM_201378.4(PLEC):c.71-5083A>C
NM_201378.4(PLEC):c.71-5203C>T
NM_201378.4(PLEC):c.71-5980C>T
NM_201384.3(PLEC):c.1002C>T (p.Ala334=) rs370574829
NM_201384.3(PLEC):c.10296C>A (p.Ala3432=) rs201848957
NM_201384.3(PLEC):c.10320C>T (p.Tyr3440=)
NM_201384.3(PLEC):c.10707G>A (p.Glu3569=)
NM_201384.3(PLEC):c.11193C>T (p.Gly3731=)
NM_201384.3(PLEC):c.11265C>T (p.Pro3755=)
NM_201384.3(PLEC):c.1191C>A (p.Ile397=) rs781888321
NM_201384.3(PLEC):c.11964G>A (p.Glu3988=)
NM_201384.3(PLEC):c.12243C>T (p.Thr4081=) rs185022156
NM_201384.3(PLEC):c.12426C>G (p.Val4142=)
NM_201384.3(PLEC):c.13347G>A (p.Ala4449=) rs368660987
NM_201384.3(PLEC):c.1418+10G>C rs782571969
NM_201384.3(PLEC):c.1908G>A (p.Glu636=)
NM_201384.3(PLEC):c.1980G>T (p.Ala660=)
NM_201384.3(PLEC):c.2178+9C>T rs114256617
NM_201384.3(PLEC):c.4056G>A (p.Glu1352=)
NM_201384.3(PLEC):c.447C>T (p.Ile149=)
NM_201384.3(PLEC):c.489G>A (p.Lys163=)
NM_201384.3(PLEC):c.5238C>T (p.Ala1746=)
NM_201384.3(PLEC):c.5457G>A (p.Leu1819=)
NM_201384.3(PLEC):c.5582C>T (p.Ala1861Val) rs200949161
NM_201384.3(PLEC):c.576C>T (p.Leu192=)
NM_201384.3(PLEC):c.5922G>C (p.Gln1974His) rs202190540
NM_201384.3(PLEC):c.6012G>C (p.Arg2004=)
NM_201384.3(PLEC):c.6531G>A (p.Thr2177=) rs782621816
NM_201384.3(PLEC):c.729C>T (p.Val243=) rs573371265
NM_201384.3(PLEC):c.771G>A (p.Ser257=)
NM_201384.3(PLEC):c.7803G>C (p.Leu2601=)
NM_201384.3(PLEC):c.7830G>A (p.Ala2610=) rs376112916
NM_201384.3(PLEC):c.8142C>T (p.Ala2714=)
NM_201384.3(PLEC):c.8506G>A (p.Asp2836Asn) rs200814155
NM_201384.3(PLEC):c.9078C>T (p.Ile3026=) rs201586456
NM_201384.3(PLEC):c.9081G>A (p.Ala3027=) rs199758196
NM_201384.3(PLEC):c.9615C>T (p.Thr3205=)

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