ClinVar Miner

List of variants in gene PLEC reported as benign by GeneDx

Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 185
Download table as spreadsheet
HGVS dbSNP gnomAD frequency
NM_201384.3(PLEC):c.2457+6C>T rs11780911 0.66214
NM_201384.3(PLEC):c.11886A>G (p.Thr3962=) rs6558406 0.55590
NM_201384.3(PLEC):c.12813A>G (p.Ser4271=) rs6558405 0.54173
NM_201384.3(PLEC):c.13461T>C (p.Ala4487=) rs7014582 0.54076
NM_201384.3(PLEC):c.11628A>G (p.Pro3876=) rs7822511 0.53938
NM_201384.3(PLEC):c.7960T>C (p.Ser2654Pro) rs7833924 0.53335
NM_201384.3(PLEC):c.3965A>G (p.His1322Arg) rs55895668 0.53310
NM_201384.3(PLEC):c.3261-123T>C rs11993233 0.53296
NM_201384.3(PLEC):c.11127T>C (p.Ala3709=) rs7819099 0.50384
NM_201384.3(PLEC):c.1264-15G>A rs7003580 0.45916
NM_201384.3(PLEC):c.603-112T>G rs6983908 0.44104
NM_201384.3(PLEC):c.2305-240A>G rs10107388 0.44008
NM_201384.3(PLEC):c.1815+13A>G rs10866916 0.39200
NM_201384.3(PLEC):c.436-123T>C rs6988767 0.37247
NM_201384.3(PLEC):c.264+113C>T rs13439519 0.36937
NM_201384.3(PLEC):c.112+203C>A rs11784501 0.30817
NM_201384.3(PLEC):c.*10C>T rs1065837 0.30524
NM_201384.3(PLEC):c.4413T>C (p.Ala1471=) rs35916068 0.30160
NM_201384.3(PLEC):c.112+173G>A rs11136339 0.30000
NM_201384.3(PLEC):c.4045-269G>A rs6993953 0.29994
NM_201384.3(PLEC):c.5907T>C (p.Ala1969=) rs2857829 0.29968
NM_201384.3(PLEC):c.4045-4A>G rs7002152 0.29962
NM_201384.3(PLEC):c.8495G>A (p.Arg2832His) rs6558407 0.29956
NM_201384.3(PLEC):c.3757-6A>G rs11136333 0.29944
NM_201384.3(PLEC):c.6441G>A (p.Ala2147=) rs7016416 0.29943
NM_201384.3(PLEC):c.3550T>C (p.Leu1184=) rs3135109 0.29936
NM_201384.3(PLEC):c.4045-169C>T rs7016860 0.29930
NM_201384.3(PLEC):c.3841-62A>G rs55812715 0.29925
NM_201384.3(PLEC):c.4044+212C>T rs7017644 0.29925
NM_201384.3(PLEC):c.3840+48A>G rs11782890 0.29923
NM_201384.3(PLEC):c.3746G>A (p.Arg1249Gln) rs11136334 0.29922
NM_201384.3(PLEC):c.4680G>A (p.Ala1560=) rs55836855 0.29922
NM_201384.3(PLEC):c.4044+54T>C rs56401829 0.29919
NM_201384.3(PLEC):c.4044+143C>T rs7017789 0.29912
NM_201384.3(PLEC):c.7581A>C (p.Ala2527=) rs11778026 0.29910
NM_201384.3(PLEC):c.6170C>T (p.Ala2057Val) rs7002002 0.29901
NM_201384.3(PLEC):c.7426-35C>T rs11786903 0.29882
NM_201384.3(PLEC):c.8253C>T (p.Asn2751=) rs11777402 0.29844
NM_201384.3(PLEC):c.4455T>G (p.Ala1485=) rs56117011 0.29823
NM_201384.3(PLEC):c.5928G>A (p.Ala1976=) rs1140522 0.29794
NM_201384.3(PLEC):c.10665G>A (p.Thr3555=) rs6984820 0.29792
NM_201384.3(PLEC):c.7425+37C>T rs11786934 0.29669
NM_201384.3(PLEC):c.3841-51A>T rs55984967 0.29657
NM_201384.3(PLEC):c.1095T>C (p.Asp365=) rs11783799 0.29245
NM_201384.3(PLEC):c.175-58T>C rs11136338 0.29218
NM_201384.3(PLEC):c.1169+43T>A rs11783772 0.29193
NM_201384.3(PLEC):c.1042-93G>A rs11782433 0.29178
NM_201384.3(PLEC):c.4476G>A (p.Ala1492=) rs55646585 0.29155
NM_201384.3(PLEC):c.1511C>T (p.Ala504Val) rs11136336 0.29153
NM_201384.3(PLEC):c.603-129T>C rs11784762 0.29016
NM_201384.3(PLEC):c.2923+37C>T rs11136335 0.28946
NM_201378.4(PLEC):c.71-12438G>A rs73715570 0.25628
NM_201384.3(PLEC):c.2740-45G>T rs11993782 0.22902
NM_201384.3(PLEC):c.174+50C>T rs7844225 0.16256
NM_201384.3(PLEC):c.3841-18C>T rs62522552 0.14837
NM_201384.3(PLEC):c.3757-9A>G rs57461687 0.14687
NM_201384.3(PLEC):c.2304+252A>G rs62522556 0.13603
NM_201384.3(PLEC):c.9777T>A (p.Ser3259=) rs34644439 0.09690
NM_201384.3(PLEC):c.3261-13G>A rs11991798 0.08644
NM_201384.3(PLEC):c.12561C>T (p.Asp4187=) rs11998271 0.08588
NM_201384.3(PLEC):c.436-163A>G rs58905421 0.08480
NM_201378.4(PLEC):c.71-6217G>T rs73377226 0.07940
NM_201384.3(PLEC):c.9073G>A (p.Val3025Ile) rs35027700 0.07759
NM_201384.3(PLEC):c.8820C>G (p.Asp2940Glu) rs58308209 0.07595
NM_201384.3(PLEC):c.3378G>A (p.Glu1126=) rs11991764 0.07344
NM_201384.3(PLEC):c.10920C>T (p.Tyr3640=) rs28455570 0.07092
NM_201384.3(PLEC):c.2304+261A>G rs73715561 0.06691
NM_201384.3(PLEC):c.4644G>A (p.Ala1548=) rs62642470 0.06519
NM_201384.3(PLEC):c.3841-57C>T rs113473982 0.06349
NM_201384.3(PLEC):c.2658G>A (p.Leu886=) rs78012434 0.06211
NM_201384.3(PLEC):c.8319C>T (p.Ala2773=) rs34534853 0.05909
NM_201384.3(PLEC):c.265-16C>G rs11993492 0.05821
NM_201384.3(PLEC):c.7726C>T (p.Leu2576=) rs11988293 0.05812
NM_201384.3(PLEC):c.5865G>A (p.Ala1955=) rs62642469 0.05798
NM_201384.3(PLEC):c.7878G>A (p.Leu2626=) rs34803322 0.05741
NM_201384.3(PLEC):c.9101C>T (p.Ala3034Val) rs35858667 0.05256
NM_201384.3(PLEC):c.8025C>T (p.Gly2675=) rs35139934 0.05241
NC_000008.11:g.143976946G>T rs147261064 0.05192
NM_201384.3(PLEC):c.1418+40C>T rs115492306 0.05072
NM_201384.3(PLEC):c.2613-7C>A rs11990994 0.04852
NM_201378.4(PLEC):c.71-15012C>G rs61467040 0.04822
NM_201384.3(PLEC):c.3717C>T (p.Ala1239=) rs112173070 0.04668
NM_201384.3(PLEC):c.11601C>T (p.Asp3867=) rs75833626 0.04561
NM_201384.3(PLEC):c.*19C>T rs11997227 0.04358
NM_201384.3(PLEC):c.436-153G>A rs58958846 0.04308
NM_201384.3(PLEC):c.10014C>T (p.Val3338=) rs35775257 0.04275
NM_201384.3(PLEC):c.5583G>A (p.Ala1861=) rs75586449 0.03960
NM_201384.3(PLEC):c.602+130C>T rs73377218 0.03928
NM_201378.4(PLEC):c.71-11263A>C rs114353607 0.03836
NM_201384.3(PLEC):c.11089C>T (p.Leu3697=) rs17062686 0.03808
NM_201384.3(PLEC):c.718+10C>T rs12545876 0.03717
NM_201384.3(PLEC):c.11599G>C (p.Asp3867His) rs62642465 0.03714
NM_201384.3(PLEC):c.6314C>T (p.Ala2105Val) rs74772299 0.03697
NM_201384.3(PLEC):c.11913G>A (p.Ala3971=) rs73715559 0.03658
NM_201384.3(PLEC):c.2548G>A (p.Ala850Thr) rs58836306 0.03656
NM_201384.3(PLEC):c.4044+62A>G rs139985577 0.03320
NM_201378.4(PLEC):c.71-6355_71-6331dup rs376036353 0.02666
NM_201384.3(PLEC):c.5229G>A (p.Ala1743=) rs140406501 0.02486
NM_201384.3(PLEC):c.10046C>T (p.Thr3349Met) rs34725742 0.02357
NM_201384.3(PLEC):c.5316G>A (p.Ala1772=) rs62642466 0.02329
NM_201378.4(PLEC):c.70+278G>A rs113825975 0.02253
NM_201384.3(PLEC):c.8050C>T (p.Arg2684Trp) rs35723243 0.02185
NM_201384.3(PLEC):c.436-141C>T rs114878132 0.02004
NM_201384.3(PLEC):c.342+13G>A rs115664009 0.01917
NM_201384.3(PLEC):c.9945C>T (p.Ser3315=) rs28657061 0.01636
NM_201384.3(PLEC):c.6741C>T (p.Ile2247=) rs62641755 0.01627
NM_000445.5(PLEC):c.-7+15G>T rs28364664 0.01596
NM_201384.3(PLEC):c.1706G>A (p.Arg569Gln) rs3135103 0.01472
NM_201384.3(PLEC):c.13205C>T (p.Thr4402Met) rs113513807 0.01455
NM_201384.3(PLEC):c.8012G>A (p.Arg2671Gln) rs28526657 0.01433
NM_201384.3(PLEC):c.4557G>A (p.Ser1519=) rs79705634 0.01389
NM_201384.3(PLEC):c.6577C>T (p.Leu2193=) rs28610521 0.01376
NM_201384.3(PLEC):c.7110C>T (p.Ala2370=) rs80143277 0.01298
NM_201384.3(PLEC):c.2217G>A (p.Gln739=) rs116612406 0.01288
NM_201384.3(PLEC):c.1374C>T (p.Thr458=) rs115081018 0.01267
NM_201384.3(PLEC):c.2305-10del rs142120912 0.01228
NM_201384.3(PLEC):c.7266C>T (p.Leu2422=) rs117306121 0.01118
NM_201384.3(PLEC):c.3192C>T (p.Arg1064=) rs73377210 0.01114
NM_201384.3(PLEC):c.5477G>A (p.Arg1826Gln) rs147838690 0.01083
NM_201384.3(PLEC):c.10058G>C (p.Gly3353Ala) rs35261863 0.01065
NM_201384.3(PLEC):c.10986C>T (p.Thr3662=) rs35134741 0.00977
NM_201384.3(PLEC):c.2832C>T (p.Gly944=) rs145050858 0.00969
NM_201384.3(PLEC):c.12360G>A (p.Pro4120=) rs146781600 0.00943
NM_201384.3(PLEC):c.887G>A (p.Arg296Gln) rs138924815 0.00931
NM_201384.3(PLEC):c.8489A>G (p.Tyr2830Cys) rs199720608 0.00920
NM_201384.3(PLEC):c.1752C>T (p.Pro584=) rs185978075 0.00852
NM_201384.3(PLEC):c.11720C>T (p.Thr3907Met) rs78461695 0.00787
NM_201384.3(PLEC):c.4635G>A (p.Ala1545=) rs76426116 0.00714
NM_201384.3(PLEC):c.9435C>T (p.Asp3145=) rs60091617 0.00708
NM_201384.3(PLEC):c.11940C>T (p.Ile3980=) rs148865812 0.00674
NM_201384.3(PLEC):c.9966C>T (p.Val3322=) rs35613096 0.00651
NM_201384.3(PLEC):c.4223C>T (p.Ala1408Val) rs111851716 0.00648
NM_201384.3(PLEC):c.13110C>T (p.Ala4370=) rs187810163 0.00617
NM_201384.3(PLEC):c.2961C>T (p.Ser987=) rs149932255 0.00603
NM_201384.3(PLEC):c.4854C>T (p.Ala1618=) rs7011480 0.00578
NM_201384.3(PLEC):c.9961G>A (p.Gly3321Arg) rs34132016 0.00569
NM_201384.3(PLEC):c.175-6C>T rs377389860 0.00541
NM_201384.3(PLEC):c.3869A>G (p.Lys1290Arg) rs200895043 0.00541
NM_201384.3(PLEC):c.3351C>T (p.Ala1117=) rs145376880 0.00513
NM_201384.3(PLEC):c.1629G>T (p.Glu543Asp) rs201164522 0.00508
NM_000445.5(PLEC):c.26G>A (p.Arg9Gln) rs138978753 0.00470
NM_201384.3(PLEC):c.13248G>A (p.Thr4416=) rs115621402 0.00455
NM_201384.3(PLEC):c.9423C>T (p.Gly3141=) rs61529674 0.00421
NM_201384.3(PLEC):c.13402G>A (p.Ala4468Thr) rs112322162 0.00409
NM_201384.3(PLEC):c.7074G>A (p.Ala2358=) rs146381488 0.00404
NM_201384.3(PLEC):c.3682C>T (p.Arg1228Trp) rs144610086 0.00403
NM_201384.3(PLEC):c.5304G>A (p.Leu1768=) rs186670912 0.00400
NM_201384.3(PLEC):c.10338C>T (p.Ser3446=) rs62642461 0.00361
NM_201384.3(PLEC):c.5476C>T (p.Arg1826Trp) rs200575795 0.00326
NM_201384.3(PLEC):c.5653G>A (p.Ala1885Thr) rs201070741 0.00200
NM_201384.3(PLEC):c.9408C>T (p.Ala3136=) rs77006429 0.00138
NM_201384.3(PLEC):c.12784G>A (p.Val4262Ile) rs142946078 0.00117
NM_201384.3(PLEC):c.6311C>T (p.Ala2104Val) rs201959200 0.00081
NM_201384.3(PLEC):c.11208G>A (p.Pro3736=) rs200273549 0.00069
NM_201384.3(PLEC):c.4162C>T (p.Arg1388Trp) rs188305538 0.00057
NM_201384.3(PLEC):c.3756+13C>T rs201040617 0.00023
NM_201384.3(PLEC):c.1815+10G>A rs398123396 0.00010
NM_201384.3(PLEC):c.6059A>C (p.Glu2020Ala) rs367662560 0.00006
NM_201384.3(PLEC):c.4083G>A (p.Arg1361=) rs377619355 0.00003
NM_201384.3(PLEC):c.174+113C>T rs1326708539 0.00002
NM_201384.3(PLEC):c.12549C>T (p.Ile4183=) rs199512865 0.00001
NM_000445.5(PLEC):c.-7+77C>G rs182072333
NM_201384.3(PLEC):c.1042-83G>T rs1554720952
NM_201384.3(PLEC):c.10612T>C (p.Leu3538=) rs6992333
NM_201384.3(PLEC):c.113-311dup rs143293850
NM_201384.3(PLEC):c.1170-15G>A rs1554720283
NM_201384.3(PLEC):c.1737+13G>A rs2131931075
NM_201384.3(PLEC):c.174+22G>A rs7823393
NM_201384.3(PLEC):c.174+22G>C rs7823393
NM_201384.3(PLEC):c.2083-40GGGGC[4] rs58737991
NM_201384.3(PLEC):c.2178+9C>G rs114256617
NM_201384.3(PLEC):c.2304+6G>A rs1272203515
NM_201384.3(PLEC):c.2304+9dup rs35671527
NM_201384.3(PLEC):c.3400-42G>A rs114047247
NM_201384.3(PLEC):c.3400-6C>T rs2131617691
NM_201384.3(PLEC):c.3757-18G>A rs2131595276
NM_201384.3(PLEC):c.378T>C (p.Ala126=) rs6993938
NM_201384.3(PLEC):c.3946-4A>G rs1825379232
NM_201384.3(PLEC):c.4044+37C>T rs2131563341
NM_201384.3(PLEC):c.4045-35C>T rs1824993143
NM_201384.3(PLEC):c.436-298C>T rs78619470
NM_201384.3(PLEC):c.602+10C>T rs2132117578
NM_201384.3(PLEC):c.826-33C>G rs549239432
NM_201384.3(PLEC):c.8430C>G (p.Ile2810Met) rs62641758
NM_201384.3(PLEC):c.946-33C>G rs6994460

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.