ClinVar Miner

List of variants in gene PRDM16 reported as likely benign by GeneDx

Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 178
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HGVS dbSNP gnomAD frequency
NM_022114.4(PRDM16):c.2940-301A>G rs183192346 0.02624
NM_022114.4(PRDM16):c.1032+285G>A rs139620466 0.02054
NM_022114.4(PRDM16):c.3696+111C>T rs76162834 0.01968
NM_022114.4(PRDM16):c.2692-282C>T rs77830654 0.01626
NM_022114.4(PRDM16):c.884+148A>G rs189195695 0.01601
NM_022114.4(PRDM16):c.884+149C>G rs182476908 0.01595
NM_022114.4(PRDM16):c.2604-202G>A rs113921814 0.01538
NM_022114.4(PRDM16):c.38-169C>A rs74050163 0.01285
NM_022114.4(PRDM16):c.573+112C>A rs78743764 0.01261
NM_022114.4(PRDM16):c.439-138G>C rs12086992 0.01248
NM_022114.4(PRDM16):c.2940-118G>A rs7546986 0.01241
NM_022114.4(PRDM16):c.439-130G>A rs117381898 0.01234
NM_022114.4(PRDM16):c.1033-118A>G rs55931338 0.01187
NM_022114.4(PRDM16):c.2861+37C>T rs188132529 0.01035
NM_022114.4(PRDM16):c.3522-227G>A rs7551599 0.01034
NM_022114.4(PRDM16):c.2692-274G>C rs144839875 0.00995
NM_022114.4(PRDM16):c.2691+240C>A rs142578797 0.00980
NM_022114.4(PRDM16):c.3285-241T>C rs116563480 0.00947
NM_022114.4(PRDM16):c.3697-107_3697-100del rs1557674999 0.00902
NM_022114.4(PRDM16):c.3285-233C>T rs192958292 0.00875
NM_022114.4(PRDM16):c.1032+54G>A rs61708696 0.00606
NM_022114.4(PRDM16):c.2604-25C>T rs181889448 0.00542
NM_022114.4(PRDM16):c.1187-44G>A rs111486045 0.00519
NM_022114.4(PRDM16):c.884+105G>A rs184651439 0.00488
NM_022114.4(PRDM16):c.2691+61G>A rs147744468 0.00476
NM_022114.4(PRDM16):c.1187-158A>G rs114791860 0.00470
NM_022114.4(PRDM16):c.38-315C>T rs186011855 0.00444
NM_022114.4(PRDM16):c.38-37C>T rs116565575 0.00443
NM_022114.4(PRDM16):c.1032+46C>G rs184088509 0.00337
NM_022114.4(PRDM16):c.438+39G>A rs377213212 0.00299
NM_022114.4(PRDM16):c.100G>A (p.Ala34Thr) rs187194973 0.00252
NM_022114.4(PRDM16):c.2861+38G>A rs192750605 0.00196
NM_022114.4(PRDM16):c.2506G>A (p.Gly836Ser) rs114204766 0.00168
NM_022114.4(PRDM16):c.2452G>A (p.Gly818Ser) rs201904226 0.00160
NM_022114.4(PRDM16):c.1684G>A (p.Val562Ile) rs150395260 0.00159
NM_022114.4(PRDM16):c.3687T>C (p.Ala1229=) rs188634763 0.00137
NM_022114.4(PRDM16):c.49G>A (p.Val17Ile) rs183153140 0.00137
NM_022114.4(PRDM16):c.1426C>T (p.Pro476Ser) rs188908415 0.00131
NM_022114.4(PRDM16):c.3110-13C>T rs150372316 0.00122
NM_022114.4(PRDM16):c.2290G>A (p.Val764Met) rs149333409 0.00117
NM_022114.4(PRDM16):c.3621A>T (p.Glu1207Asp) rs199972068 0.00117
NM_022114.4(PRDM16):c.2130G>A (p.Gly710=) rs193118666 0.00112
NM_022114.4(PRDM16):c.2940-18C>T rs377695146 0.00100
NM_022114.4(PRDM16):c.573+17A>G rs370287328 0.00091
NM_022114.4(PRDM16):c.1134C>G (p.Ser378=) rs200169663 0.00088
NM_022114.4(PRDM16):c.429C>T (p.Cys143=) rs150097149 0.00084
NM_022114.4(PRDM16):c.2296G>A (p.Gly766Ser) rs199998420 0.00081
NM_022114.4(PRDM16):c.3154G>A (p.Ala1052Thr) rs113879347 0.00072
NM_022114.4(PRDM16):c.2634C>T (p.Pro878=) rs201338158 0.00065
NM_022114.4(PRDM16):c.2406G>A (p.Pro802=) rs368750536 0.00063
NM_022114.4(PRDM16):c.2786C>A (p.Pro929His) rs145632008 0.00063
NM_022114.4(PRDM16):c.1599G>A (p.Ser533=) rs373205864 0.00059
NM_022114.4(PRDM16):c.2691+12G>T rs201371121 0.00059
NM_022114.4(PRDM16):c.2603+6C>T rs374549827 0.00058
NM_022114.4(PRDM16):c.38-14G>A rs368409902 0.00058
NM_022114.4(PRDM16):c.2449G>A (p.Gly817Ser) rs375308440 0.00057
NM_022114.4(PRDM16):c.553A>G (p.Met185Val) rs376567517 0.00053
NM_022114.4(PRDM16):c.142G>A (p.Val48Met) rs199968728 0.00051
NM_022114.4(PRDM16):c.481A>G (p.Asn161Asp) rs374664141 0.00048
NM_022114.4(PRDM16):c.3110-4G>A rs201495178 0.00046
NM_022114.4(PRDM16):c.439-41A>G rs2282197 0.00046
NM_022114.4(PRDM16):c.2576C>T (p.Ser859Leu) rs370046582 0.00045
NM_022114.4(PRDM16):c.2741T>C (p.Met914Thr) rs201304831 0.00045
NM_022114.4(PRDM16):c.2692-10A>G rs754274180 0.00043
NM_022114.4(PRDM16):c.2142G>A (p.Lys714=) rs200167919 0.00041
NM_022114.4(PRDM16):c.102G>A (p.Ala34=) rs374918897 0.00040
NM_022114.4(PRDM16):c.1093G>T (p.Ala365Ser) rs200562747 0.00035
NM_022114.4(PRDM16):c.2508C>T (p.Gly836=) rs374271999 0.00035
NM_022114.4(PRDM16):c.1632C>T (p.Asp544=) rs199499877 0.00034
NM_022114.4(PRDM16):c.1726G>A (p.Glu576Lys) rs201517929 0.00034
NM_022114.4(PRDM16):c.2952C>T (p.Cys984=) rs200234106 0.00034
NM_022114.4(PRDM16):c.488C>T (p.Ala163Val) rs201182055 0.00032
NM_022114.4(PRDM16):c.2618G>A (p.Arg873Gln) rs184929979 0.00029
NM_022114.4(PRDM16):c.885-4G>A rs374365034 0.00029
NM_022114.4(PRDM16):c.1033-17G>T rs374947232 0.00022
NM_022114.4(PRDM16):c.3498C>T (p.Ala1166=) rs368383914 0.00022
NM_022114.4(PRDM16):c.1797G>A (p.Ser599=) rs201769516 0.00021
NM_022114.4(PRDM16):c.3109+9C>T rs369808146 0.00021
NM_022114.4(PRDM16):c.2172G>A (p.Ala724=) rs773130347 0.00020
NM_022114.4(PRDM16):c.1032+45G>A rs79424834 0.00018
NM_022114.4(PRDM16):c.3051C>T (p.Phe1017=) rs778222564 0.00018
NM_022114.4(PRDM16):c.252C>T (p.Phe84=) rs370290776 0.00017
NM_022114.4(PRDM16):c.471C>T (p.Cys157=) rs201912658 0.00017
NM_022114.4(PRDM16):c.*21C>T rs373722939 0.00016
NM_022114.4(PRDM16):c.1578G>A (p.Pro526=) rs376747653 0.00016
NM_022114.4(PRDM16):c.2691+5G>A rs375994227 0.00016
NM_022114.4(PRDM16):c.2748G>A (p.Ala916=) rs370768364 0.00015
NM_022114.4(PRDM16):c.1187-10G>C rs201517837 0.00014
NM_022114.4(PRDM16):c.1815G>A (p.Glu605=) rs566856228 0.00014
NM_022114.4(PRDM16):c.3675G>C (p.Leu1225=) rs201038279 0.00014
NM_022114.4(PRDM16):c.884+7C>T rs373228175 0.00013
NM_022114.4(PRDM16):c.2426G>C (p.Ser809Thr) rs765866896 0.00012
NM_022114.4(PRDM16):c.1709C>T (p.Thr570Met) rs138655327 0.00011
NM_022114.4(PRDM16):c.1536C>T (p.Pro512=) rs368073318 0.00010
NM_022114.4(PRDM16):c.1953C>A (p.Gly651=) rs780589589 0.00010
NM_022114.4(PRDM16):c.615G>A (p.Glu205=) rs370059347 0.00010
NM_022114.4(PRDM16):c.714C>A (p.Leu238=) rs371540074 0.00010
NM_022114.4(PRDM16):c.1485G>A (p.Pro495=) rs370666366 0.00009
NM_022114.4(PRDM16):c.1674G>A (p.Leu558=) rs748822939 0.00009
NM_022114.4(PRDM16):c.2856G>A (p.Thr952=) rs563342786 0.00009
NM_022114.4(PRDM16):c.706G>A (p.Asp236Asn) rs185041492 0.00008
NM_022114.4(PRDM16):c.*15G>A rs771401380 0.00007
NM_022114.4(PRDM16):c.1839C>T (p.Thr613=) rs549179676 0.00007
NM_022114.4(PRDM16):c.2037C>T (p.Asp679=) rs770781991 0.00007
NM_022114.4(PRDM16):c.2814G>A (p.Thr938=) rs140540302 0.00007
NM_022114.4(PRDM16):c.3135G>A (p.Thr1045=) rs761078027 0.00007
NM_022114.4(PRDM16):c.884+9C>A rs372395047 0.00007
NM_022114.4(PRDM16):c.2062G>A (p.Ala688Thr) rs367580261 0.00006
NM_022114.4(PRDM16):c.2118C>T (p.Pro706=) rs543211916 0.00006
NM_022114.4(PRDM16):c.2295C>T (p.Gly765=) rs376224745 0.00006
NM_022114.4(PRDM16):c.3696+10C>T rs369030039 0.00006
NM_022114.4(PRDM16):c.75C>T (p.Asn25=) rs759261262 0.00006
NM_022114.4(PRDM16):c.969C>T (p.Asn323=) rs371151181 0.00006
NM_022114.4(PRDM16):c.1893C>T (p.Ser631=) rs372411909 0.00005
NM_022114.4(PRDM16):c.3306C>T (p.Asp1102=) rs199800219 0.00005
NM_022114.4(PRDM16):c.3405C>T (p.Ala1135=) rs765114438 0.00005
NM_022114.4(PRDM16):c.762C>T (p.Gly254=) rs763433232 0.00005
NM_022114.4(PRDM16):c.114C>T (p.Ala38=) rs372823594 0.00004
NM_022114.4(PRDM16):c.171C>T (p.Ser57=) rs369648897 0.00004
NM_022114.4(PRDM16):c.2283C>T (p.Ala761=) rs751542963 0.00004
NM_022114.4(PRDM16):c.2505C>T (p.Ala835=) rs762623730 0.00004
NM_022114.4(PRDM16):c.2940-15G>A rs538723120 0.00004
NM_022114.4(PRDM16):c.3270G>A (p.Thr1090=) rs375314464 0.00004
NM_022114.4(PRDM16):c.3696+11G>A rs775474986 0.00004
NM_022114.4(PRDM16):c.438+16C>G rs375294823 0.00004
NM_022114.4(PRDM16):c.777G>A (p.Ala259=) rs557978089 0.00004
NM_022114.4(PRDM16):c.885-5C>T rs374596243 0.00004
NM_022114.4(PRDM16):c.*2G>A rs368799129 0.00003
NM_022114.4(PRDM16):c.1962G>A (p.Ala654=) rs376206605 0.00003
NM_022114.4(PRDM16):c.756G>A (p.Thr252=) rs775660693 0.00003
NM_022114.4(PRDM16):c.912G>A (p.Thr304=) rs371323418 0.00003
NM_022114.4(PRDM16):c.1032+14C>T rs1420211007 0.00002
NM_022114.4(PRDM16):c.108C>T (p.Asp36=) rs770557050 0.00002
NM_022114.4(PRDM16):c.1116G>A (p.Gly372=) rs757093442 0.00002
NM_022114.4(PRDM16):c.3284+14C>T rs201774450 0.00002
NM_022114.4(PRDM16):c.489G>A (p.Ala163=) rs746338723 0.00002
NM_022114.4(PRDM16):c.801G>A (p.Glu267=) rs369972213 0.00002
NM_022114.4(PRDM16):c.1033-14A>G rs778504357 0.00001
NM_022114.4(PRDM16):c.1524C>T (p.Pro508=) rs537650016 0.00001
NM_022114.4(PRDM16):c.1725C>T (p.Pro575=) rs753442334 0.00001
NM_022114.4(PRDM16):c.1788C>T (p.Ser596=) rs766972389 0.00001
NM_022114.4(PRDM16):c.1807G>A (p.Asp603Asn) rs199984813 0.00001
NM_022114.4(PRDM16):c.2058G>A (p.Thr686=) rs368426649 0.00001
NM_022114.4(PRDM16):c.2556G>A (p.Pro852=) rs570631594 0.00001
NM_022114.4(PRDM16):c.2820C>T (p.Ser940=) rs764764989 0.00001
NM_022114.4(PRDM16):c.2940-16C>T rs374845861 0.00001
NM_022114.4(PRDM16):c.3129C>T (p.Val1043=) rs199507891 0.00001
NM_022114.4(PRDM16):c.3284+46A>C rs534313977 0.00001
NM_022114.4(PRDM16):c.3300C>T (p.Ile1100=) rs757372504 0.00001
NM_022114.4(PRDM16):c.3461A>C (p.Glu1154Ala) rs527844629 0.00001
NM_022114.4(PRDM16):c.573+8C>T rs751831812 0.00001
NM_022114.4(PRDM16):c.666C>T (p.Pro222=) rs876657565 0.00001
NM_022114.4(PRDM16):c.1074G>A (p.Ser358=) rs767835445
NM_022114.4(PRDM16):c.1191G>A (p.Glu397=) rs1569727082
NM_022114.4(PRDM16):c.1356G>A (p.Thr452=) rs567761188
NM_022114.4(PRDM16):c.1965C>A (p.Pro655=) rs1057524280
NM_022114.4(PRDM16):c.2148G>C (p.Leu716=) rs886908974
NM_022114.4(PRDM16):c.2259C>G (p.Ala753=) rs548246861
NM_022114.4(PRDM16):c.2391C>A (p.Ser797=) rs370931714
NM_022114.4(PRDM16):c.2391C>T (p.Ser797=) rs370931714
NM_022114.4(PRDM16):c.2448C>T (p.Asn816=) rs372189819
NM_022114.4(PRDM16):c.2468G>A (p.Arg823His) rs371654192
NM_022114.4(PRDM16):c.2468G>C (p.Arg823Pro) rs371654192
NM_022114.4(PRDM16):c.2692-159dup rs35843880
NM_022114.4(PRDM16):c.2815C>A (p.Leu939Ile) rs150022595
NM_022114.4(PRDM16):c.2815C>G (p.Leu939Val) rs150022595
NM_022114.4(PRDM16):c.2862-178C>G rs149141706
NM_022114.4(PRDM16):c.3109+12G>A rs200643126
NM_022114.4(PRDM16):c.3109+12G>C rs200643126
NM_022114.4(PRDM16):c.3366CGA[3] (p.Asp1125dup) rs758774731
NM_022114.4(PRDM16):c.3522-245del rs75521395
NM_022114.4(PRDM16):c.3697-29_3697-28insGGGATGGCCCGCCCTGCCCACGCGCTCACCTGCCTGTCCGGGATGGCCCGCCCTGCCCACGCGCTCACCTGCCTGTCC
NM_022114.4(PRDM16):c.439-140C>G rs113915415
NM_022114.4(PRDM16):c.439-21G>C rs77356071
NM_022114.4(PRDM16):c.574-20_574-17del rs565661633
NM_022114.4(PRDM16):c.676+17A>G rs1553173395
NM_022114.4(PRDM16):c.677-16_677-11dup rs138423019
NM_022114.4(PRDM16):c.876C>T (p.Asn292=) rs1553174363

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