ClinVar Miner

List of variants in gene PTPN11 reported as benign for not provided

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Gene type:
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Total variants: 56
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HGVS dbSNP gnomAD frequency
NM_002834.5(PTPN11):c.1600-95C>T rs3741983 0.37076
NM_002834.5(PTPN11):c.333-223A>G rs2301756 0.20638
NM_002834.3(PTPN11):c.-273G>A rs58805176 0.10884
NM_002834.5(PTPN11):c.14+25G>C rs7972574 0.05545
NM_002834.5(PTPN11):c.854-21C>T rs41279090 0.05308
NM_002834.5(PTPN11):c.1713-146G>A rs4767860 0.04808
NM_002834.5(PTPN11):c.*33-151A>C rs10850041 0.04508
NM_002834.5(PTPN11):c.138-181G>C rs7976467 0.04265
NM_002834.5(PTPN11):c.14+54C>A rs7973432 0.04259
NM_002834.5(PTPN11):c.1599+293C>T rs7975439 0.04161
NM_002834.5(PTPN11):c.1093-9C>A rs12301915 0.04151
NM_002834.5(PTPN11):c.1379+273G>A rs41279092 0.04135
NM_002834.5(PTPN11):c.525+272T>G rs145442861 0.03032
NM_002834.5(PTPN11):c.255C>T (p.His85=) rs61736914 0.02271
NM_002834.5(PTPN11):c.1712+289G>C rs139055019 0.01579
NM_002834.5(PTPN11):c.525+12G>C rs41304351 0.01035
NM_002834.5(PTPN11):c.854-30T>C rs144391508 0.00909
NM_002834.5(PTPN11):c.854-32A>C rs187389813 0.00867
NM_002834.5(PTPN11):c.757-69T>C rs150087259 0.00468
NM_002834.5(PTPN11):c.853+80C>T rs113537844 0.00383
NM_002834.5(PTPN11):c.*325G>A rs192080780 0.00304
NM_002834.5(PTPN11):c.332+17T>G rs115658366 0.00257
NM_002834.5(PTPN11):c.1447+26G>A rs200408121 0.00099
NM_002834.5(PTPN11):c.1658C>T (p.Thr553Met) rs148176616 0.00048
NM_002834.5(PTPN11):c.1379+20C>T rs184743462 0.00047
NM_002834.5(PTPN11):c.*1805C>T rs188162577 0.00033
NM_002834.5(PTPN11):c.643-6dup rs758889732 0.00030
NM_002834.5(PTPN11):c.48A>G (p.Ala16=) rs372736227 0.00029
NM_002834.5(PTPN11):c.333-3T>C rs146749153 0.00026
NM_002834.5(PTPN11):c.925A>G (p.Ile309Val) rs201787206 0.00026
NM_002834.5(PTPN11):c.*48C>T rs1044921022 0.00023
NM_002834.5(PTPN11):c.1746C>T (p.Asn582=) rs397516800 0.00013
NM_002834.5(PTPN11):c.558G>T (p.Arg186=) rs200920312 0.00011
NM_002834.5(PTPN11):c.486C>T (p.Asp162=) rs397507522 0.00009
NM_002834.5(PTPN11):c.525+34A>G rs369287659 0.00009
NM_002834.5(PTPN11):c.990A>C (p.Thr330=) rs369739920 0.00005
NM_002834.5(PTPN11):c.879C>T (p.His293=) rs117730996 0.00003
NM_002834.5(PTPN11):c.14+42C>T rs553727130 0.00002
NM_002834.5(PTPN11):c.1028G>A (p.Arg343Gln) rs535800148 0.00001
NM_002834.5(PTPN11):c.934-24A>G rs765033502 0.00001
NM_002834.5(PTPN11):c.996C>T (p.Gly332=) rs397507533 0.00001
NM_002834.5(PTPN11):c.*33-144dup rs1191524369
NM_002834.5(PTPN11):c.*33-152A>C rs184193964
NM_002834.5(PTPN11):c.-33G>A rs2135817333
NM_002834.5(PTPN11):c.132C>A (p.Ser44=) rs397507502
NM_002834.5(PTPN11):c.138-216dup rs369558589
NM_002834.5(PTPN11):c.1448-15_1448-13del rs775920290
NM_002834.5(PTPN11):c.1713-482dup
NM_002834.5(PTPN11):c.332+29C>G rs2135863243
NM_002834.5(PTPN11):c.333-19del rs766492276
NM_002834.5(PTPN11):c.525+102TTTA[8] rs141468112
NM_002834.5(PTPN11):c.53A>G (p.Asn18Ser) rs587778635
NM_002834.5(PTPN11):c.642+158_642+159del rs753974743
NM_002834.5(PTPN11):c.642+159del rs753974743
NM_002834.5(PTPN11):c.642+159dup rs753974743
NM_002834.5(PTPN11):c.643-62del rs140552217

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