List of variants in gene SETX reported as benign for Spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 2

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Minimum conflict level: Report conflict between different conditions
Gene type: Distinguish antisense genes from sense genes
Show significances as they were submitted (without aggregation into standard terms)
		ClinVar version:

Total variants: 56

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HGVS	dbSNP	gnomAD frequency
NM_015046.7(SETX):c.3576T>G (p.Asp1192Glu)	rs1185193	0.76694
NM_015046.7(SETX):c.1077T>C (p.Tyr359=)	rs9411449	0.75774
NM_015046.7(SETX):c.3754G>A (p.Gly1252Arg)	rs1183768	0.68476
NM_015046.7(SETX):c.4156A>G (p.Ile1386Val)	rs543573	0.68049
NM_015046.7(SETX):c.7759A>G (p.Ile2587Val)	rs1056899	0.44536
NM_015046.7(SETX):c.6655-24G>A	rs11243704	0.44367
NM_015046.7(SETX):c.5563A>G (p.Thr1855Ala)	rs2296871	0.31596
NM_015046.7(SETX):c.5811T>C (p.Asp1937=)	rs2296869	0.31585
NM_015046.7(SETX):c.5374+16C>T	rs2296872	0.24325
NM_015046.7(SETX):c.5781+12dup	rs3831154	0.24271
NM_015046.7(SETX):c.*562C>A	rs11787894	0.16282
NM_015046.7(SETX):c.*626C>T	rs11795382	0.16247
NM_015046.7(SETX):c.7100+27A>G	rs2296865	0.16223
NM_015046.7(SETX):c.1979C>G (p.Ala660Gly)	rs882709	0.12168
NM_015046.7(SETX):c.*2262A>G	rs997784	0.09345
NM_015046.7(SETX):c.6935+8T>C	rs17148873	0.09319
NM_015046.7(SETX):c.7834A>G (p.Ser2612Gly)	rs3739927	0.08329
NM_015046.7(SETX):c.3147C>T (p.His1049=)	rs3739921	0.07515
NM_015046.7(SETX):c.6546+32T>A	rs2296873	0.07069
NM_015046.7(SETX):c.*1365G>T	rs7875801	0.06684
NM_015046.7(SETX):c.498+30T>C	rs11790312	0.05653
NM_015046.7(SETX):c.3455T>G (p.Phe1152Cys)	rs3739922	0.04708
NM_015046.7(SETX):c.*717T>C	rs17148857	0.04316
NM_015046.7(SETX):c.*1700G>T	rs75682594	0.03993
NM_015046.7(SETX):c.*561A>C	rs73661150	0.02138
NM_015046.7(SETX):c.498+20G>A	rs73659013	0.02106
NM_015046.7(SETX):c.6936-27T>G	rs2296866	0.02083
NM_015046.7(SETX):c.6106+14G>A	rs73661157	0.01840
NM_015046.7(SETX):c.*1052T>A	rs12349210	0.01647
NM_015046.7(SETX):c.*1288T>C	rs72765812	0.01645
NM_015046.7(SETX):c.3182C>T (p.Pro1061Leu)	rs12352982	0.01591
NM_015046.7(SETX):c.*849G>T	rs74975459	0.01559
NM_015046.7(SETX):c.*1224G>C	rs10491906	0.01458
NM_015046.7(SETX):c.2975A>G (p.Lys992Arg)	rs61742937	0.01445
NM_015046.7(SETX):c.6507G>A (p.Gly2169=)	rs34073320	0.01300
NM_015046.7(SETX):c.*351G>T	rs117409290	0.01236
NM_015046.7(SETX):c.*548A>T	rs139883935	0.01078
NM_015046.7(SETX):c.59G>A (p.Arg20His)	rs79740039	0.00602
NM_015046.7(SETX):c.*319C>T	rs1056912	0.00570
NM_015046.7(SETX):c.5275-43T>C	rs144258500	0.00547
NM_015046.7(SETX):c.4755T>G (p.Pro1585=)	rs151237267	0.00484
NM_015046.7(SETX):c.*475A>C	rs60760878	0.00452
NM_015046.7(SETX):c.3663G>C (p.Lys1221Asn)	rs12344006	0.00412
NM_015046.7(SETX):c.7371T>C (p.His2457=)	rs113071480	0.00399
NM_015046.7(SETX):c.3568A>G (p.Lys1190Glu)	rs35473230	0.00364
NM_015046.7(SETX):c.6108A>G (p.Gly2036=)	rs35815657	0.00358
NM_015046.7(SETX):c.7114G>A (p.Asp2372Asn)	rs150673589	0.00178
NM_015046.7(SETX):c.5781+10G>A	rs537414669	0.00159
NM_015046.7(SETX):c.3336T>C (p.Ala1112=)	rs150687078	0.00053
NM_015046.7(SETX):c.*1148T>G	rs138991890
NM_015046.7(SETX):c.*1368G>A	rs7025
NM_015046.7(SETX):c.*1370G>C	rs116822064
NM_015046.7(SETX):c.431_432del	rs112251805
NM_015046.7(SETX):c.3057TGA[7] (p.Asp1024dup)	rs572772837
NM_015046.7(SETX):c.6843-16dup	rs34769225
NM_015046.7(SETX):c.6843-5del	rs34769225

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