ClinVar Miner

List of variants in gene SPRED1 reported as likely benign by Labcorp Genetics (formerly Invitae), Labcorp

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Gene type:
ClinVar version:
Total variants: 176
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HGVS dbSNP gnomAD frequency
NM_152594.3(SPRED1):c.702C>G (p.Ile234Met) rs138553244 0.00074
NM_152594.3(SPRED1):c.30C>A (p.Asn10Lys) rs201692618 0.00042
NM_152594.3(SPRED1):c.944C>T (p.Pro315Leu) rs115440602 0.00029
NM_152594.3(SPRED1):c.377-10A>G rs376134678 0.00023
NM_152594.3(SPRED1):c.124G>A (p.Val42Ile) rs147204964 0.00017
NM_152594.3(SPRED1):c.963G>A (p.Lys321=) rs369711772 0.00011
NM_152594.3(SPRED1):c.1192G>A (p.Asp398Asn) rs771480941 0.00009
NM_152594.3(SPRED1):c.177T>C (p.Phe59=) rs397517871 0.00009
NM_152594.3(SPRED1):c.1273A>G (p.Met425Val) rs368307475 0.00006
NM_152594.3(SPRED1):c.582+17T>A rs200904257 0.00006
NM_152594.3(SPRED1):c.1176G>A (p.Ser392=) rs755223172 0.00005
NM_152594.3(SPRED1):c.685-8T>C rs760690837 0.00005
NM_152594.3(SPRED1):c.1260C>T (p.Tyr420=) rs202087411 0.00004
NM_152594.3(SPRED1):c.377-12C>T rs371837252 0.00004
NM_152594.3(SPRED1):c.583-15T>C rs371902444 0.00004
NM_152594.3(SPRED1):c.594T>C (p.Gly198=) rs756643495 0.00004
NM_152594.3(SPRED1):c.634G>A (p.Val212Ile) rs769630742 0.00004
NM_152594.3(SPRED1):c.886T>C (p.Cys296Arg) rs554327738 0.00004
NM_152594.3(SPRED1):c.306G>A (p.Thr102=) rs372791883 0.00003
NM_152594.3(SPRED1):c.424-5A>G rs752656697 0.00003
NM_152594.3(SPRED1):c.438T>C (p.Asp146=) rs757357920 0.00003
NM_152594.3(SPRED1):c.583-9G>T rs1421813002 0.00003
NM_152594.3(SPRED1):c.645A>C (p.Gln215His) rs144227155 0.00003
NM_152594.3(SPRED1):c.685-10T>G rs1325841398 0.00003
NM_152594.3(SPRED1):c.1005C>T (p.Cys335=) rs768937237 0.00002
NM_152594.3(SPRED1):c.1080A>G (p.Lys360=) rs749654043 0.00002
NM_152594.3(SPRED1):c.207+11A>T rs755730953 0.00002
NM_152594.3(SPRED1):c.376+17A>G rs542729153 0.00002
NM_152594.3(SPRED1):c.408G>T (p.Gly136=) rs765800186 0.00002
NM_152594.3(SPRED1):c.426A>G (p.Ala142=) rs753701682 0.00002
NM_152594.3(SPRED1):c.435G>A (p.Glu145=) rs1895992523 0.00002
NM_152594.3(SPRED1):c.576C>T (p.Ala192=) rs1356983128 0.00002
NM_152594.3(SPRED1):c.588A>T (p.Thr196=) rs2542739158 0.00002
NM_152594.3(SPRED1):c.633C>T (p.Tyr211=) rs149991304 0.00002
NM_152594.3(SPRED1):c.685-17A>G rs1223645192 0.00002
NM_152594.3(SPRED1):c.687C>A (p.Val229=) rs376226762 0.00002
NM_152594.3(SPRED1):c.1146C>T (p.Asp382=) rs1286583801 0.00001
NM_152594.3(SPRED1):c.1185T>C (p.Thr395=) rs1888488292 0.00001
NM_152594.3(SPRED1):c.1188C>T (p.Ser396=) rs773409045 0.00001
NM_152594.3(SPRED1):c.1191C>T (p.Asp397=) rs749745659 0.00001
NM_152594.3(SPRED1):c.123C>T (p.Ser41=) rs748759533 0.00001
NM_152594.3(SPRED1):c.1245A>G (p.Pro415=) rs934682906 0.00001
NM_152594.3(SPRED1):c.1278C>T (p.Cys426=) rs1313604330 0.00001
NM_152594.3(SPRED1):c.196A>C (p.Arg66=) rs751923342 0.00001
NM_152594.3(SPRED1):c.207+19A>G rs369538663 0.00001
NM_152594.3(SPRED1):c.208-6T>C rs1241478218 0.00001
NM_152594.3(SPRED1):c.21T>A (p.Thr7=) rs1220734936 0.00001
NM_152594.3(SPRED1):c.27C>T (p.Asp9=) rs727504717 0.00001
NM_152594.3(SPRED1):c.32+12A>G rs202192533 0.00001
NM_152594.3(SPRED1):c.32+18C>T rs768482785 0.00001
NM_152594.3(SPRED1):c.321T>C (p.Ala107=) rs770197803 0.00001
NM_152594.3(SPRED1):c.33-11A>G rs775671940 0.00001
NM_152594.3(SPRED1):c.33-14T>C rs1566859694 0.00001
NM_152594.3(SPRED1):c.33-7A>G rs760850290 0.00001
NM_152594.3(SPRED1):c.348C>T (p.Ile116=) rs773363523 0.00001
NM_152594.3(SPRED1):c.376+19T>G rs1222539348 0.00001
NM_152594.3(SPRED1):c.377-19del rs1267902445 0.00001
NM_152594.3(SPRED1):c.384C>T (p.Pro128=) rs761058615 0.00001
NM_152594.3(SPRED1):c.39T>C (p.Ser13=) rs1303549798 0.00001
NM_152594.3(SPRED1):c.423+10G>T rs1350887785 0.00001
NM_152594.3(SPRED1):c.423+11G>A rs2542700422 0.00001
NM_152594.3(SPRED1):c.423+17A>G rs1263567092 0.00001
NM_152594.3(SPRED1):c.424-15G>A rs1438431114 0.00001
NM_152594.3(SPRED1):c.546T>C (p.Asn182=) rs1419303814 0.00001
NM_152594.3(SPRED1):c.561C>T (p.Tyr187=) rs201335683 0.00001
NM_152594.3(SPRED1):c.570C>T (p.Ser190=) rs758617124 0.00001
NM_152594.3(SPRED1):c.582+18T>C rs781686509 0.00001
NM_152594.3(SPRED1):c.60G>C (p.Val20=) rs367745143 0.00001
NM_152594.3(SPRED1):c.669A>G (p.Leu223=) rs774530752 0.00001
NM_152594.3(SPRED1):c.852A>G (p.Lys284=) rs1160876585 0.00001
NM_152594.3(SPRED1):c.888T>C (p.Cys296=) rs775556490 0.00001
NM_152594.3(SPRED1):c.930A>G (p.Val310=) rs1164761920 0.00001
NM_152594.3(SPRED1):c.951A>T (p.Ser317=) rs899712805 0.00001
NM_152594.3(SPRED1):c.954A>G (p.Leu318=) rs753357510 0.00001
NM_152594.3(SPRED1):c.990T>G (p.Gly330=) rs1184835258 0.00001
NM_152594.3(SPRED1):c.999T>C (p.Ser333=) rs1888480574 0.00001
NM_152594.3(SPRED1):c.1008A>G (p.Val336=) rs1555392775
NM_152594.3(SPRED1):c.1011C>T (p.Tyr337=) rs2141016437
NM_152594.3(SPRED1):c.1021A>C (p.Arg341=)
NM_152594.3(SPRED1):c.102T>C (p.Leu34=) rs2140978435
NM_152594.3(SPRED1):c.1065T>C (p.Ala355=) rs2542743779
NM_152594.3(SPRED1):c.108G>T (p.Gly36=) rs2542660940
NM_152594.3(SPRED1):c.1110C>G (p.Leu370=) rs876657584
NM_152594.3(SPRED1):c.1110C>T (p.Leu370=) rs876657584
NM_152594.3(SPRED1):c.1143A>C (p.Ser381=) rs2542744054
NM_152594.3(SPRED1):c.1158T>C (p.Asp386=) rs2141016567
NM_152594.3(SPRED1):c.1170C>G (p.Pro390=) rs781585106
NM_152594.3(SPRED1):c.1170C>T (p.Pro390=) rs781585106
NM_152594.3(SPRED1):c.117A>G (p.Leu39=) rs2542660979
NM_152594.3(SPRED1):c.1185T>G (p.Thr395=) rs1888488292
NM_152594.3(SPRED1):c.1194C>T (p.Asp398=) rs2141016629
NM_152594.3(SPRED1):c.1200C>T (p.Phe400=) rs2141016638
NM_152594.3(SPRED1):c.1203C>T (p.Cys401=) rs2141016645
NM_152594.3(SPRED1):c.1206G>A (p.Leu402=) rs2542744281
NM_152594.3(SPRED1):c.1215A>G (p.Leu405=) rs1595764001
NM_152594.3(SPRED1):c.1218C>T (p.Ala406=)
NM_152594.3(SPRED1):c.1224A>G (p.Val408=) rs1888489718
NM_152594.3(SPRED1):c.1254C>T (p.Cys418=) rs2141016717
NM_152594.3(SPRED1):c.1287T>C (p.Cys429=) rs2542744613
NM_152594.3(SPRED1):c.1296A>G (p.Ala432=) rs2141016767
NM_152594.3(SPRED1):c.1317A>G (p.Lys439=) rs2542744695
NM_152594.3(SPRED1):c.1329T>A (p.Ala443=) rs2542744723
NM_152594.3(SPRED1):c.159T>C (p.Asn53=) rs2542661124
NM_152594.3(SPRED1):c.15G>C (p.Thr5=) rs1278027767
NM_152594.3(SPRED1):c.174T>C (p.Phe58=) rs1595733589
NM_152594.3(SPRED1):c.207+10A>G rs918390069
NM_152594.3(SPRED1):c.207+12T>C rs929799385
NM_152594.3(SPRED1):c.207+13G>A
NM_152594.3(SPRED1):c.207+16T>G rs1322998447
NM_152594.3(SPRED1):c.208-10C>G rs1353650192
NM_152594.3(SPRED1):c.208-11G>A rs751879511
NM_152594.3(SPRED1):c.208-12G>C rs2542695352
NM_152594.3(SPRED1):c.228T>A (p.Leu76=) rs763749955
NM_152594.3(SPRED1):c.279G>A (p.Lys93=) rs778384985
NM_152594.3(SPRED1):c.288C>T (p.Asp96=) rs2542695696
NM_152594.3(SPRED1):c.290_291delinsGA (p.Lys97Arg) rs1555391042
NM_152594.3(SPRED1):c.300T>C (p.Gly100=) rs1895620171
NM_152594.3(SPRED1):c.32+14T>C rs2140943483
NM_152594.3(SPRED1):c.32+16A>G
NM_152594.3(SPRED1):c.32+18C>G rs768482785
NM_152594.3(SPRED1):c.32+3_32+6dup rs2542594551
NM_152594.3(SPRED1):c.32+9C>T rs2542594576
NM_152594.3(SPRED1):c.363G>A (p.Glu121=) rs2542695974
NM_152594.3(SPRED1):c.376+10C>A rs2140994968
NM_152594.3(SPRED1):c.376+9T>G rs1555391063
NM_152594.3(SPRED1):c.377-16T>C
NM_152594.3(SPRED1):c.377-16T>G rs1265763193
NM_152594.3(SPRED1):c.377-21_377-18del
NM_152594.3(SPRED1):c.381C>T (p.Cys127=) rs1285949702
NM_152594.3(SPRED1):c.402T>C (p.Ala134=) rs1341388240
NM_152594.3(SPRED1):c.423+19G>A rs2542700435
NM_152594.3(SPRED1):c.423+20G>A rs767491326
NM_152594.3(SPRED1):c.423+8A>G rs2140996685
NM_152594.3(SPRED1):c.424-14G>A
NM_152594.3(SPRED1):c.424-16G>A
NM_152594.3(SPRED1):c.424-19T>C rs2542723493
NM_152594.3(SPRED1):c.424-19T>G rs2542723493
NM_152594.3(SPRED1):c.444C>G (p.Ser148=) rs2542723582
NM_152594.3(SPRED1):c.459G>A (p.Lys153=) rs1318587614
NM_152594.3(SPRED1):c.486T>G (p.Val162=) rs2141007825
NM_152594.3(SPRED1):c.510C>T (p.Ser170=) rs771673657
NM_152594.3(SPRED1):c.51G>A (p.Val17=) rs864622421
NM_152594.3(SPRED1):c.52C>A (p.Arg18=) rs750777752
NM_152594.3(SPRED1):c.531C>G (p.Pro177=) rs1595756882
NM_152594.3(SPRED1):c.531C>T (p.Pro177=) rs1595756882
NM_152594.3(SPRED1):c.549C>T (p.Ala183=) rs2542723953
NM_152594.3(SPRED1):c.552A>G (p.Arg184=) rs2141007956
NM_152594.3(SPRED1):c.582+16A>G rs1895996789
NM_152594.3(SPRED1):c.583-18A>C rs2141014785
NM_152594.3(SPRED1):c.583-20A>T
NM_152594.3(SPRED1):c.583-8T>C rs755068474
NM_152594.3(SPRED1):c.60G>A (p.Val20=) rs367745143
NM_152594.3(SPRED1):c.619A>C (p.Arg207=) rs368660900
NM_152594.3(SPRED1):c.675C>G (p.Ser225=)
NM_152594.3(SPRED1):c.684+10G>A rs1555392611
NM_152594.3(SPRED1):c.684+13A>G rs1335075291
NM_152594.3(SPRED1):c.685-13G>A rs2542742290
NM_152594.3(SPRED1):c.685-15_685-14del rs566051898
NM_152594.3(SPRED1):c.685-17A>T rs1223645192
NM_152594.3(SPRED1):c.687C>T (p.Val229=) rs376226762
NM_152594.3(SPRED1):c.69C>T (p.Thr23=) rs755788325
NM_152594.3(SPRED1):c.751C>A (p.Arg251=) rs1172820756
NM_152594.3(SPRED1):c.753A>T (p.Arg251=) rs1042940854
NM_152594.3(SPRED1):c.777A>T (p.Ala259=) rs1888473597
NM_152594.3(SPRED1):c.837T>C (p.Ser279=)
NM_152594.3(SPRED1):c.843G>A (p.Gln281=) rs1373204659
NM_152594.3(SPRED1):c.861T>C (p.Ser287=) rs2542742815
NM_152594.3(SPRED1):c.877C>T (p.Leu293=)
NM_152594.3(SPRED1):c.879G>C (p.Leu293=) rs535687467
NM_152594.3(SPRED1):c.885T>C (p.Ser295=) rs1888476496
NM_152594.3(SPRED1):c.90A>C (p.Gly30=) rs2542660900
NM_152594.3(SPRED1):c.912A>G (p.Ser304=) rs2141016283
NM_152594.3(SPRED1):c.915C>G (p.Pro305=) rs2141016292
NM_152594.3(SPRED1):c.939G>T (p.Thr313=) rs140644874
NM_152594.3(SPRED1):c.948C>G (p.Ser316=) rs1595763720
NM_152594.3(SPRED1):c.9G>A (p.Glu3=) rs1429162267

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