ClinVar Miner

List of variants in gene SPTAN1 reported as benign for not provided

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Gene type:
ClinVar version:
Total variants: 132
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HGVS dbSNP gnomAD frequency
NM_001130438.3(SPTAN1):c.1573-180G>A rs4384085 0.99656
NM_001130438.3(SPTAN1):c.6762+251dup rs11442134 0.99651
NM_001130438.3(SPTAN1):c.6576+94_6576+95insAA rs10694437 0.99191
NM_001130438.3(SPTAN1):c.2779-172A>G rs7026966 0.96938
NM_001130438.3(SPTAN1):c.1221+321T>C rs4837281 0.96936
NM_001130438.3(SPTAN1):c.1086-83A>G rs4837280 0.96934
NM_001130438.3(SPTAN1):c.2194-82A>G rs4240431 0.96934
NM_001130438.3(SPTAN1):c.1222-274T>C rs7031524 0.96928
NM_001130438.3(SPTAN1):c.237+335G>A rs9696395 0.96925
NM_001130438.3(SPTAN1):c.5601-156T>C rs4837290 0.96909
NM_001130438.3(SPTAN1):c.2560+43G>A rs4836615 0.96851
NM_001130438.3(SPTAN1):c.4905+41C>G rs7024498 0.96844
NM_001130438.3(SPTAN1):c.505-176C>T rs2297767 0.96797
NM_001130438.3(SPTAN1):c.3007-212A>G rs10819419 0.96725
NM_001130438.3(SPTAN1):c.2871+228A>C rs4837287 0.96666
NM_001130438.3(SPTAN1):c.2779-112G>A rs7027388 0.96624
NM_001130438.3(SPTAN1):c.3155+85G>A rs3814530 0.93816
NM_001130438.3(SPTAN1):c.6708-47G>A rs7866175 0.93246
NM_001130438.3(SPTAN1):c.4491+201T>C rs7357662 0.91235
NM_001130438.3(SPTAN1):c.3580-246C>G rs6478841 0.90189
NM_001130438.3(SPTAN1):c.2871+135A>G rs4837286 0.90114
NM_001130438.3(SPTAN1):c.6763-109A>G rs10760569 0.88837
NM_001130438.3(SPTAN1):c.1221+286T>A rs1890104 0.78340
NM_001130438.3(SPTAN1):c.5478+110C>G rs3750332 0.76653
NM_001130438.3(SPTAN1):c.2778+196C>G rs11790032 0.75132
NM_001130438.3(SPTAN1):c.6576+228G>C rs10760568 0.75073
NM_001130438.3(SPTAN1):c.3486C>T (p.Leu1162=) rs2227864 0.74835
NM_001130438.3(SPTAN1):c.651+219A>G rs2297771 0.74821
NM_001130438.3(SPTAN1):c.2778+257G>A rs10988049 0.72950
NM_001130438.3(SPTAN1):c.505-89C>T rs2297768 0.72385
NM_001130438.3(SPTAN1):c.363+144C>T rs2152833 0.72336
NM_001130438.3(SPTAN1):c.2560+47C>T rs4837284 0.72327
NM_001130438.3(SPTAN1):c.5406C>T (p.Thr1802=) rs2227862 0.72171
NM_001130438.3(SPTAN1):c.3627+201G>A rs4837289 0.71855
NM_001130438.3(SPTAN1):c.6280-27C>T rs3737308 0.71407
NM_001130438.3(SPTAN1):c.364-304G>T rs7047416 0.70536
NM_001130438.3(SPTAN1):c.5479-41A>C rs7864187 0.22153
NM_001130438.3(SPTAN1):c.6707+251C>A rs7857728 0.19740
NM_001130438.3(SPTAN1):c.6577-121C>T rs1572914 0.17941
NM_001130438.3(SPTAN1):c.6576+249T>C rs7038602 0.16613
NM_001130438.3(SPTAN1):c.363+274A>G rs3763599 0.15591
NM_001130438.3(SPTAN1):c.1222-247G>A rs7046238 0.15213
NM_001130438.3(SPTAN1):c.4758+109G>T rs13299607 0.11884
NM_001130438.3(SPTAN1):c.6708-78C>T rs41308912 0.07163
NM_001130438.3(SPTAN1):c.3006+100G>C rs62584843 0.03873
NM_001130438.3(SPTAN1):c.1222-273G>A rs77103380 0.03384
NM_001130438.3(SPTAN1):c.3156-221C>T rs76196653 0.03382
NM_001130438.3(SPTAN1):c.3546T>C (p.Asp1182=) rs945831 0.03378
NM_001130438.3(SPTAN1):c.5044-276G>T rs117630545 0.03158
NM_001130438.3(SPTAN1):c.651+113G>A rs10513498 0.03081
NM_001130438.3(SPTAN1):c.2779-143T>C rs74813851 0.03050
NM_001130438.3(SPTAN1):c.5358-214C>T rs76393340 0.03035
NM_001130438.3(SPTAN1):c.2011+94A>G rs76531514 0.03006
NM_001130438.3(SPTAN1):c.6708-244C>T rs12003066 0.02926
NM_001130438.3(SPTAN1):c.2872-42G>A rs4307429 0.02839
NM_001130438.3(SPTAN1):c.4491+289G>A rs77315490 0.02518
NM_001130438.3(SPTAN1):c.3520-209A>G rs112064644 0.02517
NM_001130438.3(SPTAN1):c.4773+323G>A rs74482094 0.02511
NM_001130438.3(SPTAN1):c.3579+225C>T rs79268762 0.02506
NM_001130438.3(SPTAN1):c.3580-279C>G rs78856736 0.02447
NM_001130438.3(SPTAN1):c.6707+118A>G rs114576138 0.02441
NM_001130438.3(SPTAN1):c.2012-146T>C rs78064656 0.02432
NM_001130438.3(SPTAN1):c.3627+312C>T rs114198206 0.02408
NM_001130438.3(SPTAN1):c.3520-93A>G rs78493234 0.02287
NM_001130438.3(SPTAN1):c.3155+153G>C rs76781152 0.02285
NM_001130438.3(SPTAN1):c.1462-27T>A rs7040737 0.02284
NM_001130438.3(SPTAN1):c.6707+220G>A rs7857827 0.02279
NM_001130438.3(SPTAN1):c.4774-223A>G rs77594718 0.02127
NM_001130438.3(SPTAN1):c.6576+131dup rs150387180 0.02073
NM_001130438.3(SPTAN1):c.6707+139G>A rs77733303 0.01984
NM_001130438.3(SPTAN1):c.2011+28A>G rs76614650 0.01942
NM_001130438.3(SPTAN1):c.5437C>A (p.Arg1813=) rs3750333 0.01558
NM_001130438.3(SPTAN1):c.6660C>T (p.Asn2220=) rs112955915 0.00645
NM_001130438.3(SPTAN1):c.652-6G>A rs115815276 0.00436
NM_001130438.3(SPTAN1):c.6549C>A (p.Thr2183=) rs116778543 0.00379
NM_001130438.3(SPTAN1):c.5552C>T (p.Ala1851Val) rs11543347 0.00370
NM_001130438.3(SPTAN1):c.1303T>G (p.Ser435Ala) rs144787939 0.00217
NM_001130438.3(SPTAN1):c.3720-5T>G rs200543425 0.00180
NM_001130438.3(SPTAN1):c.3051G>A (p.Pro1017=) rs140279996 0.00175
NM_001130438.3(SPTAN1):c.6234C>T (p.Ala2078=) rs147132904 0.00175
NM_001130438.3(SPTAN1):c.5460G>A (p.Ala1820=) rs140191388 0.00161
NM_001130438.3(SPTAN1):c.6111C>T (p.Gly2037=) rs139799727 0.00154
NM_001130438.3(SPTAN1):c.1330G>A (p.Val444Ile) rs77358650 0.00127
NM_001130438.3(SPTAN1):c.1737C>T (p.Phe579=) rs143941068 0.00113
NM_001130438.3(SPTAN1):c.1511C>T (p.Ala504Val) rs148727077 0.00097
NM_001130438.3(SPTAN1):c.4199A>T (p.Gln1400Leu) rs143108250 0.00073
NM_001130438.3(SPTAN1):c.7309-15T>C rs370705867 0.00067
NM_001130438.3(SPTAN1):c.4283C>G (p.Ala1428Gly) rs143166100 0.00054
NM_001130438.3(SPTAN1):c.3912C>T (p.Pro1304=) rs143844598 0.00046
NM_001130438.3(SPTAN1):c.6159C>T (p.His2053=) rs150902677 0.00046
NM_001130438.3(SPTAN1):c.7233C>T (p.Ser2411=) rs138985089 0.00041
NM_001130438.3(SPTAN1):c.4580A>G (p.Asn1527Ser) rs145038571 0.00038
NM_001130438.3(SPTAN1):c.2753A>G (p.Tyr918Cys) rs138275607 0.00033
NM_001130438.3(SPTAN1):c.7319G>A (p.Arg2440Gln) rs141980692 0.00029
NM_001130438.3(SPTAN1):c.3042T>G (p.Gly1014=) rs150870424 0.00028
NM_001130438.3(SPTAN1):c.4595+4G>T rs185925523 0.00026
NM_001130438.3(SPTAN1):c.2025T>C (p.Arg675=) rs145870898 0.00024
NM_001130438.3(SPTAN1):c.3235C>G (p.Leu1079Val) rs559839676 0.00019
NM_001130438.3(SPTAN1):c.505-14T>C rs372907681 0.00019
NM_001130438.3(SPTAN1):c.6190G>A (p.Ala2064Thr) rs201411901 0.00009
NM_001130438.3(SPTAN1):c.2233C>A (p.Gln745Lys) rs769094437 0.00008
NM_001130438.3(SPTAN1):c.6081C>T (p.Asp2027=) rs150801649 0.00008
NM_001130438.3(SPTAN1):c.6763C>T (p.Arg2255Cys) rs372779649 0.00008
NM_001130438.3(SPTAN1):c.-3-18C>T rs368470565 0.00004
NM_001130438.3(SPTAN1):c.5340C>T (p.Asp1780=) rs549528366 0.00003
NM_001130438.3(SPTAN1):c.2985C>T (p.Thr995=) rs777441722 0.00002
NM_001130438.3(SPTAN1):c.6133A>G (p.Lys2045Glu) rs753515426 0.00002
NM_001130438.3(SPTAN1):c.6726G>A (p.Glu2242=) rs745750589 0.00002
NM_001130438.3(SPTAN1):c.4595+9C>T rs771798239 0.00001
NM_001130438.3(SPTAN1):c.1086-220dup rs11464671
NM_001130438.3(SPTAN1):c.1221+115T>C rs1890103
NM_001130438.3(SPTAN1):c.1222-226C>G rs76220061
NM_001130438.3(SPTAN1):c.1462-293_1462-292del rs1491457137
NM_001130438.3(SPTAN1):c.1462-294del rs11429372
NM_001130438.3(SPTAN1):c.1462-294dup rs11429372
NM_001130438.3(SPTAN1):c.1572+208A>T rs12002906
NM_001130438.3(SPTAN1):c.1573-145del rs5900808
NM_001130438.3(SPTAN1):c.2560+189dup rs11382658
NM_001130438.3(SPTAN1):c.2778+71_2778+73del rs150632298
NM_001130438.3(SPTAN1):c.3007-189C>G rs10819420
NM_001130438.3(SPTAN1):c.3415-155C>T rs118026701
NM_001130438.3(SPTAN1):c.4046+241A>G rs7028880
NM_001130438.3(SPTAN1):c.4046+5G>A rs541570752
NM_001130438.3(SPTAN1):c.4492-20A>G rs944908728
NM_001130438.3(SPTAN1):c.5833-216del rs11444346
NM_001130438.3(SPTAN1):c.5833-216dup rs11444346
NM_001130438.3(SPTAN1):c.5833-226_5833-216del rs11444346
NM_001130438.3(SPTAN1):c.5833-227_5833-216del rs11444346
NM_001130438.3(SPTAN1):c.6498C>A (p.Arg2166=) rs72758823
NM_001130438.3(SPTAN1):c.651+37A>C rs2297769
NM_001130438.3(SPTAN1):c.6762+288T>G rs7852794
NM_001130438.3(SPTAN1):c.6763-6C>A rs543227930

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