ClinVar Miner

List of variants in gene SYNE2 reported as benign by Invitae

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Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 244
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HGVS dbSNP gnomAD frequency
NM_182914.3(SYNE2):c.8404A>G (p.Ser2802Gly) rs1890908 0.91221
NM_182914.3(SYNE2):c.7183G>A (p.Ala2395Thr) rs4027405 0.87610
NM_182914.3(SYNE2):c.6481C>T (p.Leu2161=) rs10151127 0.80823
NM_182914.3(SYNE2):c.7076G>A (p.Ser2359Asn) rs4027404 0.75629
NM_182914.3(SYNE2):c.9757G>C (p.Asp3253His) rs8010911 0.72882
NM_182914.3(SYNE2):c.6851C>T (p.Ala2284Val) rs4027402 0.72784
NM_182914.3(SYNE2):c.5906T>C (p.Met1969Thr) rs4902264 0.72634
NM_182914.3(SYNE2):c.8824A>G (p.Ile2942Val) rs3829767 0.71158
NM_182914.3(SYNE2):c.20062-119G>C rs1152588 0.66235
NM_182914.3(SYNE2):c.15556C>A (p.Leu5186Met) rs10151658 0.56664
NM_182914.3(SYNE2):c.80-12732A>T rs12878312 0.53695
NM_182914.3(SYNE2):c.19333+5C>T rs1152590 0.50736
NM_182914.3(SYNE2):c.17938T>C (p.Leu5980=) rs2256191 0.47326
NM_182914.3(SYNE2):c.15543C>T (p.Ile5181=) rs11629287 0.40212
NM_182914.3(SYNE2):c.17202C>A (p.Leu5734=) rs7161192 0.33500
NM_182914.3(SYNE2):c.4578-4T>A rs7146588 0.30679
NM_182914.3(SYNE2):c.19857G>T (p.Leu6619=) rs35648226 0.24610
NM_182914.3(SYNE2):c.399G>C (p.Leu133=) rs33976862 0.11557
NM_182914.3(SYNE2):c.11613A>G (p.Val3871=) rs17101637 0.10790
NM_182914.3(SYNE2):c.14844-5G>C rs17825431 0.10335
NM_182914.3(SYNE2):c.1721T>C (p.Ile574Thr) rs9944035 0.08879
NM_182914.3(SYNE2):c.12001T>C (p.Trp4001Arg) rs2792205 0.08782
NM_182914.3(SYNE2):c.6865T>C (p.Leu2289=) rs11850509 0.08174
NM_182914.3(SYNE2):c.9389A>G (p.Asn3130Ser) rs11847087 0.07400
NM_182914.3(SYNE2):c.11794-17C>T rs10137916 0.07337
NM_182914.3(SYNE2):c.12609+16T>C rs8015551 0.05151
NM_182914.3(SYNE2):c.4177C>T (p.Arg1393Trp) rs17751301 0.04972
NM_182914.3(SYNE2):c.16722A>G (p.Gln5574=) rs17101704 0.04797
NM_182914.3(SYNE2):c.2314-20A>G rs17101523 0.04363
NM_182914.3(SYNE2):c.14776T>C (p.Leu4926=) rs8007874 0.04106
NM_182914.3(SYNE2):c.7040C>A (p.Ala2347Glu) rs34625768 0.03914
NM_182914.3(SYNE2):c.7075A>G (p.Ser2359Gly) rs7157465 0.03914
NM_182914.3(SYNE2):c.4536A>G (p.Thr1512=) rs11158524 0.03853
NM_182914.3(SYNE2):c.14737G>A (p.Glu4913Lys) rs12881815 0.03757
NM_182914.3(SYNE2):c.14734C>G (p.Pro4912Ala) rs17766354 0.03286
NM_182914.3(SYNE2):c.3559A>C (p.Ile1187Leu) rs57259697 0.03281
NM_182914.3(SYNE2):c.2409C>A (p.Ser803=) rs17101525 0.03277
NM_182914.3(SYNE2):c.10567A>C (p.Lys3523Gln) rs35203186 0.03124
NM_182914.3(SYNE2):c.13423-7C>G rs7140414 0.03110
NM_182914.3(SYNE2):c.9078A>T (p.Glu3026Asp) rs34843668 0.02941
NM_182914.3(SYNE2):c.7690A>G (p.Ile2564Val) rs11628107 0.02936
NM_182914.3(SYNE2):c.12840+8T>C rs145218296 0.02317
NM_182914.3(SYNE2):c.12626T>C (p.Ile4209Thr) rs61747118 0.02309
NM_182914.3(SYNE2):c.13254C>A (p.Asn4418Lys) rs36021513 0.02290
NM_182914.3(SYNE2):c.13918-16G>A rs61987278 0.02270
NM_182914.3(SYNE2):c.11385G>A (p.Lys3795=) rs34954189 0.02196
NM_182914.3(SYNE2):c.8422C>T (p.Leu2808=) rs35960129 0.02175
NM_182914.3(SYNE2):c.1296C>A (p.Ser432Arg) rs35554503 0.02006
NM_182914.3(SYNE2):c.17556+4T>C rs2297301 0.01974
NM_182914.3(SYNE2):c.12122G>A (p.Arg4041His) rs17101661 0.01834
NM_182914.3(SYNE2):c.10269C>G (p.Ile3423Met) rs35920722 0.01612
NM_182914.3(SYNE2):c.8597C>T (p.Thr2866Met) rs114508894 0.01330
NM_182914.3(SYNE2):c.10196G>A (p.Arg3399His) rs36039501 0.01281
NM_182914.3(SYNE2):c.13266G>A (p.Gln4422=) rs34944385 0.01230
NM_182914.3(SYNE2):c.9023T>C (p.Ile3008Thr) rs115969845 0.01198
NM_182914.3(SYNE2):c.15794T>C (p.Val5265Ala) rs142660236 0.01196
NM_182914.3(SYNE2):c.14197C>A (p.Pro4733Thr) rs75568433 0.01070
NM_182914.3(SYNE2):c.16639G>A (p.Asp5547Asn) rs17179194 0.00998
NM_182914.3(SYNE2):c.19639A>G (p.Ile6547Val) rs45453691 0.00993
NM_182914.3(SYNE2):c.13280+3A>G rs113145581 0.00911
NM_182914.3(SYNE2):c.5187T>A (p.His1729Gln) rs116597541 0.00866
NM_182914.3(SYNE2):c.16305G>A (p.Leu5435=) rs116758464 0.00817
NM_182914.3(SYNE2):c.13023+18A>G rs147292814 0.00738
NM_182914.3(SYNE2):c.14020-15T>C rs142777639 0.00734
NM_182914.3(SYNE2):c.12596A>G (p.Asn4199Ser) rs35223918 0.00691
NM_182914.3(SYNE2):c.1482G>A (p.Leu494=) rs117567094 0.00640
NM_182914.3(SYNE2):c.2934A>G (p.Glu978=) rs34001379 0.00630
NM_182914.3(SYNE2):c.5517A>T (p.Leu1839Phe) rs35883188 0.00626
NM_182914.3(SYNE2):c.14057A>G (p.Glu4686Gly) rs10133691 0.00624
NM_182914.3(SYNE2):c.15256C>T (p.His5086Tyr) rs2039475 0.00622
NM_182914.3(SYNE2):c.2026A>G (p.Lys676Glu) rs78191145 0.00610
NM_182914.3(SYNE2):c.15793-19G>A rs4027394 0.00607
NM_182914.3(SYNE2):c.7643+9A>G rs115809466 0.00602
NM_182914.3(SYNE2):c.14430A>G (p.Thr4810=) rs34248042 0.00566
NM_182914.3(SYNE2):c.16522T>A (p.Ser5508Thr) rs35190322 0.00565
NM_182914.3(SYNE2):c.13708-14C>A rs11850329 0.00564
NM_182914.3(SYNE2):c.888+17A>G rs141247973 0.00534
NM_182914.3(SYNE2):c.17561T>C (p.Leu5854Pro) rs117070973 0.00528
NM_182914.3(SYNE2):c.12378C>T (p.Ser4126=) rs36007735 0.00524
NM_182914.3(SYNE2):c.5156T>C (p.Met1719Thr) rs73277546 0.00523
NM_182914.3(SYNE2):c.20103G>A (p.Ala6701=) rs75079588 0.00522
NM_182914.3(SYNE2):c.7096T>C (p.Ser2366Pro) rs35444312 0.00513
NM_182914.3(SYNE2):c.12612C>T (p.Gly4204=) rs114604397 0.00503
NM_182914.3(SYNE2):c.2803T>C (p.Leu935=) rs114718315 0.00474
NM_182914.3(SYNE2):c.7162G>A (p.Glu2388Lys) rs200842904 0.00462
NM_182914.3(SYNE2):c.1570-19T>C rs186882913 0.00461
NM_182914.3(SYNE2):c.6321C>T (p.Ser2107=) rs143410137 0.00434
NM_182914.3(SYNE2):c.16420T>A (p.Ser5474Thr) rs114483901 0.00399
NM_182914.3(SYNE2):c.7469T>G (p.Val2490Gly) rs34393543 0.00399
NM_182914.3(SYNE2):c.11671-4C>A rs193068394 0.00349
NM_182914.3(SYNE2):c.9502A>G (p.Ile3168Val) rs193035848 0.00349
NM_182914.3(SYNE2):c.19458C>T (p.Pro6486=) rs144593270 0.00343
NM_182914.3(SYNE2):c.6714+3G>A rs142902034 0.00337
NM_182914.3(SYNE2):c.11379T>C (p.Leu3793=) rs149391344 0.00319
NM_182914.3(SYNE2):c.20117G>A (p.Arg6706Gln) rs35831865 0.00309
NM_182914.3(SYNE2):c.20596C>T (p.Leu6866=) rs141474837 0.00289
NM_182914.3(SYNE2):c.10510A>G (p.Thr3504Ala) rs190518140 0.00287
NM_182914.3(SYNE2):c.12984A>G (p.Lys4328=) rs151314114 0.00255
NM_182914.3(SYNE2):c.10835A>G (p.Gln3612Arg) rs78110192 0.00249
NM_182914.3(SYNE2):c.15160-18A>G rs148916979 0.00236
NM_182914.3(SYNE2):c.6880-5C>T rs187173455 0.00235
NM_182914.3(SYNE2):c.16743G>A (p.Thr5581=) rs138769395 0.00232
NM_182914.3(SYNE2):c.20382+9A>G rs116394628 0.00230
NM_182914.3(SYNE2):c.16095-10G>A rs139126909 0.00225
NM_182914.3(SYNE2):c.11935C>G (p.Leu3979Val) rs76576553 0.00220
NM_182914.3(SYNE2):c.5395T>C (p.Leu1799=) rs186427714 0.00207
NM_182914.3(SYNE2):c.4521A>G (p.Gln1507=) rs187183308 0.00204
NM_182914.3(SYNE2):c.18039-5T>A rs189611387 0.00199
NM_182914.3(SYNE2):c.20197G>A (p.Glu6733Lys) rs150172232 0.00181
NM_182914.3(SYNE2):c.4286T>C (p.Leu1429Pro) rs150573158 0.00180
NM_182914.3(SYNE2):c.430C>G (p.Leu144Val) rs142000273 0.00180
NM_182914.3(SYNE2):c.8041G>A (p.Val2681Ile) rs150946074 0.00178
NM_182914.3(SYNE2):c.1648+18C>T rs150953678 0.00172
NM_182914.3(SYNE2):c.7898A>G (p.Asn2633Ser) rs190582637 0.00157
NM_182914.3(SYNE2):c.13918-10T>C rs184683378 0.00145
NM_182914.3(SYNE2):c.16065C>A (p.Ile5355=) rs36002764 0.00137
NM_182914.3(SYNE2):c.17388C>T (p.Pro5796=) rs35744699 0.00133
NM_182914.3(SYNE2):c.15445C>T (p.Arg5149Cys) rs143088941 0.00127
NM_182914.3(SYNE2):c.7606A>G (p.Met2536Val) rs201406395 0.00127
NM_182914.3(SYNE2):c.19334-15A>G rs200114629 0.00116
NM_182914.3(SYNE2):c.19581A>C (p.Lys6527Asn) rs141550472 0.00111
NM_182914.3(SYNE2):c.12108+10T>C rs184130759 0.00106
NM_182914.3(SYNE2):c.1724A>G (p.Tyr575Cys) rs181140390 0.00102
NM_182914.3(SYNE2):c.15006C>T (p.Ser5002=) rs143686889 0.00101
NM_182914.3(SYNE2):c.12346G>A (p.Glu4116Lys) rs140028745 0.00100
NM_182914.3(SYNE2):c.12459C>T (p.Asp4153=) rs143766835 0.00098
NM_182914.3(SYNE2):c.3318G>A (p.Lys1106=) rs374026048 0.00096
NM_182914.3(SYNE2):c.20383-13G>A rs118059639 0.00094
NM_182914.3(SYNE2):c.9347A>G (p.Lys3116Arg) rs138689053 0.00094
NM_182914.3(SYNE2):c.7124T>C (p.Leu2375Pro) rs111902869 0.00091
NM_182914.3(SYNE2):c.165C>T (p.Ser55=) rs143451415 0.00088
NM_182914.3(SYNE2):c.4842C>T (p.Pro1614=) rs148564084 0.00088
NM_182914.3(SYNE2):c.5451A>G (p.Gln1817=) rs116369229 0.00088
NM_182914.3(SYNE2):c.6690C>T (p.His2230=) rs138272705 0.00087
NM_182914.3(SYNE2):c.3353+18A>G rs184549776 0.00080
NM_182914.3(SYNE2):c.18723+17C>G rs2275013 0.00078
NM_182914.3(SYNE2):c.10697+16A>C rs182397773 0.00072
NM_182914.3(SYNE2):c.889-16T>C rs373852012 0.00072
NM_182914.3(SYNE2):c.5637+12A>G rs150233714 0.00068
NM_182914.3(SYNE2):c.20191-13T>C rs376369806 0.00065
NM_182914.3(SYNE2):c.3990G>A (p.Ala1330=) rs374980509 0.00064
NM_182914.3(SYNE2):c.15822A>T (p.Ser5274=) rs184241655 0.00055
NM_182914.3(SYNE2):c.16591C>A (p.Pro5531Thr) rs145036293 0.00051
NM_182914.3(SYNE2):c.15021C>T (p.Ala5007=) rs148113884 0.00046
NM_182914.3(SYNE2):c.6366G>A (p.Gln2122=) rs114297937 0.00044
NM_182914.3(SYNE2):c.12987C>T (p.Val4329=) rs139436206 0.00042
NM_182914.3(SYNE2):c.14528T>A (p.Phe4843Tyr) rs141488398 0.00042
NM_182914.3(SYNE2):c.18723+8C>T rs200853043 0.00041
NM_182914.3(SYNE2):c.16419C>T (p.His5473=) rs138209076 0.00036
NM_182914.3(SYNE2):c.20583G>A (p.Leu6861=) rs146695165 0.00036
NM_182914.3(SYNE2):c.276C>T (p.Ile92=) rs575263745 0.00034
NM_182914.3(SYNE2):c.5534A>G (p.Lys1845Arg) rs76634907 0.00032
NM_182914.3(SYNE2):c.19861-13C>G rs369096632 0.00031
NM_182914.3(SYNE2):c.20497G>A (p.Glu6833Lys) rs58154675 0.00030
NM_182914.3(SYNE2):c.12043T>C (p.Tyr4015His) rs75665958 0.00029
NM_182914.3(SYNE2):c.12307-5T>C rs374468002 0.00029
NM_182914.3(SYNE2):c.7128A>G (p.Pro2376=) rs117423703 0.00029
NM_182914.3(SYNE2):c.7467G>C (p.Leu2489Phe) rs143031135 0.00029
NM_182914.3(SYNE2):c.590+12G>T rs369874545 0.00028
NM_182914.3(SYNE2):c.20424G>A (p.Ser6808=) rs187841473 0.00027
NM_182914.3(SYNE2):c.15180G>A (p.Pro5060=) rs139006816 0.00026
NM_182914.3(SYNE2):c.18603G>A (p.Arg6201=) rs141051652 0.00026
NM_182914.3(SYNE2):c.6714+6G>T rs191541575 0.00026
NM_182914.3(SYNE2):c.990+10A>G rs145924910 0.00026
NM_182914.3(SYNE2):c.11023-5C>G rs112833938 0.00025
NM_182914.3(SYNE2):c.14823T>C (p.Ala4941=) rs552871021 0.00024
NM_182914.3(SYNE2):c.14720C>T (p.Ala4907Val) rs144804554 0.00023
NM_182914.3(SYNE2):c.12190G>A (p.Val4064Ile) rs144164967 0.00021
NM_182914.3(SYNE2):c.19194C>T (p.Ala6398=) rs144599409 0.00021
NM_182914.3(SYNE2):c.13918-6T>C rs187859624 0.00020
NM_182914.3(SYNE2):c.8007C>A (p.Thr2669=) rs368090941 0.00019
NM_182914.3(SYNE2):c.16405C>A (p.Pro5469Thr) rs148492034 0.00018
NM_182914.3(SYNE2):c.19161G>A (p.Pro6387=) rs780548007 0.00017
NM_182914.3(SYNE2):c.4413C>A (p.Ile1471=) rs377423642 0.00015
NM_182914.3(SYNE2):c.19867C>T (p.Leu6623=) rs139826953 0.00014
NM_182914.3(SYNE2):c.2013G>A (p.Leu671=) rs371320284 0.00014
NM_182914.3(SYNE2):c.20286T>C (p.Cys6762=) rs77065534 0.00014
NM_182914.3(SYNE2):c.14634T>A (p.Ile4878=) rs779163537 0.00012
NM_182914.3(SYNE2):c.2190A>G (p.Thr730=) rs374751877 0.00012
NM_182914.3(SYNE2):c.12771G>A (p.Val4257=) rs556280812 0.00009
NM_182914.3(SYNE2):c.18541-13C>G rs374563436 0.00009
NM_182914.3(SYNE2):c.9396G>C (p.Lys3132Asn) rs566182360 0.00009
NM_182914.3(SYNE2):c.17538C>T (p.Asn5846=) rs367757065 0.00008
NM_182914.3(SYNE2):c.18264C>T (p.Asp6088=) rs182985921 0.00008
NM_182914.3(SYNE2):c.3326G>A (p.Ser1109Asn) rs150464227 0.00007
NM_182914.3(SYNE2):c.10582C>G (p.Leu3528Val) rs374649578 0.00006
NM_182914.3(SYNE2):c.15720A>C (p.Ala5240=) rs370147066 0.00006
NM_182914.3(SYNE2):c.19185T>C (p.His6395=) rs146775592 0.00006
NM_182914.3(SYNE2):c.397C>T (p.Leu133=) rs750150695 0.00006
NM_182914.3(SYNE2):c.4785C>A (p.Asn1595Lys) rs199704293 0.00006
NM_182914.3(SYNE2):c.10867-19A>G rs367619083 0.00005
NM_182914.3(SYNE2):c.19962C>G (p.Leu6654=) rs139326092 0.00005
NM_182914.3(SYNE2):c.13308C>T (p.Asp4436=) rs201277635 0.00004
NM_182914.3(SYNE2):c.13918-17C>T rs201636300 0.00004
NM_182914.3(SYNE2):c.17892C>T (p.Asn5964=) rs201827003 0.00004
NM_182914.3(SYNE2):c.3054A>C (p.Leu1018=) rs751740731 0.00004
NM_182914.3(SYNE2):c.5637+13T>A rs138898760 0.00004
NM_182914.3(SYNE2):c.8967C>T (p.Thr2989=) rs781153107 0.00004
NM_182914.3(SYNE2):c.13689C>T (p.Gly4563=) rs186567969 0.00003
NM_182914.3(SYNE2):c.14044C>T (p.Leu4682=) rs184218195 0.00003
NM_182914.3(SYNE2):c.5958G>A (p.Lys1986=) rs747338096 0.00003
NM_182914.3(SYNE2):c.4614A>G (p.Lys1538=) rs572672283 0.00002
NM_182914.3(SYNE2):c.14941T>C (p.Leu4981=) rs376940871 0.00001
NM_182914.3(SYNE2):c.15624G>A (p.Leu5208=) rs371688900 0.00001
NM_182914.3(SYNE2):c.15921G>T (p.Val5307=) rs555313966 0.00001
NM_182914.3(SYNE2):c.2487A>G (p.Lys829=) rs751368683 0.00001
NM_182914.3(SYNE2):c.5608A>C (p.Ser1870Arg) rs368227332 0.00001
NM_182914.3(SYNE2):c.9366A>G (p.Gln3122=) rs369128922 0.00001
NM_182914.3(SYNE2):c.9974C>T (p.Ala3325Val) rs377173620 0.00001
NM_182914.3(SYNE2):c.11187A>G (p.Leu3729=) rs202139207
NM_182914.3(SYNE2):c.11340G>A (p.Leu3780=)
NM_182914.3(SYNE2):c.11944A>C (p.Asn3982His) rs10137972
NM_182914.3(SYNE2):c.12001_12002delinsGT (p.Trp4001Val)
NM_182914.3(SYNE2):c.12382-14G>T rs77622144
NM_182914.3(SYNE2):c.1293+18dup
NM_182914.3(SYNE2):c.13024-5dup rs2153665783
NM_182914.3(SYNE2):c.13707+10T>C rs61987277
NM_182914.3(SYNE2):c.14514+20G>A
NM_182914.3(SYNE2):c.15290TTC[1] (p.Leu5098del) rs368230785
NM_182914.3(SYNE2):c.16479+15T>G rs80199180
NM_182914.3(SYNE2):c.16906-16T>C
NM_182914.3(SYNE2):c.17236-6dup rs763046539
NM_182914.3(SYNE2):c.19658-17C>T
NM_182914.3(SYNE2):c.19658-9dup
NM_182914.3(SYNE2):c.2002-6G>A
NM_182914.3(SYNE2):c.20062-4dup
NM_182914.3(SYNE2):c.20339G>A (p.Arg6780Gln) rs202240664
NM_182914.3(SYNE2):c.20634C>A (p.Ser6878=) rs143162390
NM_182914.3(SYNE2):c.2070A>G (p.Leu690=) rs79037871
NM_182914.3(SYNE2):c.20718C>A (p.Pro6906=) rs547101639
NM_182914.3(SYNE2):c.2841A>G (p.Gly947=)
NM_182914.3(SYNE2):c.3353+18del
NM_182914.3(SYNE2):c.4266C>T (p.Phe1422=)
NM_182914.3(SYNE2):c.4383A>G (p.Pro1461=)
NM_182914.3(SYNE2):c.5525-11del rs769496095
NM_182914.3(SYNE2):c.5525-11dup
NM_182914.3(SYNE2):c.6604T>A (p.Leu2202Ile) rs571868188
NM_182914.3(SYNE2):c.7074_7075inv (p.Ser2359Gly)
NM_182914.3(SYNE2):c.7643+16T>C
NM_182914.3(SYNE2):c.79+19G>A
NM_182914.3(SYNE2):c.8808T>C (p.Asn2936=)
NM_182914.3(SYNE2):c.990+14dup rs754502584
NM_182914.3(SYNE2):c.990+18C>T
NM_182914.3(SYNE2):c.9926A>G (p.His3309Arg) rs8010699

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