List of variants in gene TRAPPC9 reported as uncertain significance by Ambry Genetics

Minimum submission review status:		Collection method:
Minimum conflict level: Report conflict between different conditions
Gene type: Distinguish antisense genes from sense genes
Show significances as they were submitted (without aggregation into standard terms)
		ClinVar version:

Total variants: 106

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HGVS	dbSNP	gnomAD frequency
NM_001160372.4(TRAPPC9):c.3421G>A (p.Val1141Met)	rs140157207	0.00147
NM_001160372.4(TRAPPC9):c.3157C>T (p.Arg1053Cys)	rs147499593	0.00144
NM_001160372.4(TRAPPC9):c.3149G>A (p.Arg1050Gln)	rs111768745	0.00103
NM_001160372.4(TRAPPC9):c.3414T>G (p.Ser1138Arg)	rs147127279	0.00089
NM_001160372.4(TRAPPC9):c.263C>T (p.Ser88Leu)	rs139631202	0.00072
NM_001160372.4(TRAPPC9):c.2671A>C (p.Thr891Pro)	rs562249191	0.00066
NM_001160372.4(TRAPPC9):c.2794G>A (p.Ala932Thr)	rs148909256	0.00058
NM_001160372.4(TRAPPC9):c.1019C>T (p.Ala340Val)	rs143778652	0.00056
NM_001160372.4(TRAPPC9):c.853C>T (p.Arg285Trp)	rs141441030	0.00045
NM_001160372.4(TRAPPC9):c.44C>T (p.Thr15Met)	rs142839408	0.00043
NM_001160372.4(TRAPPC9):c.814C>A (p.Gln272Lys)	rs144569575	0.00040
NM_001160372.4(TRAPPC9):c.2681G>A (p.Ser894Asn)	rs34181302	0.00029
NM_001160372.4(TRAPPC9):c.2077G>A (p.Ala693Thr)	rs147044768	0.00026
NM_001160372.4(TRAPPC9):c.140G>A (p.Arg47Gln)	rs147182402	0.00024
NM_001160372.4(TRAPPC9):c.1628T>C (p.Val543Ala)	rs200886297	0.00024
NM_001160372.4(TRAPPC9):c.3211G>A (p.Gly1071Ser)	rs200963473	0.00014
NM_031466.8(TRAPPC9):c.-74C>A	rs139214686	0.00011
NM_001160372.4(TRAPPC9):c.2882C>T (p.Ala961Val)	rs769398594	0.00010
NM_001160372.4(TRAPPC9):c.940G>A (p.Ala314Thr)	rs762765901	0.00010
NM_001160372.4(TRAPPC9):c.136G>A (p.Val46Met)	rs201233141	0.00009
NM_031466.8(TRAPPC9):c.-24G>A	rs370984854	0.00009
NM_001160372.4(TRAPPC9):c.3220A>G (p.Asn1074Asp)	rs762135474	0.00007
NM_001160372.4(TRAPPC9):c.1196G>A (p.Gly399Asp)	rs376272150	0.00006
NM_001160372.4(TRAPPC9):c.2827G>C (p.Asp943His)	rs144046998	0.00006
NM_001160372.4(TRAPPC9):c.1352-5C>T	rs376013888	0.00004
NM_001160372.4(TRAPPC9):c.2704C>T (p.Arg902Trp)	rs370626310	0.00004
NM_001160372.4(TRAPPC9):c.2811-4G>A	rs374826041	0.00004
NM_001160372.4(TRAPPC9):c.2811-5C>T	rs534788967	0.00004
NM_001160372.4(TRAPPC9):c.3056A>C (p.Asp1019Ala)	rs755371528	0.00004
NM_001160372.4(TRAPPC9):c.3088G>A (p.Glu1030Lys)	rs766920866	0.00004
NM_001160372.4(TRAPPC9):c.76G>A (p.Val26Ile)	rs376505164	0.00004
NM_001160372.4(TRAPPC9):c.3013C>A (p.Gln1005Lys)	rs913893905	0.00003
NM_001160372.4(TRAPPC9):c.805C>T (p.Arg269Trp)	rs779077167	0.00003
NM_001160372.4(TRAPPC9):c.2705G>A (p.Arg902Gln)	rs768169759	0.00002
NM_001160372.4(TRAPPC9):c.902A>G (p.Asn301Ser)	rs779620347	0.00002
NM_001160372.4(TRAPPC9):c.1184A>G (p.Tyr395Cys)	rs370310318	0.00001
NM_001160372.4(TRAPPC9):c.1524G>C (p.Glu508Asp)	rs754444715	0.00001
NM_001160372.4(TRAPPC9):c.1870G>A (p.Gly624Arg)	rs772315237	0.00001
NM_001160372.4(TRAPPC9):c.1988A>G (p.His663Arg)	rs200557642	0.00001
NM_001160372.4(TRAPPC9):c.2622G>T (p.Arg874Ser)	rs202169819	0.00001
NM_001160372.4(TRAPPC9):c.3158G>A (p.Arg1053His)	rs369074996	0.00001
NM_001160372.4(TRAPPC9):c.52G>A (p.Val18Met)	rs759083867	0.00001
NM_001160372.4(TRAPPC9):c.-4C>A	rs1284713164
NM_001160372.4(TRAPPC9):c.1005C>G (p.Ser335Arg)
NM_001160372.4(TRAPPC9):c.1013A>T (p.Lys338Met)
NM_001160372.4(TRAPPC9):c.1069A>G (p.Ile357Val)
NM_001160372.4(TRAPPC9):c.1109A>G (p.Asn370Ser)
NM_001160372.4(TRAPPC9):c.1170C>G (p.Ile390Met)
NM_001160372.4(TRAPPC9):c.1226G>A (p.Arg409His)
NM_001160372.4(TRAPPC9):c.1234G>T (p.Ala412Ser)
NM_001160372.4(TRAPPC9):c.1262C>T (p.Ala421Val)
NM_001160372.4(TRAPPC9):c.1337A>G (p.Lys446Arg)
NM_001160372.4(TRAPPC9):c.1352-4G>A
NM_001160372.4(TRAPPC9):c.1355C>A (p.Thr452Lys)
NM_001160372.4(TRAPPC9):c.1355C>T (p.Thr452Met)
NM_001160372.4(TRAPPC9):c.1538A>G (p.Lys513Arg)
NM_001160372.4(TRAPPC9):c.1618G>A (p.Val540Ile)
NM_001160372.4(TRAPPC9):c.1642C>A (p.Leu548Ile)
NM_001160372.4(TRAPPC9):c.1654C>T (p.Leu552Phe)
NM_001160372.4(TRAPPC9):c.1732G>A (p.Ala578Thr)
NM_001160372.4(TRAPPC9):c.1911G>A (p.Pro637=)	rs148353187
NM_001160372.4(TRAPPC9):c.1942G>A (p.Val648Ile)
NM_001160372.4(TRAPPC9):c.1958C>T (p.Thr653Met)
NM_001160372.4(TRAPPC9):c.1981G>A (p.Gly661Ser)
NM_001160372.4(TRAPPC9):c.1994C>T (p.Thr665Met)
NM_001160372.4(TRAPPC9):c.2020T>A (p.Leu674Met)
NM_001160372.4(TRAPPC9):c.2032C>G (p.Leu678Val)	rs1563915700
NM_001160372.4(TRAPPC9):c.2144G>A (p.Gly715Asp)
NM_001160372.4(TRAPPC9):c.2192G>A (p.Ser731Asn)
NM_001160372.4(TRAPPC9):c.2283A>C (p.Lys761Asn)
NM_001160372.4(TRAPPC9):c.2307G>T (p.Trp769Cys)
NM_001160372.4(TRAPPC9):c.2482G>A (p.Val828Ile)
NM_001160372.4(TRAPPC9):c.2485C>T (p.Arg829Trp)
NM_001160372.4(TRAPPC9):c.2521G>A (p.Glu841Lys)
NM_001160372.4(TRAPPC9):c.2525G>A (p.Ser842Asn)
NM_001160372.4(TRAPPC9):c.2584T>C (p.Tyr862His)
NM_001160372.4(TRAPPC9):c.265G>A (p.Ala89Thr)
NM_001160372.4(TRAPPC9):c.2675G>C (p.Arg892Pro)
NM_001160372.4(TRAPPC9):c.2690C>A (p.Pro897Gln)
NM_001160372.4(TRAPPC9):c.271G>A (p.Asp91Asn)
NM_001160372.4(TRAPPC9):c.2728G>A (p.Val910Ile)
NM_001160372.4(TRAPPC9):c.2743G>A (p.Glu915Lys)
NM_001160372.4(TRAPPC9):c.2800G>A (p.Glu934Lys)
NM_001160372.4(TRAPPC9):c.2852C>T (p.Pro951Leu)
NM_001160372.4(TRAPPC9):c.3041C>T (p.Ala1014Val)
NM_001160372.4(TRAPPC9):c.3067G>T (p.Asp1023Tyr)
NM_001160372.4(TRAPPC9):c.3124C>T (p.Arg1042Cys)
NM_001160372.4(TRAPPC9):c.3225C>A (p.Tyr1075Ter)	rs58740567
NM_001160372.4(TRAPPC9):c.3249C>G (p.Phe1083Leu)
NM_001160372.4(TRAPPC9):c.3257C>T (p.Ser1086Phe)
NM_001160372.4(TRAPPC9):c.3292G>A (p.Gly1098Ser)
NM_001160372.4(TRAPPC9):c.420C>G (p.Asp140Glu)
NM_001160372.4(TRAPPC9):c.457G>A (p.Glu153Lys)
NM_001160372.4(TRAPPC9):c.598C>T (p.Arg200Trp)
NM_001160372.4(TRAPPC9):c.616C>T (p.Arg206Trp)
NM_001160372.4(TRAPPC9):c.761T>G (p.Val254Gly)
NM_001160372.4(TRAPPC9):c.775C>T (p.Pro259Ser)
NM_001160372.4(TRAPPC9):c.838G>A (p.Ala280Thr)
NM_001160372.4(TRAPPC9):c.938G>T (p.Arg313Leu)
NM_001160372.4(TRAPPC9):c.949T>A (p.Cys317Ser)
NM_031466.8(TRAPPC9):c.-134G>T	rs1564040977
NM_031466.8(TRAPPC9):c.-162C>A
NM_031466.8(TRAPPC9):c.-212G>C
NM_031466.8(TRAPPC9):c.-231C>T
NM_031466.8(TRAPPC9):c.-68C>T
NM_031466.8(TRAPPC9):c.-69C>T

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