ClinVar Miner

List of intergenic variants reported by GeneDx

Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:
Total variants: 294
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HGVS dbSNP gnomAD frequency
NC_000003.12:g.49095877A>G rs9840050 0.65034
NC_000023.11:g.101832078G>C rs6616305 0.15922
NC_000004.12:g.122922970G>T rs58090513 0.04669
NC_000003.12:g.49104857C>A rs192250459 0.00275
GRCh37/hg19 13q11(chr13:19327344-19380812)x3
GRCh37/hg19 1q12-21.1(chr1:142594227-142642753)x1
GRCh37/hg19 1q21.1(chr1:142604414-142642753)x1
GRCh37/hg19 1q21.1(chr1:142604414-142642753)x3
GRCh37/hg19 1q21.1(chr1:142663112-142791662)x3
GRCh37/hg19 1q21.1(chr1:143134063-143284670)x3
GRCh37/hg19 1q21.1(chr1:143391916-143457097)x3
GRCh37/hg19 1q21.1(chr1:143400885-143504612)x3
GRCh37/hg19 1q21.1(chr1:143428345-143532171)x3
GRCh37/hg19 1q21.1(chr1:143441231-143518139)x3
GRCh37/hg19 1q21.1(chr1:143441231-143532171)x3
GRCh37/hg19 1q21.1(chr1:143457097-143532171)x3
GRCh37/hg19 1q21.1(chr1:143482388-143540851)x1
GRCh37/hg19 1q21.1(chr1:143504612-143540851)x3
GRCh37/hg19 1q21.2(chr1:148256138-148327665)x3
GRCh37/hg19 1q21.2(chr1:148256138-148345159)x3
GRCh37/hg19 1q44(chr1:244229113-244452045)x3
GRCh37/hg19 2q37.3(chr2:243088755-243175692)x3
GRCh37/hg19 8p23.3-23.2(chr8:2133991-2349876)x3
GRCh37/hg19 8p23.3-23.2(chr8:2158515-2308926)x3
GRCh37/hg19 Xp22.33(chrX:1035386-1199297)x1
GRCh37/hg19 Xp22.33(chrX:176426-677595)x3
GRCh37/hg19 Xp22.33(chrX:193483-571339)x3
GRCh37/hg19 Xp22.33(chrX:225816-809572)x3
GRCh37/hg19 Xp22.33(chrX:460130-1008586)x3
GRCh37/hg19 Xp22.33(chrX:524370-591887)x3
GRCh37/hg19 Xp22.33(chrX:535743-1712586)x1
GRCh37/hg19 Xp22.33(chrX:571286-920674)x1
GRCh37/hg19 Xp22.33(chrX:597797-643697)x3
GRCh37/hg19 Xp22.33(chrX:605776-1252566)x4
GRCh37/hg19 Xp22.33(chrX:614422-1347337)x3
GRCh37/hg19 Xp22.33(chrX:663566-943953)x1
GRCh37/hg19 Xp22.33(chrX:70297-1015886)x1
GRCh37/hg19 Xp22.33(chrX:974682-1252522)x3
GRCh37/hg19 Yp11.32(chrY:20297-716832)x1
GRCh37/hg19 Yp11.32(chrY:564422-1297337)x3
GRCh37/hg19 Yq12(chrY:58983344-58995640)x3
GRCh38/hg38 10q21.1(chr10:57420937-57605111)x3
GRCh38/hg38 10q25.1(chr10:105349304-105520966)x3
GRCh38/hg38 10q26.13(chr10:122751389-122777546)x1
GRCh38/hg38 10q26.2(chr10:126705578-126874970)x1
GRCh38/hg38 11q13.2(chr11:67806872-67875746)x3
GRCh38/hg38 11q14.1(chr11:80945608-81191865)x1
GRCh38/hg38 11q14.1(chr11:81426056-81507895)x1
GRCh38/hg38 11q21(chr11:94324359-94366689)x1
GRCh38/hg38 11q22.3(chr11:104772488-104831110)x3
GRCh38/hg38 11q25(chr11:133676308-133756534)x1
GRCh38/hg38 11q25(chr11:134511738-134576207)x1
GRCh38/hg38 12p12.1(chr12:25332877-25470270)x3
GRCh38/hg38 12p12.3(chr12:16041251-16088962)x1
GRCh38/hg38 12p12.3(chr12:16041251-16120196)x1
GRCh38/hg38 12q13.11(chr12:47570565-47647966)x4
GRCh38/hg38 12q14.1(chr12:59973621-60061113)x1
GRCh38/hg38 13q14.3(chr13:52219507-52319676)x3
GRCh38/hg38 13q14.3-21.1(chr13:54579853-54883578)x1
GRCh38/hg38 13q21.1(chr13:57219220-57298363)x1
GRCh38/hg38 13q21.33(chr13:68935249-69041580)x3
GRCh38/hg38 13q31.1(chr13:83947821-84116903)x1
GRCh38/hg38 13q31.1(chr13:86458967-86709682)x3
GRCh38/hg38 13q32.1(chr13:95311075-95364650)x3
GRCh38/hg38 13q33.1-33.2(chr13:104182206-104279609)x1
GRCh38/hg38 14q12(chr14:27754886-27787614)x3
GRCh38/hg38 14q13.1(chr14:34211771-34328059)x1
GRCh38/hg38 14q21.1(chr14:39966920-40122547)x1
GRCh38/hg38 14q21.1(chr14:40264666-40421739)x1
GRCh38/hg38 14q21.1(chr14:41378491-41593828)x1
GRCh38/hg38 14q21.1(chr14:42525760-42802470)x1
GRCh38/hg38 14q21.2(chr14:43387283-43754611)x3
GRCh38/hg38 14q21.2(chr14:43387283-43754611)x4
GRCh38/hg38 14q21.2(chr14:45352239-45510467)x1
GRCh38/hg38 14q21.3(chr14:48317570-48422383)x1
GRCh38/hg38 14q21.3(chr14:48317570-48437083)x1
GRCh38/hg38 15q26.1(chr15:93262301-93346577)x1
GRCh38/hg38 15q26.1(chr15:93607405-93674817)x1
GRCh38/hg38 15q26.1(chr15:93674817-93791360)x1
GRCh38/hg38 16p11.2(chr16:29714273-29727067)x1
GRCh38/hg38 16q21(chr16:60385204-60908929)x1
GRCh38/hg38 16q21(chr16:63433063-63540050)x1
GRCh38/hg38 17p11.2(chr17:18219346-18225106)x3
GRCh38/hg38 17p11.2(chr17:19601336-19632996)x0
GRCh38/hg38 17p11.2(chr17:19601336-19632996)x1
GRCh38/hg38 17p11.2(chr17:19601336-19642767)x1
GRCh38/hg38 17p12(chr17:14464946-14519690)x3
GRCh38/hg38 17p12(chr17:15776915-15793546)x1
GRCh38/hg38 17q11.2(chr17:27664946-27734947)x3
GRCh38/hg38 18p11.32(chr18:1664566-1783662)x3
GRCh38/hg38 18q22.1(chr18:66903229-67002069)x1
GRCh38/hg38 18q22.1(chr18:67981221-68105118)x1
GRCh38/hg38 19p13.3(chr19:127601-138477)x3
GRCh38/hg38 19p13.3(chr19:127601-156185)x3
GRCh38/hg38 1p21.1(chr1:106144193-106226813)x3
GRCh38/hg38 1p31.3(chr1:63685499-63710831)x1
GRCh38/hg38 1q31.1(chr1:187674895-187776567)x1
GRCh38/hg38 1q31.1(chr1:189460972-189593085)x1
GRCh38/hg38 1q41(chr1:215279453-215352725)x1
GRCh38/hg38 1q41-42.11(chr1:223891383-223992662)x3
GRCh38/hg38 1q43(chr1:238512952-238590128)x3
GRCh38/hg38 21q21.1(chr21:22354814-22461210)x1
GRCh38/hg38 21q21.2(chr21:23154277-23250240)x1
GRCh38/hg38 21q21.3(chr21:27839757-27986029)x1
GRCh38/hg38 22q11.21(chr22:19151514-19159891)x3
GRCh38/hg38 2p11.2(chr2:83577669-83827758)x3
GRCh38/hg38 2p12(chr2:82373086-82695888)x1
GRCh38/hg38 2p22.3(chr2:35299076-35395445)x1
GRCh38/hg38 2p22.3(chr2:35596740-35731555)x1
GRCh38/hg38 2p24.3(chr2:13066883-13197022)x3
GRCh38/hg38 2p24.3(chr2:13138650-13277869)x1
GRCh38/hg38 2p24.3(chr2:14041885-14138712)x3
GRCh38/hg38 2p25.3(chr2:50661-140943)x1
GRCh38/hg38 2q22.1(chr2:139601215-139787365)x1
GRCh38/hg38 2q32.1(chr2:186215422-186309002)x1
GRCh38/hg38 2q32.2(chr2:188607058-188721167)x3
GRCh38/hg38 3p12.2(chr3:81338924-81444516)x3
GRCh38/hg38 3p12.3(chr3:78482397-78571972)x1
GRCh38/hg38 3p22.3(chr3:35472057-35551788)x1
GRCh38/hg38 3p24.2(chr3:26019191-26196287)x1
GRCh38/hg38 3p24.2(chr3:26019191-26238094)x1
GRCh38/hg38 3p26.3(chr3:1780588-1939069)x1
GRCh38/hg38 3p26.3(chr3:1798595-1880775)x3
GRCh38/hg38 3p26.3(chr3:1880775-1920995)x1
GRCh38/hg38 3p26.3(chr3:427445-462035)x1
GRCh38/hg38 3q13.13(chr3:110477992-110859864)x1
GRCh38/hg38 3q13.31(chr3:116718201-116801214)x3
GRCh38/hg38 3q26.1(chr3:161717568-161802775)x1
GRCh38/hg38 3q26.1(chr3:164286799-164617339)x3
GRCh38/hg38 4p11(chr4:49161529-49200536)x3
GRCh38/hg38 4p11(chr4:49161529-49213521)x3
GRCh38/hg38 4p11(chr4:49161529-49235485)x3
GRCh38/hg38 4p15.1(chr4:33519132-33716358)x3
GRCh38/hg38 4p15.1(chr4:34366115-34526200)x1
GRCh38/hg38 4p16.3(chr4:4165045-4188320)x3
GRCh38/hg38 4q25(chr4:109355081-109404907)x1
GRCh38/hg38 4q26(chr4:115992538-116176261)x1
GRCh38/hg38 4q28.3(chr4:131834333-132170605)x1
GRCh38/hg38 4q32.1(chr4:157385121-157506916)x1
GRCh38/hg38 4q32.3(chr4:167400142-167555986)x3
GRCh38/hg38 4q32.3(chr4:167910776-168056380)x1
GRCh38/hg38 4q35.2(chr4:189324047-189388086)x3
GRCh38/hg38 5p12(chr5:45935267-46055335)x3
GRCh38/hg38 5p14.3(chr5:21288685-21377167)x3
GRCh38/hg38 5p14.3(chr5:21351725-21377167)x3
GRCh38/hg38 5p14.3(chr5:21402830-21527453)x1
GRCh38/hg38 5q14.3(chr5:85966055-86043040)x1
GRCh38/hg38 5q15(chr5:97716206-97741618)x1
GRCh38/hg38 5q15(chr5:97716206-97793969)x1
GRCh38/hg38 5q21.1(chr5:101222806-101572534)x3
GRCh38/hg38 5q21.1(chr5:99875465-99988993)x3
GRCh38/hg38 5q21.2-21.3(chr5:104996709-105137553)x1
GRCh38/hg38 5q21.3(chr5:105110013-105137553)x1
GRCh38/hg38 5q21.3(chr5:106443466-106530076)x1
GRCh38/hg38 5q22.2-22.3(chr5:113743389-113834452)x1
GRCh38/hg38 5q23.1(chr5:119693226-119799149)x3
GRCh38/hg38 5q35.3(chr5:180750527-180764645)x3
GRCh38/hg38 5q35.3(chr5:181382803-181448620)x3
GRCh38/hg38 5q35.3(chr5:181394958-181448620)x3
GRCh38/hg38 5q35.3(chr5:181425760-181448620)x3
GRCh38/hg38 6p22.1(chr6:29134533-29154904)x1
GRCh38/hg38 6p22.3(chr6:22309428-22390986)x1
GRCh38/hg38 6q11.1-11.2(chr6:62566683-62638936)x3
GRCh38/hg38 6q14.1(chr6:80863139-80990147)x3
GRCh38/hg38 6q15(chr6:91998071-92126735)x3
GRCh38/hg38 6q16.1(chr6:93778112-93876782)x0
GRCh38/hg38 6q16.3(chr6:104177975-104341827)x1
GRCh38/hg38 6q22.32-22.33(chr6:126793302-126881012)x1
GRCh38/hg38 7p12.1(chr7:52227381-52512934)x3
GRCh38/hg38 7p12.1(chr7:53404348-53515432)x1
GRCh38/hg38 7p14.3(chr7:32797513-32831789)x3
GRCh38/hg38 7p21.2(chr7:15002609-15099804)x1
GRCh38/hg38 7p21.3(chr7:13116890-13262814)x1
GRCh38/hg38 7p22.2(chr7:4334387-4480136)x3
GRCh38/hg38 7p22.3(chr7:46494-65558)x3
GRCh38/hg38 7q21.11(chr7:79708363-79763854)x3
GRCh38/hg38 7q31.1(chr7:113485224-113569777)x1
GRCh38/hg38 7q31.31(chr7:119226617-119385676)x1
GRCh38/hg38 7q31.31(chr7:119226617-119385676)x3
GRCh38/hg38 7q31.33(chr7:125538149-126150923)x3
GRCh38/hg38 7q31.33(chr7:125653070-125766034)x1
GRCh38/hg38 8p22(chr8:16383459-16495585)x1
GRCh38/hg38 8p23.2-23.1(chr8:6185679-6303909)x1
GRCh38/hg38 8q11.1(chr8:46042222-46827187)x1
GRCh38/hg38 8q21.2(chr8:83820378-84135153)x3
GRCh38/hg38 8q21.3(chr8:88661262-88820021)x1
GRCh38/hg38 8q24.13(chr8:121898735-122385841)x3
GRCh38/hg38 8q24.22(chr8:131483263-131554253)x3
GRCh38/hg38 8q24.3(chr8:139311194-139387068)x3
GRCh38/hg38 9p21.1(chr9:30424071-30520900)x1
GRCh38/hg38 9p21.2(chr9:26274520-26405994)x1
GRCh38/hg38 9p21.3(chr9:22212554-22326166)x1
GRCh38/hg38 9p21.3(chr9:24083478-24349365)x1
GRCh38/hg38 9p21.3(chr9:25259015-25346914)x1
GRCh38/hg38 9p21.3-21.2(chr9:25527397-25616021)x1
GRCh38/hg38 9p22.3(chr9:15310273-15378137)x1
GRCh38/hg38 9p22.3(chr9:15351275-15417031)x1
GRCh38/hg38 9p23(chr9:11298130-11530555)x1
GRCh38/hg38 9p23(chr9:11573531-11713632)x1
GRCh38/hg38 9p23(chr9:11573531-11868524)x1
GRCh38/hg38 9p23(chr9:11659296-11927681)x1
GRCh38/hg38 9p23(chr9:11713632-11868524)x1
GRCh38/hg38 9p23(chr9:11868524-11952522)x1
GRCh38/hg38 9p23(chr9:11868524-12007047)x1
GRCh38/hg38 9p23(chr9:11904249-11981564)x1
GRCh38/hg38 9p23(chr9:11927681-12007047)x1
GRCh38/hg38 9p24.3(chr9:1611053-1703711)x1
GRCh38/hg38 9q31.2(chr9:105935122-106247033)x3
GRCh38/hg38 Xp11.4-11.3(chrX:42471865-42582707)x1
GRCh38/hg38 Xp21.1(chrX:33577064-34060608)x2
GRCh38/hg38 Xp21.1(chrX:33638034-33690712)x3
GRCh38/hg38 Xp21.1(chrX:33878889-33990612)x1
GRCh38/hg38 Xp21.3(chrX:26237025-26327212)x2
GRCh38/hg38 Xp21.3(chrX:28234352-28286472)x3
GRCh38/hg38 Xp22.31(chrX:6542451-6634671)x2
GRCh38/hg38 Xp22.31(chrX:7463693-7564483)x1
GRCh38/hg38 Xp22.31(chrX:7480700-7835203)x3
GRCh38/hg38 Xp22.31(chrX:8176030-8216172)x2
GRCh38/hg38 Xp22.33(chrX:1674587-1823312)x3
GRCh38/hg38 Xp22.33(chrX:1674587-1898416)x3
GRCh38/hg38 Xp22.33(chrX:1674587-1947725)x3
GRCh38/hg38 Xp22.33(chrX:1691430-1807405)x3
GRCh38/hg38 Xp22.33(chrX:1691430-1947725)x3
GRCh38/hg38 Xp22.33(chrX:27245-270490)x1
GRCh38/hg38 Xp22.33(chrX:392358-426983)x1
GRCh38/hg38 Xp22.33(chrX:948314-1152369)x3
GRCh38/hg38 Xq11.1(chrX:62712219-62927396)x2
GRCh38/hg38 Xq11.1(chrX:62712219-62927396)x3
GRCh38/hg38 Xq11.1(chrX:62712219-62959030)x3
GRCh38/hg38 Xq11.2(chrX:64662965-64751122)x1
GRCh38/hg38 Xq12(chrX:67296350-67410794)x2
GRCh38/hg38 Xq12(chrX:67428035-67508792)x2
GRCh38/hg38 Xq12(chrX:67428035-67508792)x3
GRCh38/hg38 Xq13.1(chrX:71827651-71874597)x2
GRCh38/hg38 Xq13.2(chrX:73093602-73103636)x2
GRCh38/hg38 Xq21.1(chrX:81947241-82059309)x2
GRCh38/hg38 Xq21.1(chrX:81947241-82059309)x3
GRCh38/hg38 Xq21.1(chrX:84775973-84877015)x1
GRCh38/hg38 Xq21.31(chrX:87173532-87218675)x1
GRCh38/hg38 Xq21.32(chrX:94090493-94269331)x3
GRCh38/hg38 Xq21.33(chrX:95093476-95133723)x2
GRCh38/hg38 Xq21.33(chrX:95093476-95133723)x3
GRCh38/hg38 Xq21.33(chrX:95093476-95133723)x4
GRCh38/hg38 Xq21.33(chrX:95161438-95207591)x1
GRCh38/hg38 Xq21.33(chrX:95499982-95801651)x1
GRCh38/hg38 Xq21.33(chrX:95605138-95656490)x2
GRCh38/hg38 Xq21.33(chrX:95733207-95822345)x3
GRCh38/hg38 Xq21.33(chrX:96474424-96590435)x1
GRCh38/hg38 Xq22.1(chrX:99445248-99589707)x0
GRCh38/hg38 Xq22.1(chrX:99463846-99589707)x0
GRCh38/hg38 Xq23(chrX:113959540-114062899)x3
GRCh38/hg38 Xq23(chrX:116972004-117028412)x1
GRCh38/hg38 Xq23(chrX:117007957-117061129)x0
GRCh38/hg38 Xq23(chrX:117275824-117332780)x0
GRCh38/hg38 Xq25(chrX:121834293-121900058)x1
GRCh38/hg38 Xq25(chrX:125673312-125741448)x1
GRCh38/hg38 Xq25(chrX:126191293-126226243)x3
GRCh38/hg38 Xq25(chrX:127018314-127212010)x1
GRCh38/hg38 Xq25(chrX:127089919-127449867)x0
GRCh38/hg38 Xq25(chrX:127506492-127573485)x0
GRCh38/hg38 Xq25(chrX:128196443-128438818)x0
GRCh38/hg38 Xq25(chrX:128779694-128859077)x3
GRCh38/hg38 Xq27.3(chrX:144353018-144402320)x3
GRCh38/hg38 Xq27.3(chrX:144675423-144761682)x2
GRCh38/hg38 Xq27.3(chrX:145260580-145397053)x0
GRCh38/hg38 Xq27.3(chrX:145260580-145397053)x1
GRCh38/hg38 Xq27.3(chrX:146968990-147040761)x3
GRCh38/hg38 Xq28(chrX:149563232-149570094)x0
GRCh38/hg38 Xq28(chrX:149563232-149570094)x1
GRCh38/hg38 Xq28(chrX:150268325-150336715)x2
GRCh38/hg38 Xq28(chrX:155442674-155449649)x2
GRCh38/hg38 Xq28(chrX:155785125-155806648)x1
GRCh38/hg38 Yp11.2(chrY:1674587-1823312)x3
GRCh38/hg38 Yp11.2(chrY:7582476-7632698)x3
GRCh38/hg38 Yp11.2(chrY:948314-1152369)x3
GRCh38/hg38 Yp11.32(chrY:20297-233335)x3
GRCh38/hg38 Yp11.32(chrY:20297-39498)x1
GRCh38/hg38 Yp11.32(chrY:20297-39498)x3
GRCh38/hg38 Yq11.21(chrY:11466379-11728747)x2
GRCh38/hg38 Yq11.21(chrY:11520247-11589758)x2
GRCh38/hg38 Yq11.21(chrY:11520247-11589758)x3
GRCh38/hg38 Yq11.21(chrY:11520247-11727435)x2
GRCh38/hg38 Yq11.21(chrY:11549246-11589758)x3
GRCh38/hg38 Yq11.21(chrY:11549246-11699355)x2
GRCh38/hg38 Yq11.21(chrY:11567346-11589758)x2
GRCh38/hg38 Yq11.21(chrY:11567346-11589758)x3
GRCh38/hg38 Yq11.221(chrY:13988013-13991910)x3
GRCh38/hg38 Yq11.221(chrY:13988013-13992240)x2
GRCh38/hg38 Yq11.221(chrY:15000339-15525000)x4
GRCh38/hg38 Yq11.221(chrY:15159149-15172469)x2
GRCh38/hg38 Yq11.221(chrY:16162825-16443680)x2
GRCh38/hg38 Yq11.222(chrY:18799500-18864368)x3
GRCh38/hg38 Yq11.223(chrY:20367367-20397626)x3
GRCh38/hg38 Yq12(chrY:56971645-56993168)x1

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